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HIV Molecular Immunology Database

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Found 1 matching record:

Displaying record number 56010

HXB2 Location  Gag(124-132)   Gag Epitope Map
View variants at this location
Epitope NSSQVSQNY   Epitope Alignment
Variants
NSSkVSQNY   observed variant
Epitope Name NY9(p17)
Species (MHC/HLA human

Variant Details

Showing all: 1 variant(s).


Variant ID.  1907
Epitope Seq.  NSSQVSQNY
Variant Seq.  NSSkVSQNY
Mutations Q/K
Epitope Location Q4K
HXB2 Location Q127K
Mutation Type OV: observed variant
Epitope Subtype B
Variant Subtype B
Method CD8 T-cell Elispot - IFNy, Sequence
Note This Asian B Clade optimal epitope differs from the consensus B at one position. It is predicted to be HLA-B35 restricted. Experimentally, B clade consensus peptide was used to challenge CTL response in subjects commonly carrying the Asian B-type epitope.

References

Zhai2008 Song Zhai, Yan Zhuang, Yang Song, Shu Li, Dedong Huang, Wenzhen Kang, Xinhong Li, Qi Liao, Yanhou Liu, Zhongfang Zhao, Yichen Lu, and Yongtao Sun. HIV-1-Specific Cytotoxic T Lymphocyte (CTL) Responses Against Immunodominant Optimal Epitopes Slow the Progression of AIDS in China. Curr. HIV Res., 6(4):335-350, Jun 2008. PubMed ID: 18691032. Show all entries for this paper.


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