HIV molecular immunology database


Search the Epitope Variant and Escape Mutation Database


Found 1 matching record:

Displaying record number 61605

HXB2 Location  Gag(71-79)   Gag Epitope Map
View variants at this location
Epitope GSEELRSLY   Epitope Alignment
GSEELRSLf   escape documented in this paper; observed variant
Epitope Name A01-GY9 Gag
Species (MHC/HLA human(A*01)

Variant Details

Showing 1 of 3 variants.

Variant ID.  3975
Epitope Seq.  GSEELRSLY
Variant Seq.  GSEELRSLf
Mutations Y/F
Epitope Location Y9F
HXB2 Location Y79F
Mutation Type E: escape documented in this paper
OV: observed variant
Method Other
Note Variant GSEELRSLY, Y9F, was found in Subject 9213 haplotypes at varying frequencies on day 1543 only. This escape is at an anchor residue.


Pandit2014 Aridaman Pandit and Rob J. de Boer. Reliable Reconstruction of HIV-1 Whole Genome Haplotypes Reveals Clonal Interference and Genetic Hitchhiking among Immune Escape Variants. Retrovirology, 11:56, 4 Jul 2014. PubMed ID: 24996694. Show all entries for this paper.

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