HIV molecular immunology database


Search the Epitope Variant and Escape Mutation Database


Found 1 matching record:

Displaying record number 38

HXB2 Location  Gag(24-31)   Gag Epitope Map
View variants at this location
Epitope GGKKKYKL   Epitope Alignment
GGsKKYKL   subtype-specific non-susceptible form
Species (MHC/HLA human(B8)

Variant Details

Showing 1 of 6 variants.

Variant ID.  1108
Epitope Seq.  GGKKKYKL
Variant Seq.  GGsKKYKL
Mutations K/S
Epitope Location K3S
HXB2 Location K26S
Mutation Type SNSF: subtype-specific non-susceptible form
Epitope Subtype B
Method Chromium-release assay
Note A peptide containing this circulating Ugandan variant was not recognized by a CTL clone from a Clade B-infected patient.


McAdam1998 S. McAdam, P. Kaleebu, P. Krausa, P. Goulder, N. French, B. Collin, T. Blanchard, J. Whitworth, A. McMichael, and F. Gotch. Cross-Clade Recognition of p55 by Cytotoxic T Lymphocytes in HIV-1 Infection. AIDS, 12:571-579, 1998. PubMed ID: 9583596. Show all entries for this paper.

Questions or comments? Contact us at
Managed by Triad National Security, LLC for the U.S. Department of Energy’s National Nuclear Security Administration
Copyright © 2022 Triad National Security, LLC | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health