HIV Databases

The HIV databases contain comprehensive data on HIV genetic sequences and immunological epitopes. The website also gives access to a large number of tools that can be used to analyze and visualize these data. This project has been funded in whole or in part with Federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Interagency Agreement No. AAI12007-001-00000. Our content is reviewed by an Editorial Board.

2017 Alignments
The 2017 Web and Filtered Web Alignments of HIV-1 and HIV-2 sequences are now available online. These curated alignments contain a full range of sequences available through the end of 2017. 11 April 2018

New option for Variable Region Characteristics
Feature data: Optionally, you can include information about the sequences in your analysis, in order to separately analyze the sequences with/without a particular feature. 08 March 2018

New Feature for Align Multi-tool: Concatenate
This will slice your alignment and/or concatenate two or more alignments (or slices). 27 February 2018

New tool: Align Multi-tool
Simple manipulations of sequence alignments, including sorting, pruning, and renaming. 07 February 2018

Questions or comments? Contact us at seq-info@lanl.gov