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Search the Epitope Variant and Escape Mutation Database

Results for CTL/CD8+ T-Cell Epitope Variants

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MGARASVLSGG Gag(1-11) human epitope
MGARASVLSGGKLDAWEKIR Gag(1-20) human epitope
MGARASVLSGGKLDeWEKIR Gag(1-20) subtype-specific susceptible form
MGARASVLSGGKLDAWEsIR Gag(1-20) subtype-specific susceptible form
MGARASVLSGGKLDA----- Gag(1-20) non-susceptible form
MGARASVLSGGELDRWEKIR Gag(1-20) human epitope
MGARASVLSGGELDRWEKIR Gag(1-20) human epitope
    ASVLSGGEL Gag(5-13) human epitope
    ASVLSGGEL Gag(5-13) human epitope
    ASILRGGKLDK Gag(5-15) human epitope
    ASVLSGGELDRWEK Gag(5-18) human epitope
    ASVLSGGELDRWEKI Gag(5-19) human epitope
    ASVLSGGkLDaWEKI Gag(5-19) subtype-specific non-susceptible form
    ASiLrGGkLDkWEKI Gag(5-19) subtype-specific non-susceptible form
    ASVLSGGkLDkWEKI Gag(5-19) subtype-specific non-susceptible form
    ASVLSGGELDkWEKI Gag(5-19) subtype-specific non-susceptible form
    ASVLSGGKLDAWEKI Gag(5-19) human epitope
     SVLSGGQLDR Gag(6-15) A11 human epitope
     SILRGGKLDK Gag(6-15) A*74:01 human epitope
     SILRGeKLDK Gag(6-15) observed variant
     SvLRGGKLDK Gag(6-15) observed variant
     SILRGGnLDK Gag(6-15) literature escape
     SVLSGGELDKWEK Gag(6-18) A*11:01 human epitope
     SVLSGGELDRWEKI Gag(6-19) human epitope
       LSGGELDRWEK Gag(8-18) macaque epitope
       LSGGkLDaWEK Gag(8-18) subtype-specific non-susceptible form
        SGGELDKWEK Gag(9-18) A*11:01 human epitope
        SGGELDRWEKIRLRP Gag(9-23) B44, B60 human epitope
        SGGELDRWEKIRLRP Gag(9-23) human epitope
        SGGKLDAWEKIRLRP Gag(9-23) human epitope
        SGGKLDAWEKIRLRP Gag(9-23) human epitope
          GELDRWEKI Gag(11-19) B*40 human epitope
          GELDRWEKI Gag(11-19) B*40 human epitope
          GELDRWEKI Gag(11-19) B*40 human epitope
          GELDRWkKI Gag(11-19) diminished response; literature escape
          GELDRWEKI Gag(11-19) B40 human epitope
          GELDRWEKI Gag(11-19) B*40:02 human epitope
          GELDRWEKI Gag(11-19) B*40:02 human epitope
          GELDRWEKI Gag(11-19) B*49:01 human epitope
          GELDRWEKI Gag(11-19) human epitope
          GQLDRWEKI Gag(11-19) human epitope
          GeLDRWEKI Gag(11-19) observed variant
          GKLDSWEKIRLR Gag(11-22) human epitope
          GKLDaWEKIRLR Gag(11-22) subtype-specific susceptible form
          GKLDAWEKIRLR Gag(11-22) human epitope
          GELDRWEKIRLRPGGKKKYK Gag(11-30) B62 human epitope
          GELDRWEKIRLRPGGKKKYK Gag(11-30) human epitope
          GKLDAWEKIRLRPGGKKKYRL Gag(11-31) human epitope
          -----WEKIRLRPGG------ Gag(11-31) non-susceptible form; susceptible form
          GKLDAWEKIyLRPGGKKKYRL Gag(11-31) non-susceptible form; susceptible form
          GKLDkWEKIRLRPGGKKKYRL Gag(11-31) non-susceptible form; susceptible form
          ---DrWEKIRLRPGGKKKYRL Gag(11-31) non-susceptible form; susceptible form
          GKLDeWEKIRLRPGGKKKYRL Gag(11-31) non-susceptible form; susceptible form; subtype-specific susceptible form
          GKLDeWEKIRLRPGGKKKYRL Gag(11-31) non-susceptible form; susceptible form; subtype-specific susceptible form
           KLDKWEKIR Gag(12-20) A*74:01 human epitope
           ELDRWEKIRL Gag(12-21) B63 human epitope
           ELDRWEKIRL Gag(12-21) human epitope
            LDRWEKIRLRPGGKK Gag(13-27) A3, B60 human epitope
            LDRWEKIRLRPGGKK Gag(13-27) human epitope
            LDAWEKIRLRPGGKK Gag(13-27) human epitope
             DRWEKIRLRPG Gag(14-24) B*40 human epitope
             DRWEKIRLRPG Gag(14-24) B*40 human epitope
             DAWEKIRLRPG Gag(14-24) human epitope
              RWEKIRLRP Gag(15-23) A*02:05 human epitope
               WEKIRLRPGGKKKYK Gag(16-30) human epitope
                EKIRLRPGGKKYKL Gag(17-31) B27, B7 human epitope
                EKIRLRPGGKKKYRL Gag(17-31) human epitope
                EKIRLRPGGKKHYML Gag(17-31) human epitope
                EKIRLRPGGKKKYKL Gag(17-31) human epitope
                EKIRLRPGGKKKYRL Gag(17-31) human epitope
                EKIRLRPGGKKKYRL Gag(17-31) human epitope
                EKIRLRPGGKKKYRL Gag(17-31) human epitope
                EKIRLRPGGKKKYRL Gag(17-31) human epitope
                EKIRLRPGGKKKYKL Gag(17-31) human epitope
                EKIRLRPGGKKKYqL Gag(17-31) non-susceptible form; susceptible form
                EKIRLRPGGKKHYMLKHL Gag(17-34) C*17 human epitope
                EKIRLRPGGKKKYKLKHI Gag(17-34) human epitope
                EKIRLRPGGKKKYKLKHI Gag(17-34) human epitope
                EKIRLRPGGKKHYMLKHL Gag(17-34) human epitope
                EKIRLRPGGKKKYKLKHI Gag(17-34) human epitope
                EKIRLRPGGKKKYRLKHL Gag(17-34) human epitope
                EKIRLRPGGKKhYmLKHL Gag(17-34) subtype-specific susceptible form
                EKIRLRPGGKKKYKLKHI Gag(17-34) human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGn Gag(18-26) susceptible form
                 KIRLRPeGK Gag(18-26) susceptible form
                 KIkLRPGGK Gag(18-26) susceptible form
                 KIqLRPGGK Gag(18-26) susceptible form
                 KIkLRPGGr Gag(18-26) susceptible form
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGr Gag(18-26) literature escape; observed variant
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGr Gag(18-26) diminished HLA binding or increased off-rate
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 rIRLRPGGK Gag(18-26) diminished response; escape documented in this paper; non-susceptible form
                 KIRLRPGGK Gag(18-26) A*03:01 human epitope
                 KIRLRPGGK Gag(18-26) A*03:01, A3, B27 human epitope
                 KIRLRPGGK Gag(18-26) A11 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGq Gag(18-26) escape documented in this paper; processing
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGr Gag(18-26) susceptible form
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGr Gag(18-26) inferred escape
                 KIRLRPGGK{Kr} Gag(18-26) observed variant
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGr Gag(18-26) escape documented in this paper
                 rIRLRPGGr Gag(18-26) escape documented in this paper
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A3 human epitope
                 KIRLRPGGK Gag(18-26) A*30 human epitope
                 KIRLRPGGK Gag(18-26) A*69 human epitope
                 KIRLRPGGK Gag(18-26) B*27 human epitope
                 KIRLRPGGK Gag(18-26) B7 human epitope
                 KIRLRPGGK{*t} Gag(18-26) escape documented in this paper; processing
                 KIRLRPGGK Gag(18-26) B*82 human epitope
                 KIRLRPGGK Gag(18-26) human epitope
                 KIRLRPGGK Gag(18-26) human epitope
                 KIRLRPGGK Gag(18-26) human epitope
                 KIRLRPGGK Gag(18-26) human epitope
                 KIRLRPGGK Gag(18-26) human epitope
                 KIRLRPGGKK Gag(18-27) A*03 human epitope
                 KIRLRPGGKK Gag(18-27) A*03, A*11, B*07, B*27 human epitope
                 KIRLRPGGKK Gag(18-27) A*03:01 human epitope
                 KIRLRPGGKK Gag(18-27) A11 human epitope
                 KIRLRPGGKK Gag(18-27) A11 human epitope
                 KIRLRPGGKK Gag(18-27) B*27 human epitope
                 KIRLRPGGKK Gag(18-27) B*27 human epitope
                 KIRLRPGGKK Gag(18-27) B27 human epitope
                 KIRLRPGGKK Gag(18-27) B27 human epitope
                 KIRLRPGGKK Gag(18-27) B27 human epitope
                 KIRLRPGGKK Gag(18-27) B27 human epitope
                 KIRLRPGGKK Gag(18-27) B27, B35 human epitope
                 KIRLRPGGKK Gag(18-27) B*27:05 human epitope
                 KIRLRPGGKKKYKL Gag(18-31) A3 human epitope
                 KIRLRPGGKKKYKL Gag(18-31) B62 human epitope
                 KIRLRPGGKKKYKLK Gag(18-32) B*57 human epitope
                 KIRLRPGGKKKYKLK Gag(18-32) macaque epitope
                 KIRLRPGGKKKYKLKHIVWASRELE Gag(18-42) A3 human epitope
                 KIRLRPGGKKKYKLKHIVWASRELE Gag(18-42) A3 human epitope
                 KIRLRPGGKKKYKLKHIVWASRELE Gag(18-42) B62 human epitope
                  IRLRPGGKK Gag(19-27) A*03 human epitope
                  IRLRPGGKK Gag(19-27) A*30 human epitope
                  IRLRPGGKK Gag(19-27) A*68:02 human epitope
                  IRLRPGGKK Gag(19-27) B*27 human epitope
                  IRLRPGGKK Gag(19-27) B*27 human epitope
                  IRLRPGGKK Gag(19-27) B*27 human epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGKK Gag(19-27) B27 scid-hu mouse epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGGrK Gag(19-27) susceptible form
                  IRLRPGGKK Gag(19-27) B27 human epitope
                  IRLRPGrKK Gag(19-27) observed variant
                  IRLRPrrKK Gag(19-27) observed variant
                  IRkRPGGKK Gag(19-27) observed variant
                  IRLgPGGsK Gag(19-27) inferred escape
                  IRLRPGGsK Gag(19-27) inferred escape
                  IRLRPGGKK Gag(19-27) B*27:02 human epitope
                  IRLRPGGKK Gag(19-27) B*27:05 human epitope
                  IRLRPGGKK Gag(19-27) B*27:05 human epitope
                  IRLRPGGKK Gag(19-27) B*27:05 human epitope
                  IRLRPGGKK Gag(19-27) B*27:05 human epitope
                  IRLRPGGKK Gag(19-27) B*27:05 human epitope
                  IRLRPGGKK Gag(19-27) B*81 human epitope
                  IRLRPGGKK Gag(19-27) B*82 human epitope
                  IRLRPGGKK Gag(19-27) C*12 human epitope
                  IRLRPGGKK Gag(19-27) human epitope
                  IRLRPGGKK Gag(19-27) human epitope
                  IRLRPGGKK Gag(19-27) human epitope
                  IRLRPGGKK Gag(19-27) human epitope
                  IRLRPGGKK Gag(19-27) human epitope
                  IRLRPGGKKK Gag(19-28) A11, A3, B62 human epitope
                  IRLRPGGKKK Gag(19-28) human epitope
                  IRLRPGGKKK Gag(19-28) human epitope
                   RLRPGGKKK Gag(20-28) A*02:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKc Gag(20-28) escape documented in this paper
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGrKK Gag(20-28) observed variant
                   RLRPGGrKt Gag(20-28) escape documented in this paper
                   RLRPGGKKq Gag(20-28) diminished HLA binding or increased off-rate; escape documented in this paper
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKq Gag(20-28) escape documented in this paper
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKq Gag(20-28) diminished response; escape documented in this paper; non-susceptible form
                   RLRPGGKKr Gag(20-28) diminished response; escape documented in this paper; non-susceptible form
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   {rWEKI}RLRPGGKKK Gag(20-28) inferred escape
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKK Gag(20-28) A*03:01 human epitope
                   RLRPGGKKQ Gag(20-28) A*03:01 human epitope
                   RLRPGGKKk Gag(20-28) non-susceptible form
                   RLRPGGKKr Gag(20-28) diminished response; escape documented in this paper; non-susceptible form
                   RLRPGGKKK Gag(20-28) A*03:01, A3, B42, B62 human epitope
                   RLRPGGKKK Gag(20-28) A11 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RPRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKqK Gag(20-28) escape documented in this paper
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKt Gag(20-28) diminished response
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRQGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKh Gag(20-28) diminished response
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKh Gag(20-28) subtype-specific susceptible form
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKr Gag(20-28) susceptible form
                   RLRPGGKKK Gag(20-28) A3 human epitope
                   RLRPGGKKK Gag(20-28) A3, A30, A31, A68 epitope
                   RLRPGGKKK Gag(20-28) A3, A30, B42, B62 human epitope
                   RLRPGGKKq Gag(20-28) diminished response; susceptible form
                   RLRPGGKKr Gag(20-28) susceptible form
                   RLRPGGKKK Gag(20-28) A3, B7 human epitope
                   RLRPGGrKr Gag(20-28) susceptible form
                   RLRPGGKKr Gag(20-28) susceptible form
                   RLRPGGKKK Gag(20-28) A*30 human epitope
                   RLRPGGKKK Gag(20-28) A*74 human epitope
                   RLRPGGKKK Gag(20-28) B*07:02 human epitope
                   RLRPGGKKK Gag(20-28) C*01 human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKK Gag(20-28) human epitope
                   RLRPGGKKKY Gag(20-29) A*03 human epitope
                   RLRPGGKKKY Gag(20-29) A*03 human epitope
                   RLRPGGKKKY Gag(20-29) A*03 human epitope
                   RLRPGGKKKY Gag(20-29) A*03 human epitope
                   RLFPGGKKKY Gag(20-29) A*03 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKKY Gag(20-29) A*03:01 human epitope
                   RLRPGGKKqY Gag(20-29) HLA association
                   RLRPGGKKKY Gag(20-29) A*03:01, A30 human epitope
                   RLRPGGKKKY Gag(20-29) A3 human epitope
                   RLRPGGKKKY Gag(20-29) A3 human epitope
                   RLRPGGKKKK Gag(20-29) A3 human epitope
                   RLRPGGKKKKY Gag(20-29) A3 human epitope
                   RLRPGGKKKK Gag(20-29) A3 human epitope
                   RLRPGGKKKY Gag(20-29) A3 human epitope
                   RLRPGGKKhY Gag(20-29) susceptible form; subtype-specific susceptible form
                   RLRPGGKKrY Gag(20-29) susceptible form; subtype-specific susceptible form
                   RLRPGGKKqY Gag(20-29) susceptible form; subtype-specific susceptible form
                   qLRPGGKKrY Gag(20-29) susceptible form; subtype-specific susceptible form
                   RLRPGGKKKY Gag(20-29) A3, A30, B42, B62 human epitope
                   RLRPGGKKKY Gag(20-29) A*30 human epitope
                   RLRPGGKKKY Gag(20-29) A*30 human epitope
                   RLRPGGKKqY Gag(20-29) diminished response
                   RLRPGGKKrY Gag(20-29) diminished response
                   RLRPGGKKKY Gag(20-29) A*30:01 human epitope
                   RLRPGGKKqY Gag(20-29) HLA association
                   RLRPGGKKHY Gag(20-29) A*30:02 human epitope
                   RLRPGGKKKY Gag(20-29) B*15 human epitope
                   RLRPGGKKKY Gag(20-29) B*15 human epitope
                   RLRPGGKKKY Gag(20-29) B*15 human epitope
                   RLRPGGKKKY Gag(20-29) B*15:01 human epitope
                   RLRPGGKKKY Gag(20-29) B*15:40 human epitope
                   RLRPGGKKKY Gag(20-29) B42 human epitope
                   RLRPGGKKKY Gag(20-29) B42, B62 human epitope
                   RLRPGGKKHY Gag(20-29) B*42:01 human epitope
                   RLRPGGKKHY Gag(20-29) B*42:01 human epitope
                   kLRPGGKKHY Gag(20-29) inferred escape
                   kLRPGGKKrY Gag(20-29) inferred escape
                   RLRPGGKKrY Gag(20-29) inferred escape
                   RLRPGGKKqY Gag(20-29) inferred escape
                   RLRPGGKKKY Gag(20-29) B*44 human epitope
                   RLRPGGKKKY Gag(20-29) B62 human epitope
                   RLRPGGKKKY Gag(20-29) B62 human epitope
                   RLRPGGrKKY Gag(20-29) susceptible form
                   RLRPGGKKKY Gag(20-29) B62 human epitope
                   RLRPGGKKKY Gag(20-29) C*02 human epitope
                   RLRPGGKKKY Gag(20-29) C*06 human epitope
                   RLRPGGKKKY Gag(20-29) C*14 human epitope
                   RLRPGGKKKY Gag(20-29) C*16 human epitope
                   RLRPGGKKKY Gag(20-29) human epitope
                   RLRPGGKKKY Gag(20-29) human epitope
                   RLRPGGKKKY Gag(20-29) human epitope
                   RLRPGGKKKY Gag(20-29) human epitope
                   RLRPGGKKHYM Gag(20-30) human epitope
                   RLRPGGKKKYK Gag(20-30) human epitope
                   RLRPGGKKRYRL Gag(20-31) human epitope
                   RLRPGGKKkYRL Gag(20-31) subtype-specific susceptible form
                   CLRPGGKKKYKLKHIV Gag(20-35) human epitope
                    LRPGGKKKY Gag(21-29) C*06:02 human epitope
                    LRPGGKKKY Gag(21-29) human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) A11, B7 human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) A3 human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) A3 human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) B*08 human epitope
                    LRPGGKKqYKLKHIV Gag(21-35) susceptible form
                    LRPGGKKKYKLKHIV Gag(21-35) B8 human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) B8 human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) human epitope
                    LRPGGKKKYKLKHIV Gag(21-35) human epitope
                    LRPGGKKKYRLKHLV Gag(21-35) human epitope
                    LRPGGKKKYkLKHLV Gag(21-35) observed variant
                    LRPGGKKKYKLKHIV Gag(21-35) human epitope
                    LRPGGKKrYKLKHIV Gag(21-35) susceptible form
                    LRPGGKKKYrLKHlV Gag(21-35) susceptible form
                    LRPGGKKKYrLKHIV Gag(21-35) susceptible form
                    LRPGGKKKYRLKHLVWASRE Gag(21-40) Cw4 human epitope
                    LRPGGKKKYkLKHiVWASRE Gag(21-40) subtype-specific non-susceptible form
                    LRPGGKKKYKLKHIVWASRE Gag(21-40) human epitope
                    LRPGGKKKYRLKHLVWASRE Gag(21-40) human epitope
                     RPGGKKHY Gag(22-29) B42, B7 human epitope
                     RPGGKKkY Gag(22-29) diminished response
                     RPGGKKqY Gag(22-29) diminished response
                     RPGGKKHYM Gag(22-30) B*07:02 human epitope
                     RPGGKKkYk Gag(22-30) subtype-specific non-susceptible form
                     RPGGKKHYM Gag(22-30) B*07:02 human epitope
                     RPGGKKHYM Gag(22-30) B*07:02, B*42:01 human epitope
                     RPGGKKqYM Gag(22-30) escape documented in this paper; replicative capacity reduced
                     RPGGKKsYM Gag(22-30) escape documented in this paper; replicative capacity reduced
                     RPGGKKHYr Gag(22-30) escape documented in this paper; replicative capacity reduced
                     RPGGKKHYk Gag(22-30) escape documented in this paper; replicative capacity reduced
                     RPGGKKHYM Gag(22-30) B*42:01 human epitope
                     RPGGKKHYM Gag(22-30) B*42:01 human epitope
                     {IsL}RPGGKKHYM Gag(22-30) escape documented in this paper; observed variant
                     RPGGKKqYM Gag(22-30) diminished response; escape documented in this paper; observed variant
                     RPGGKKsYM Gag(22-30) diminished response; escape documented in this paper; observed variant
                     RPGGKKrYM Gag(22-30) diminished response; escape documented in this paper; observed variant
                     RPGGKKHYk Gag(22-30) diminished response; escape documented in this paper; observed variant
                     RPGGKKHYM Gag(22-30) B*42:01, B*42:02 human epitope
                     RPGGKKrYM Gag(22-30) escape documented in this paper
                     RPGGKKHYk Gag(22-30) observed variant
                     RPGGKKHYr Gag(22-30) observed variant
                     RPGGKKKKYK Gag(22-30) B7 human epitope
                     RPGGrKKrYK Gag(22-30) susceptible form
                     RPGGKKKrYK Gag(22-30) susceptible form
                     RPGGKKKKYr Gag(22-30) susceptible form
                     RPGGKKRYM Gag(22-30) human epitope
                     RPGGKKKYML Gag(22-31) B*07:02, B*42:01 human epitope
                     RPGGKKKYKL Gag(22-31) B*51:01 human epitope
                     RPGGKKKYKL Gag(22-31) B*51:01 human epitope
                     RPGGKKRYKL Gag(22-31) B7 human epitope
                     RPGGKKKYKL Gag(22-31) Cw4 human epitope
                     RPGGnKKYKL Gag(22-31) observed variant
                     RPGGKKKYKL Gag(22-31) human epitope
                      PGGKKRYRLKHL Gag(23-34) human epitope
                      PGGKKkYRLKHL Gag(23-34) subtype-specific susceptible form
                       GGKKKYKL Gag(24-31) B*08 human epitope
                       GGKKKYKL Gag(24-31) B*08 human epitope
                       GGrKKYKL Gag(24-31) reversion
                       GGKKKYKL Gag(24-31) B*08 human epitope
                       GGKKKYKL Gag(24-31) B*08 human epitope
                       GGKKKYRL Gag(24-31) B*08:01 human epitope
                       GGKKKYKL Gag(24-31) B*08:01 human epitope
                       GGrKKYKL Gag(24-31) escape documented in this paper
                       GGKKqYrL Gag(24-31) diminished HLA binding or increased off-rate; escape documented in this paper
                       GGKKKYKL Gag(24-31) B*08:01 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKf Gag(24-31) escape documented in this paper
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYrL Gag(24-31) subtype-specific non-susceptible form
                       GGnKrYrL Gag(24-31) subtype-specific non-susceptible form
                       GGKKKYqL Gag(24-31) subtype-specific non-susceptible form
                       GGKKKYrm Gag(24-31) subtype-specific non-susceptible form
                       GGsKKYKL Gag(24-31) subtype-specific non-susceptible form
                       GGKKtYqL Gag(24-31) subtype-specific non-susceptible form
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKm Gag(24-31) observed variant
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKqYKL Gag(24-31) escape documented in this paper
                       erKKqYKL Gag(24-31) observed variant
                       GGKKKYRL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) B8 human epitope
                       GGKKKYKL Gag(24-31) C*01 human epitope
                       GGKKKYKL Gag(24-31) human epitope
                       GGKKKYKL Gag(24-31) human epitope
                       GGKKKYKLK Gag(24-32) A*30 human epitope
                       GGKKKYKLK Gag(24-32) B*08 human epitope
                       GGKKKYKLK Gag(24-32) B*08 human epitope
                       GGKKKYKLK Gag(24-32) B*08:01 human epitope
                       GGKKKYKLK Gag(24-32) B*08:01 human epitope
                       GGKKKYKLK Gag(24-32) B*08:01 human epitope
                       GGKKKYKMK Gag(24-32) B*35 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGrKKYKLK Gag(24-32) escape documented in this paper; susceptible form
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYKLK Gag(24-32) B8 epitope
                       GGKKKYKLK Gag(24-32) B8 human epitope
                       GGKKKYQLK Gag(24-32) human epitope
                       GGKKKYKLK Gag(24-32) human epitope
                       GGKKKYKLKHIV Gag(24-35) B8 human epitope
                       GGKKKYKLKHIi Gag(24-35) susceptible form
                       GrKKKYKLKHIV Gag(24-35) escape documented in this paper
                       GrKKKYKfKHIV Gag(24-35) escape documented in this paper
                       rGKKrYKLKHIV Gag(24-35) observed variant
                       GGKKqYrLKHIV Gag(24-35) observed variant
                       GGKKKYqLKHIV Gag(24-35) observed variant
                       GGKKKYaLKHli Gag(24-35) observed variant
                       GGKKKYKLKHIV Gag(24-35) B8 human epitope
                       GGKKKYKLKHIVWASR Gag(24-39) human epitope
                        GKKPYMLKHL Gag(25-34) human epitope
                        GKKsYMLKHL Gag(25-34) diminished response; escape documented in this paper
                        GKKPYrLKHL Gag(25-34) diminished response; escape documented in this paper
                        GKKKYKLKHIVWASR Gag(25-39) A24, B7 human epitope
                        GKKKYKLKHIVWASR Gag(25-39) human epitope
                        GKKHYMLKHLVWASR Gag(25-39) human epitope
                        GKKHYMLKHLVWASREL Gag(25-41) C*03 human epitope
                        GKKQYKLKHIVWASRELE Gag(25-42) human epitope
                         KKHYMLKHIVWASRE Gag(26-40) human epitope
                         KKHYMLKHlVWASRE Gag(26-40) subtype-specific susceptible form
                         {g}KKkYkLKHlVWASR Gag(26-40) subtype-specific non-susceptible form
                         KKkYrLKHlVWASRE Gag(26-40) subtype-specific non-susceptible form
                         KKkYrLKHlVWASRE Gag(26-40) subtype-specific non-susceptible form
                          KRYMIKHLV Gag(27-35) human epitope
                           KYKLKHIVW Gag(28-36) A*23 human epitope
                           KYKLKHIVW Gag(28-36) A*23 human epitope
                           qYKLKHIVW Gag(28-36) susceptible form
                           KYKLKHIVW Gag(28-36) A23 human epitope
                           HYMLKHLVW Gag(28-36) A*23:01 human epitope
                           HYMLKHIVW Gag(28-36) A*23:01 human epitope
                           HYMLKHIVW Gag(28-36) A*23:01 human epitope
                           kYrLKHlVW Gag(28-36) diminished response
                           qYrmKHlVW Gag(28-36) diminished response
                           HYMLKHLVW Gag(28-36) A*23:01 human epitope
                           HYMLKHLVW Gag(28-36) A*23:01, A*24:02 human epitope
                           HYMLKHLVW Gag(28-36) A*23:01, A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24 human epitope
                           KYKLKHIVW Gag(28-36) A*24 human epitope
                           KYMLKHIVW Gag(28-36) A*24 human epitope
                           KYKLKHIVW Gag(28-36) A*24 human epitope
                           qYKLKHIVW Gag(28-36) escape documented in this paper; literature escape
                           KYRLKHIVW Gag(28-36) A*24 human epitope
                           qYRLKHvVW Gag(28-36) observed variant
                           qYRLKHIVW Gag(28-36) observed variant
                           KYRLKHvVW Gag(28-36) observed variant
                           KYKLKHIVW Gag(28-36) A*24 human epitope
                           KYKmKHlVW Gag(28-36) subtype-specific non-susceptible form
                           KYKLKHIVW Gag(28-36) A*24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYrLKHlVW Gag(28-36) escape documented in this paper; processing; susceptible form
                           qYKLKHIVW Gag(28-36) escape documented in this paper; processing; susceptible form
                           rYrLKHlVW Gag(28-36) escape documented in this paper; processing; susceptible form
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYKLKHIVW Gag(28-36) A24 human epitope
                           KYRLKHIVW Gag(28-36) A*24:02 human epitope
                           qYkLKHIVW Gag(28-36) observed variant; susceptible form
                           rYrLKHlVW Gag(28-36) observed variant; susceptible form
                           KYRLKHIVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYrLKHIVW Gag(28-36) diminished response; escape documented in this paper; non-susceptible form
                           KYqLKHIVW Gag(28-36) diminished response; escape documented in this paper; non-susceptible form; susceptible form
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           RYRLKHLVW Gag(28-36) A*24:02 human epitope
                           kYRLKHiVW Gag(28-36) observed variant; susceptible form
                           qYkLKHiVW Gag(28-36) observed variant; susceptible form
                           QYKLKHIVW Gag(28-36) A*24:02 human epitope
                           kYrLKHIVW Gag(28-36) observed variant; susceptible form
                           rYrLKHlVW Gag(28-36) observed variant; susceptible form
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           HYMLKHLVW Gag(28-36) A*24:02 human epitope
                           KYKLKHIVW Gag(28-36) A*24:02 human epitope
                           KYrLKHIVW Gag(28-36) epitope loss; literature escape
                           KYKLKHIVW Gag(28-36) A*29 human epitope
                           KYKLKHIVW Gag(28-36) A*68:02 human epitope
                           KYKLKHIVW Gag(28-36) B*35:02, B*35:03, B*53:01 human epitope
                           KYKLKHIVW Gag(28-36) B*55 human epitope
                           KYKLKHIVW Gag(28-36) C*02 human epitope
                           KYRLKHLVW Gag(28-36) Cw4 human epitope
                           KYRLKHLVW Gag(28-36) Cw4 human epitope
                           KYRLKHLVW Gag(28-36) Cw4 epitope
                           KYKLKHIVW Gag(28-36) human epitope
                           KYKLKHIVW Gag(28-36) human epitope
                           KYKLKHIVW Gag(28-36) human epitope
                           KYRLKHIVW Gag(28-36) human epitope
                           KYKLKHIVW Gag(28-36) human epitope
                           HYMLNHIVW Gag(28-36) human epitope
                           KYKLKHIVW Gag(28-36) human epitope
                           KYRLKHLVW Gag(28-36) human epitope
                           KYRLKHLVW Gag(28-36) human epitope
                           KYkLKHLVW Gag(28-36) observed variant
                           HYMLKHLVW Gag(28-36) human epitope
                           HYMLKHLVWAS Gag(28-38) human epitope
                           KYKLKHIVWASRELER Gag(28-43) human epitope
                            YKLKHIVWA Gag(29-37) human epitope
                            YRLKHLVWASRELER Gag(29-43) human epitope
                            YRLKHLVWASRELER Gag(29-43) human epitope
                            YRLKHLVWASRELER Gag(29-43) human epitope
                            YRLKHLVWASRELER Gag(29-43) human epitope
                              MKHLVWASREL Gag(31-41) A*02:06 human epitope
                              lKHiVWASREL Gag(31-41) subtype-specific susceptible form
                              LKHIVWASREL Gag(31-41) A*02:06 human epitope
                              mKHlVWASREL Gag(31-41) subtype-specific susceptible form
                              MKHLVWASRELERFA Gag(31-45) human epitope
                              LKHIVWASRELERFAVNPGL Gag(31-50) human epitope
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