HIV molecular immunology database
Found 1 matching record:
| HXB2 Location | gp160(199-207) | gp160 Epitope Map
View variants at this location |
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| Epitope |
SVITQACPK
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Epitope Alignment | |||||||
| Variants |
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| Species (MHC/HLA) | human(A*11:01) | ||||||||
Showing all: 2 variant(s).
| Variant ID. | 298 |
|---|---|
| Epitope Seq. | SVITQACPK |
| Variant Seq. | SaITQACPK |
| Mutations | V/A |
| Epitope Location | V2A |
| HXB2 Location | V200A |
| Mutation Type | OV: observed variant |
| Epitope Subtype | B |
| Variant Subtype | A, C, D |
| Note | Variant predominantly found in clades A, C and D. |
| Variant ID. | 299 |
|---|---|
| Epitope Seq. | SVITQACPK |
| Variant Seq. | SVIkQACPK |
| Mutations | T/K |
| Epitope Location | T4K |
| HXB2 Location | T202K |
| Mutation Type | SF: susceptible form |
| Epitope Subtype | B |
| Variant Subtype | CRF01_AE |
| Method | Chromium-release assay |
| Note | Variant predominantly found in clade E. There was low CTL activity in PBMC from clade E patients stimulated with this epitope variant. |
Fukada2002 Katsuhiko Fukada, Hiroko Tomiyama, Chantapong Wasi, Tomoko Matsuda, Shigeru Kusagawa, Hironori Sato, Shinichi Oka, Yutaka Takebe, and Masafumi Takiguchi. Cytotoxic T-cell Recognition of HIV-1 Cross-Clade and Clade-Specific Epitopes in HIV-1-Infected Thai and Japanese Patients. AIDS, 16(5):701-711, 29 Mar 2002. PubMed ID: 11964526. Show all entries for this paper.