HIV molecular immunology database
Found 1 matching record:
HXB2 Location | Gag(141-155) | Gag Epitope Map
View variants at this location |
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Epitope |
QMVHQSLSPRTLNAW
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Epitope Alignment | |||||||
Variants |
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Species (MHC/HLA) | human |
Showing all: 2 variant(s).
Variant ID. | 65 |
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Epitope Seq. | QMVHQSLSPRTLNAW |
Variant Seq. | QMtHQnLSPRTLNAW |
Mutations | V/T S/N |
Epitope Location | V3T S6N |
HXB2 Location | V143T S146N |
Mutation Type | OV: observed variant |
Method | CD8 T-cell Elispot - IFNy |
Note | The sequence contains a known B7/B8 epitope, but the subjects recognizing it are B7- and B8-negative. The viral sequences isolated from the subjects were qmThqNlsprtlnaw and qmvhqAlsprtlnaw, and the index peptide was recognized. |
Variant ID. | 66 |
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Epitope Seq. | QMVHQSLSPRTLNAW |
Variant Seq. | QMVHQaLSPRTLNAW |
Mutations | S/A |
Epitope Location | S6A |
HXB2 Location | S146A |
Mutation Type | OV: observed variant |
Method | CD8 T-cell Elispot - IFNy |
Note | The sequence contains a known B7/B8 epitope, but the subjects recognizing it are B7- and B8-negative. The viral sequences isolated from the subjects were qmThqNlsprtlnaw and qmvhqAlsprtlnaw, and the index peptide was recognized. |
Barugahare2005 Banson Barugahare, Chris Baker, Okumu K'Aluoch, Richard Donovan, Mohamed Elrefaei, Mark Eggena, Norman Jones, Steven Mutalya, Cissy Kityo, Peter Mugyenyi, and Huyen Cao. Human Immunodeficiency Virus-Specific Responses in Adult Ugandans: Patterns of Cross-Clade Recognition. J. Virol., 79(7):4132-4139, Apr 2005. PubMed ID: 15767414. Show all entries for this paper.