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Found 1 matching record:

Displaying record number 62152

HXB2 Location  Gag(20-29)   Gag Epitope Map
View variants at this location
Epitope RLRPGGKKKY   Epitope Alignment
Variants
RLRPGGKKqY   HLA association
Epitope Name RY10
Species (MHC/HLA human(A*30:01)

Variant Details

Showing all: 1 variant(s).


Variant ID.  4219
Epitope Seq.  RLRPGGKKKY
Variant Seq.  RLRPGGKKqY
Mutations K/Q
Epitope Location K9Q
HXB2 Location K28Q
Mutation Type A: HLA association
Epitope Subtype A1, B, C, D
Variant Subtype A1, B, C
Method Other
Note HLA-associated polymorphism Gag K28Q is found in subtypes A1, B, C within epitope RY10 as RLRPGGKKqY.

References

Kinloch2019 Natalie N. Kinloch, Guinevere Q. Lee, Jonathan M. Carlson, Steven W. Jin, Chanson J. Brumme, Helen Byakwaga, Conrad Muzoora, Mwebesa B. Bwana, Kyle D. Cobarrubias, Peter W. Hunt, Jeff N. Martin, Mary Carrington, David R. Bangsberg, P. Richard Harrigan, Mark A. Brockman, and Zabrina L. Brumme. Genotypic and Mechanistic Characterization of Subtype-Specific HIV Adaptation to Host Cellular Immunity. J. Virol., 93(1), 1 Jan 2019. PubMed ID: 30305354. Show all entries for this paper.


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