HIV molecular immunology database


Search the Epitope Variant and Escape Mutation Database


Found 1 matching record:

Displaying record number 61605

HXB2 Location  Gag(71-79)   Gag Epitope Map
View variants at this location
Epitope GSEELRSLY   Epitope Alignment
GSEELkSLY   escape documented in this paper; observed variant
Epitope Name A01-GY9 Gag
Species (MHC/HLA human(A*01)

Variant Details

Showing 1 of 3 variants.

Variant ID.  3973
Epitope Seq.  GSEELRSLY
Variant Seq.  GSEELkSLY
Mutations R/K
Epitope Location R6K
HXB2 Location R76K
Mutation Type E: escape documented in this paper
OV: observed variant
Method Other
Note Variant GSEELkSLY, R6K, was found in Subject 9213 haplotypes at varying frequencies on days 0 and 165 only, not detected at intervening time points of days 3 and 59 and lost at later time points than d165.


Pandit2014 Aridaman Pandit and Rob J. de Boer. Reliable Reconstruction of HIV-1 Whole Genome Haplotypes Reveals Clonal Interference and Genetic Hitchhiking among Immune Escape Variants. Retrovirology, 11:56, 4 Jul 2014. PubMed ID: 24996694. Show all entries for this paper.

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