HIV molecular immunology database


Search the Epitope Variant and Escape Mutation Database


Found 1 matching record:

Displaying record number 57875

HXB2 Location  Gag(20-29)   Gag Epitope Map
View variants at this location
Epitope RLRPGGKKHY   Epitope Alignment
RLRPGGKKrY   inferred escape
Species (MHC/HLA human(B*42:01)

Variant Details

Showing 1 of 4 variants.

Variant ID.  2946
Epitope Seq.  RLRPGGKKHY
Variant Seq.  RLRPGGKKrY
Mutations H/R
Epitope Location H9R
HXB2 Location H28R
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject CAP 239 carried this escape in 4/9 sequences 18.2 months post-infection.


Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.

Questions or comments? Contact us at
Managed by Triad National Security, LLC for the U.S. Department of Energy’s National Nuclear Security Administration
Copyright © 2022 Triad National Security, LLC | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health