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HIV sequence database

Alignment Slicer

Purpose: This tool cuts slices from an input alignment. See Help Page for details.

The sample input extracts the A, G, and ambiguous regions of CRF02_AG from an alignment of HIV-1.

Upload your alignment
Or enter your alignment here
Upload text file of breakpoints
Or enter breakpoints here
Breakpoints refer to: Residues of 1st sequence Alignment columns
Alignment starts at residue number
Gap characters
last modified: Tue Feb 27 10:45 2018

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