HIV Sequence Database
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Programs and Tools
Search Interface retrieves HIV and SIV sequences, which can then be aligned and used to build trees Geography Search Interface retrieves HIV sequences based on geographical distribution Genome Browser uses jBrowse to display diverse data about the HIV-1 genome and proteome Tools for working with sequences lists all our online tools, organized by function Alignments
HIV Premade Alignments includes Consensus and Ancestral Sequences, Subtype Reference Alignments, and Complete Alignments |
Information
HIV Sequence Compendium print or order our annual publication Tutorials and other information unpublished web-based content Links to other HIV/AIDS tools and information About this website
FAQ general information about this website |
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Variant Visualizer
Variant Visualizer is a new tool that provides new options and output styles for visualizing variants in an alignment of nucleotide or protein sequences. The tool is similar to Highlighter, but the Variant Visualizer has more options for refining the graphical output. The output can be refined interactively without rerunning the tool.
21 July 2021
