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Found 1 matching record:

Displaying record number 57878

HXB2 Location  Nef(13-20)   Nef Epitope Map
View variants at this location
Epitope WPAVRERI   Epitope Alignment
Variants
WPdVRERm   inferred escape
WPnVRERm   inferred escape
WPeVRERm   inferred escape
WPnVREgm   inferred escape
WPdVREkm   inferred escape
WPdVgERm   inferred escape
Species (MHC/HLA human(B*08:01)

Variant Details

Showing all: 6 variant(s).


Variant ID.  2951
Epitope Seq.  WPAVRERI
Variant Seq.  WPdVRERm
Mutations A/D I/M
Epitope Location A3D I8M
HXB2 Location A15D I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation in 11/24 sequences 2.9 months post-infection.


Variant ID.  2952
Epitope Seq.  WPAVRERI
Variant Seq.  WPnVRERm
Mutations A/N I/M
Epitope Location A3N I8M
HXB2 Location A15N I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation 1.8 months post-infection (Mo.PI) in 24/24 sequences and in 11/24 sequences 2.9 Mo.PI.


Variant ID.  2953
Epitope Seq.  WPAVRERI
Variant Seq.  WPeVRERm
Mutations A/E I/M
Epitope Location A3E I8M
HXB2 Location A15E I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation in 21/22 sequences 13.3 months post-infection.


Variant ID.  2954
Epitope Seq.  WPAVRERI
Variant Seq.  WPnVREgm
Mutations A/N R/G I/M
Epitope Location A3N R7G I8M
HXB2 Location A15N R19G I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation in 1/24 sequences 2.9 months post-infection.


Variant ID.  2955
Epitope Seq.  WPAVRERI
Variant Seq.  WPdVREkm
Mutations A/D R/K I/M
Epitope Location A3D R7K I8M
HXB2 Location A15D R19K I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation in 1/22 sequences 13.3 months post-infection.


Variant ID.  2956
Epitope Seq.  WPAVRERI
Variant Seq.  WPdVgERm
Mutations A/D R/G I/M
Epitope Location A3D R5G I8M
HXB2 Location A15D R17G I20M
Mutation Type IE: inferred escape
Epitope Subtype C
Variant Subtype C
Method Sequence
Note Subject 270 carried this mutation in 1/24 sequences 2.9 months post-infection.

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


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