Found 1 matching record:
HXB2 Location | Env(42-52) | Env Epitope Map
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Epitope |
VPVWKEATTTL
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Epitope Alignment | ||||||||||
Variants |
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Species (MHC/HLA) | human(B35) |
Showing all: 3 variant(s).
Variant ID. | 102 |
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Epitope Seq. | VPVWKEATTTL |
Variant Seq. | VPVWKEAdTTL |
Mutations | T/D |
Epitope Location | T8D |
HXB2 Location | T49D |
Mutation Type | SSF: subtype-specific susceptible form |
Epitope Subtype | B, D |
Variant Subtype | C |
Method | Chromium-release assay |
Note | VPVWKEATTTL is the consensus sequence for clades B and D.VPVWKEAdTTL is the consensus sequence for clade C and it is cross-reactive. |
Variant ID. | 103 |
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Epitope Seq. | VPVWKEATTTL |
Variant Seq. | VPVWrdAdTTL |
Mutations | K/R E/D T/D |
Epitope Location | K5R E6D T8D |
HXB2 Location | K46R E47D T49D |
Mutation Type | SSF: subtype-specific susceptible form |
Epitope Subtype | B, D |
Variant Subtype | C |
Method | Chromium-release assay |
Note | VPVWKEATTTL is the consensus sequence for clades B and D. VPVWrdAdTTL is the consensus sequence for clade E and even with three substitutions still retains some cross-reactivity. |
Variant ID. | 2932 |
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Epitope Seq. | VPVWKEATTTL |
Variant Seq. | VPVWKdAeTTL |
Mutations | E/D T/E |
Epitope Location | E6D T8E |
HXB2 Location | E47D T49E |
Mutation Type | SSF: subtype-specific susceptible form |
Epitope Subtype | B, D |
Variant Subtype | C |
Method | Chromium-release assay |
Note | VPVWKEATTTL is the consensus sequence for clades B and D. VPVWKdAeTTL is the consensus sequence for clade A and it is cross-reactive. |
Cao1997a H. Cao, P. Kanki, J. L. Sankale, A. Dieng-Sarr, Gail P. Mazzara, S. Kalams, B. Korber, S. M'Boup, and B. D. Walker. CTL Cross-Reactivity among Different HIV-1 Clades: Implications for Vaccine Development. J. Virol., 71:8615-8623, 1997. PubMed ID: 9343219. Show all entries for this paper.
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