HIV Databases

The HIV databases contain comprehensive data on HIV genetic sequences and immunological epitopes. The website also gives access to a large number of tools that can be used to analyze and visualize these data. This project has been funded in whole or in part with Federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Interagency Agreement No. AAI12007-001-00000. Our content is reviewed by an Editorial Board.

HIV Molecular Immunology 2016
HIV Molecular Immunology 2016 is now available online. The PDF version is hypertext enabled and features clickable table-of-contents, indexes, references and links to external web sites. 16 June 2017

Neutralizing antibody germline genes
CATNAP (Compile, Analyze and Tally Neutralizing Antibody Panels) now includes germline gene usage, and allows you to select antibodies based on their germline genes. The entry of the germline data is still in progress. 13 June 2017

Retrovirus Integration Database
Wei Shao and colleagues at the NCI are now maintaining a database of retroviral insertion sites (Shao et al., Retrovirology 13:47, 2016), the Retrovirus Integration Database (RID). Its primary focus is HIV integration. We have added a link on our resources page. 12 June 2017

2016 Alignments
The 2016 Web and Filtered Web Alignments are now available online. These curated alignments contain a full range of sequences available through the end of 2016. 10 April 2017

Questions or comments? Contact us at seq-info@lanl.gov