HIV molecular immunology database
Found 1 matching record:
| HXB2 Location | Nef(13-20) | Nef Epitope Map
View variants at this location |
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| Epitope |
WPAVRERI
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Epitope Alignment | |||||||||||||||||||
| Variants |
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| Species (MHC/HLA) | human(B*08:01) | ||||||||||||||||||||
Showing all: 6 variant(s).
| Variant ID. | 2951 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPdVRERm |
| Mutations | A/D I/M |
| Epitope Location | A3D I8M |
| HXB2 Location | A15D I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation in 11/24 sequences 2.9 months post-infection. |
| Variant ID. | 2952 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPnVRERm |
| Mutations | A/N I/M |
| Epitope Location | A3N I8M |
| HXB2 Location | A15N I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation 1.8 months post-infection (Mo.PI) in 24/24 sequences and in 11/24 sequences 2.9 Mo.PI. |
| Variant ID. | 2953 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPeVRERm |
| Mutations | A/E I/M |
| Epitope Location | A3E I8M |
| HXB2 Location | A15E I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation in 21/22 sequences 13.3 months post-infection. |
| Variant ID. | 2954 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPnVREgm |
| Mutations | A/N R/G I/M |
| Epitope Location | A3N R7G I8M |
| HXB2 Location | A15N R19G I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation in 1/24 sequences 2.9 months post-infection. |
| Variant ID. | 2955 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPdVREkm |
| Mutations | A/D R/K I/M |
| Epitope Location | A3D R7K I8M |
| HXB2 Location | A15D R19K I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation in 1/22 sequences 13.3 months post-infection. |
| Variant ID. | 2956 |
|---|---|
| Epitope Seq. | WPAVRERI |
| Variant Seq. | WPdVgERm |
| Mutations | A/D R/G I/M |
| Epitope Location | A3D R5G I8M |
| HXB2 Location | A15D R17G I20M |
| Mutation Type | IE: inferred escape |
| Epitope Subtype | C |
| Variant Subtype | C |
| Method | Sequence |
| Note | Subject 270 carried this mutation in 1/24 sequences 2.9 months post-infection. |
Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.