HIV molecular immunology database
Found 1 matching record:
| HXB2 Location | Gag(8-18) | Gag Epitope Map
View variants at this location |
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| Epitope |
LSGGELDRWEK
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Epitope Alignment | ||||
| Variants |
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| Epitope Name | Gag 1.2 | |||||
| Species (MHC/HLA) | macaque | |||||
Showing all: 1 variant(s).
| Variant ID. | 54 |
|---|---|
| Epitope Seq. | LSGGELDRWEK |
| Variant Seq. | LSGGkLDaWEK |
| Mutations | E/K R/A |
| Epitope Location | E5K R8A |
| HXB2 Location | E12K R15A |
| Mutation Type | SNSF: subtype-specific non-susceptible form |
| Epitope Subtype | B |
| Variant Subtype | CRF02_AG |
| Method | Intracellular cytokine staining, T-cell Elispot |
| Note | CRF02 form, LSGGkLDaWEK, does not cross-react with the B clade LSGGELDRWEK elicited response. |
Amara2005a Rama Rao Amara, Sunita Sharma, Milloni Patel, James M. Smith, Lakshmi Chennareddi, James G Herndon, and Harriet L. Robinson. Studies on the Cross-Clade and Cross-Species Conservation of HIV-1 Gag-Specific CD8 and CD4 T Cell Responses Elicited by a Clade B DNA/MVA Vaccine in Macaques. Virology, 334(1):124-133, 30 Mar 2005. PubMed ID: 15749128. Show all entries for this paper.