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HIV sequence database

How to Use these Databases

Our team often gives presentations at major HIV-related conferences. These tutorials consist of the slides used for these workshops. They cover the HIV Sequence and Immunology Databases and selected tools.

Banff Meeting, 2018

Banff 2018 sequence database workshop (11 MB PDF)

Banff 2018 immunology database workshop (13 MB PDF)

Banff sample input files (.zip)

Keystone Meeting, 2014

Keystone 2014 HIV sequence database workshop (10 MB PDF)

Keystone 2014 HIV Immunology database workshop (8 MB PDF)

Summer School on Quantitative Systems Immunology, 2013

Immunology_Database.pdf (5.6 MB)

BU_QSI_HIV_Sequence_DB.pdf (8.1 MB)

Keystone Meeting, 2013

2013_KeystonePDF.pdf (14 MB)

Conference on Retroviruses and Opportunistic Infections, 2004

DBdemoSF.pdf (12 MB)

DBdemoSF-talk.ppt (1.9 MB)

Sample input files from the workshops

GeneCutter input (FastA)

MotifScan input (FastA)

PeptGen input (FastA)

RIP input (FastA)

Treemaker input (FastA)

last modified: Wed Feb 28 14:44 2018

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