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Found 1 matching record:

Displaying record number 62153

HXB2 Location  Gag(161-172)   Gag Epitope Map
View variants at this location
Epitope {D}KAFSPEVIPMF   Epitope Alignment
Variants
{e}KAFSPEVIPMF   HLA association
Epitope Name KF11
Species (MHC/HLA human(B*57:03)

Variant Details

Showing all: 1 variant(s).


Variant ID.  4220
Epitope Seq.  {D}KAFSPEVIPMF
Variant Seq.  {e}KAFSPEVIPMF
Mutations D/E
Epitope Location D1E
HXB2 Location D161E
Mutation Type A: HLA association
Epitope Subtype A1, D
Variant Subtype D
Method Other
Note HLA-associated polymorphism Gag E161D is found in subtype D one position before epitope KF11, as {e}KAFSPEVIPMF.

References

Kinloch2019 Natalie N. Kinloch, Guinevere Q. Lee, Jonathan M. Carlson, Steven W. Jin, Chanson J. Brumme, Helen Byakwaga, Conrad Muzoora, Mwebesa B. Bwana, Kyle D. Cobarrubias, Peter W. Hunt, Jeff N. Martin, Mary Carrington, David R. Bangsberg, P. Richard Harrigan, Mark A. Brockman, and Zabrina L. Brumme. Genotypic and Mechanistic Characterization of Subtype-Specific HIV Adaptation to Host Cellular Immunity. J. Virol., 93(1), 1 Jan 2019. PubMed ID: 30305354. Show all entries for this paper.


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