This is a list of best-defined HIV CTL/CD8+ epitopes, as described by C. Brander and colleagues. This selective list of HIV epitopes is sometimes referred to as the “A list”.
This list is updated periodically. Former versions of this list can be obtained from the Archive of Best-Defined CTL Epitopes. Articles describing all releases of A-list updates are available in Review Articles.
The protein, HXB2 location, host species and HLA restriction elements of the epitopes are provided. Identical entries are shown only once. The epitope sequence is a link to the database that will provide details of all epitopes containing that sequence.
Epitope | Protein | HXB2 location | Subprotein | HXB2 DNA Contig | Subtype | Species | HLA |
---|---|---|---|---|---|---|---|
GELDRWEKI |
Gag | 11-19 | p17(11-19) | 820..846 | human | B*40:02 | |
DRWEKIRLRPG |
Gag | 14-24 | p17(14-24) | 829..861 | human | B40 | |
KIRLRPGGK |
Gag | 18-26 | p17(18-26) | 841..867 | human | A*03:01 | |
IRLRPGGKK |
Gag | 19-27 | p17(19-27) | 844..870 | B | human | B*27:05 |
RLRPGGKKK |
Gag | 20-28 | p17(20-28) | 847..873 | human | A*03:01 | |
RLRPGGKKKY |
Gag | 20-29 | p17(20-29) | 847..876 | B | human | A*03:01 |
RPGGKKHYM |
Gag | 22-30 | p17(22-30) | 853..879 | human | B*07:02 | |
RPGGKKKYKL |
Gag | 22-31 | p17(22-31) | 853..882 | B | human | B*51:01 |
GGKKKYKLK |
Gag | 24-32 | p17(24-32) | 859..885 | B | human | B*08:01 |
KYKLKHIVW |
Gag | 28-36 | p17(28-36) | 871..897 | B | human | A*24:02 |
HLVWASREL |
Gag | 33-41 | p17(33-41) | 886..912 | human | C*08:04 | |
LVWASRELERF |
Gag | 34-44 | p17(34-44) | 889..921 | human | A*30 | |
WASRELERF |
Gag | 36-44 | p17(36-44) | 895..921 | B | human | B*35:01 |
LETSEGCRQI |
Gag | 51-60 | p17(51-60) | 940..969 | human | B40 | |
ELRSLYNTV |
Gag | 74-82 | p17(74-82) | 1009..1035 | human | B*08:01 | |
RSLYNTVATLY |
Gag | 76-86 | p17(76-86) | 1015..1047 | B | human | A*30:02, B*58, B*63 |
SLYNTVATL |
Gag | 77-85 | p17(77-85) | 1018..1044 | B | human | A*02:01, A*02:02, A*02:05 |
SLYNTVATLY |
Gag | 77-86 | p17(77-86) | 1018..1047 | B | human | A*02:01 |
LYNTVATL |
Gag | 78-85 | p17(78-85) | 1021..1044 | human | C*14 | |
LYNTVATLY |
Gag | 78-86 | p17(78-86) | 1021..1047 | human | A*29:02, B*44:03 | |
TLYCVHQK |
Gag | 84-91 | p17(84-91) | 1039..1062 | human | A*11:01 | |
IEIKDTKEAL |
Gag | 92-101 | p17(92-101) | 1063..1092 | human | B*40:01 | |
NSSKVSQNY |
Gag | 124-132 | p17(124-132) | 1159..1185 | B | human | B*35:01 |
VQNLQGQMV |
Gag | 135-143 | p24(3-11) | 1192..1218 | human | B13 | |
GQMVHQAI |
Gag | 140-147 | p24(8-15) | 1207..1230 | human | B*13:02 | |
HQAISPRTL |
Gag | 144-152 | p24(12-20) | 1219..1245 | human | B*15:10 | |
QAISPRTLNAW |
Gag | 145-155 | p24(13-23) | 1222..1254 | B | human | A*25:01 |
ISPRTLNAW |
Gag | 147-155 | p24(15-23) | 1228..1254 | human | B*57:01, B*63 | |
SPRTLNAWV |
Gag | 148-156 | p24(16-24) | 1231..1257 | human | B*07:02 | |
VKVIEEKAF |
Gag | 156-164 | p24(24-32) | 1255..1281 | human | B*15:03 | |
EEKAFSPEV |
Gag | 160-168 | p24(28-36) | 1267..1293 | human | B*44:15 | |
KAFSPEVI |
Gag | 162-169 | p24(30-37) | 1273..1296 | B | human | B*57:03 |
KAFSPEVIPMF |
Gag | 162-172 | p24(30-40) | 1273..1305 | B | human | B*57:01, B*57:03, B*63 |
FSPEVIPMF |
Gag | 164-172 | p24(32-40) | 1279..1305 | human | B57 | |
EVIPMFSAL |
Gag | 167-175 | p24(35-43) | 1288..1314 | B | human | A*26:01, A*26:02, A*26:03 |
VIPMFSAL |
Gag | 168-175 | p24(36-43) | 1291..1314 | B | human | C*01:02 |
SEGATPQDL |
Gag | 176-184 | p24(44-52) | 1315..1341 | human | B*40:01 | |
TPQDLNTML |
Gag | 180-188 | p24(48-56) | 1327..1353 | B | human | B*07:02, B*39:10, B*42:01, B*81:01, C*08:02 |
TPQDLNMML |
Gag | 180-188 | p24(48-56) | 1327..1353 | A | human | B*53 |
GHQAAMQML |
Gag | 193-201 | p24(61-69) | 1366..1392 | B | human | B*15:10, B*39:01 |
KETINEEAA |
Gag | 202-210 | p24(70-78) | 1393..1419 | human | B*40:02 | |
ETINEEAAEW |
Gag | 203-212 | p24(71-80) | 1396..1425 | human | A*25:01 | |
AEWDRVHPV |
Gag | 210-218 | p24(78-86) | 1417..1443 | human | B*40:02 | |
HPVHAGPIA |
Gag | 216-224 | p24(84-92) | 1435..1461 | human | B*35:01, B7 | |
GQMREPRGSDI |
Gag | 226-236 | p24(94-104) | 1465..1497 | human | B13 | |
TSTLQEQIGW |
Gag | 240-249 | p24(108-117) | 1507..1536 | B | human | B*57:01, B*58:01 |
NPPIPVGDIY |
Gag | 253-262 | p24(121-130) | 1546..1575 | human | B*35:01 | |
PPIPVGDIY |
Gag | 254-262 | p24(122-130) | 1549..1575 | B | human | B*35:01 |
EIYKRWII |
Gag | 260-267 | p24(128-135) | 1567..1590 | B | human | B*08:01 |
RRWIQLGLQK |
Gag | 263-272 | p24(131-140) | 1576..1605 | human | B*27:03 | |
KRWIILGLNK |
Gag | 263-272 | p24(131-140) | 1576..1605 | B | human | B*27:05 |
GLNKIVRMY |
Gag | 269-277 | p24(137-145) | 1594..1620 | B | human | B*15:01, B*62 |
VRMYSPVSI |
Gag | 274-282 | p24(142-150) | 1609..1635 | human | C*18 | |
RMYSPTSI |
Gag | 275-282 | p24(143-150) | 1612..1635 | human | B*52:01 | |
YSPVSILDI |
Gag | 277-285 | p24(145-153) | 1618..1644 | CRF01_AE | human | C*01:02 |
FRDYVDRFF |
Gag | 293-301 | p24(161-169) | 1666..1692 | human | C*18 | |
FRDYVDRFYK |
Gag | 293-302 | p24(161-170) | 1666..1695 | B, D | human | B*18:01 |
RDYVDRFFKTL |
Gag | 294-304 | p24(162-172) | 1669..1701 | A | human | A*24:02 |
RDYVDRFYKTL |
Gag | 294-304 | p24(162-172) | 1669..1701 | B | human | B*44:02 |
YVDRFYKTL |
Gag | 296-304 | p24(164-172) | 1675..1701 | human | A*02:07 | |
YVDRFFKTL |
Gag | 296-304 | p24(164-172) | 1675..1701 | human | B*15:03, C*03:03, C*03:04 | |
DRFYKTLRA |
Gag | 298-306 | p24(166-174) | 1681..1707 | B | human | B*14:02 |
AEQASQDVKNW |
Gag | 306-316 | p24(174-184) | 1705..1737 | B | human | B*44:02 |
AEQASQEVKNWM |
Gag | 306-317 | p24(174-185) | 1705..1740 | human | Cw5 | |
QASQEVKNW |
Gag | 308-316 | p24(176-184) | 1711..1737 | B | human | B*53:01, B*57:01, B*58:01 |
VKNWMTETL |
Gag | 313-321 | p24(181-189) | 1726..1752 | B | human | B*48:01 |
DCKTILKAL |
Gag | 329-337 | p24(197-205) | 1774..1800 | B | human | B*08:01 |
ACQGVGGPGHK |
Gag | 349-359 | p24(217-227) | 1834..1866 | human | A*11:01 | |
GPGHKARVL |
Gag | 355-363 | p24(223-231) | 1852..1878 | B | human | B*07:02 |
AEAMSQVTNS |
Gag | 364-373 | p2p7p1p6(1-10) | 1879..1908 | human | B*45:01 | |
CRAPRKKGC |
Gag | 405-413 | p2p7p1p6(42-50) | 2002..2028 | human | B14 | |
APRKKGCWK |
Gag | 407-415 | p2p7p1p6(44-52) | 2008..2034 | human | B*07:02 | |
TERQANFL |
Gag | 427-434 | p2p7p1p6(64-71) | 2068..2091 | human | B*40:02 | |
RQANFLGKI |
Gag | 429-437 | p2p7p1p6(66-74) | 2074..2100 | B | human | B*48:01, B13 |
FLGKIWPSYK |
Gag | 433-442 | p2p7p1p6(70-79) | 2086..2115 | human | A*02:01 | |
KELYPLTSL |
Gag | 481-489 | p2p7p1p6(118-126) | 2230..2256 | human | B*40:01 | |
NSPTRREL |
Pol | 24-31 | Gag/Pol-TF(24-31) | 2154..2177 | human | C*01:02 | |
ITLWQRPLV |
Pol | 59-67 | Protease(3-11) | 2259..2285 | A, B, D | human | A*68:02, A*74:01 |
DTVLEEWNL |
Pol | 86-94 | Protease(30-38) | 2340..2366 | D | human | A*68:02 |
EEMNLPGRW |
Pol | 90-98 | Protease(34-42) | 2352..2378 | human | B44 | |
RQYDQILIEI |
Pol | 113-122 | Protease(57-66) | 2421..2450 | human | B13 | |
GKKAIGTVL |
Pol | 124-132 | Protease(68-76) | 2454..2480 | human | B*15:03 | |
KAIGTVLV |
Pol | 126-133 | Protease(70-77) | 2460..2483 | human | B57 | |
LVGPTPVNI |
Pol | 132-140 | Protease(76-84) | 2478..2504 | human | A*02:01 | |
TPVNIIGRNML |
Pol | 136-146 | Protease(80-90) | 2490..2522 | human | B81 | |
FPISPIETV |
Pol | 155-163 | Protease(99)-RT(8) | 2547..2573 | B | human | B*54:01 |
IETVPVKL |
Pol | 160-167 | RT(5-12) | 2562..2585 | human | B*40:01 | |
GPKVKQWPL |
Pol | 173-181 | RT(18-26) | 2601..2627 | B | human | B*08:01 |
ALVEICTEM |
Pol | 188-196 | RT(33-41) | 2646..2672 | B | human | A*02:01 |
ALVEICTEMEK |
Pol | 188-198 | RT(33-43) | 2646..2678 | human | A*03:01 | |
KLVDFRELNK |
Pol | 228-237 | RT(73-82) | 2766..2795 | human | A*03:01 | |
GIPHPAGLK |
Pol | 248-256 | RT(93-101) | 2826..2852 | B | human | A*03:01 |
TVLDVGDAY |
Pol | 262-270 | RT(107-115) | 2868..2894 | human | B*35:01 | |
SVPLDEGFRK |
Pol | 272-281 | RT(117-126) | 2898..2927 | human | A*11:01 | |
VPLDEDFRKY |
Pol | 273-282 | RT(118-127) | 2901..2930 | human | B*35:01 | |
YTAFTIPSV |
Pol | 282-290 | RT(127-135) | 2928..2954 | human | A2 | |
YTAFTIPSI |
Pol | 282-290 | RT(127-135) | 2928..2954 | human | A*02:06 | |
TAFTIPSI |
Pol | 283-290 | RT(128-135) | 2931..2954 | human | B*51:01 | |
NETPGIRYQY |
Pol | 292-301 | RT(137-146) | 2958..2987 | human | B18 | |
IRYQYNVL |
Pol | 297-304 | RT(142-149) | 2973..2996 | human | B*14:01 | |
IRYQYNVLP |
Pol | 297-305 | RT(142-150) | 2973..2999 | human | B*73 | |
LPQGWKGSPA |
Pol | 304-313 | RT(149-158) | 2994..3023 | B | human | B*54:01 |
SPAIFQSSM |
Pol | 311-319 | RT(156-164) | 3015..3041 | human | B7 | |
SPAIFQSSMTK |
Pol | 311-321 | RT(156-166) | 3015..3047 | human | A*11:01, B*07:02 | |
AIFQSSMTK |
Pol | 313-321 | RT(158-166) | 3021..3047 | B | human | A*03:01, A*11:01 |
KQNPDIVIY |
Pol | 328-336 | RT(173-181) | 3066..3092 | B | human | A*30:02, C*12:02 |
NPEIVIYQY |
Pol | 330-338 | RT(175-183) | 3072..3098 | human | B18 | |
HPDIVIYQY |
Pol | 330-338 | RT(175-183) | 3072..3098 | B | human | B*35:01 |
EIVIYQYMD |
Pol | 332-340 | RT(177-185) | 3078..3104 | human | B*18:01 | |
VIYQYMDDL |
Pol | 334-342 | RT(179-187) | 3084..3110 | B | human | A*02:01 |
VIYQYMDDLYV |
Pol | 334-344 | RT(179-189) | 3084..3116 | human | A*02:01 | |
IEELRQHLL |
Pol | 357-365 | RT(202-210) | 3153..3179 | B | human | B*40:01 |
IVLPEKDSW |
Pol | 399-407 | RT(244-252) | 3279..3305 | human | B*57:01 | |
LVGKLNWASQIY |
Pol | 415-426 | RT(260-271) | 3327..3362 | human | B*15:01 | |
KLNWASQIY |
Pol | 418-426 | RT(263-271) | 3336..3362 | B | human | A*30:02 |
QIYPGIKVR |
Pol | 424-432 | RT(269-277) | 3354..3380 | B | human | A*03:01 |
YPGIKVRQL |
Pol | 426-434 | RT(271-279) | 3360..3386 | B | human | B*42:01 |
IPLTEEAEL |
Pol | 448-456 | RT(293-301) | 3426..3452 | human | B*35:01, B*51:01 | |
ILKEPVHGV |
Pol | 464-472 | RT(309-317) | 3474..3500 | B | human | A*02:01 |
ILKEPVHGVY |
Pol | 464-473 | RT(309-318) | 3474..3503 | B | human | B*15:01, C*12:02 |
GQGQWTYQI |
Pol | 488-496 | RT(333-341) | 3546..3572 | human | B13 | |
IYQEPFKNLK |
Pol | 496-505 | RT(341-350) | 3570..3599 | B | human | A*11:01 |
RMRGAHTNDV |
Pol | 511-520 | RT(356-365) | 3615..3644 | human | A*30:02 | |
RMRGAHTNDVK |
Pol | 511-521 | RT(356-366) | 3615..3647 | human | A*03:01 | |
IAMESIVIW |
Pol | 530-538 | RT(375-383) | 3672..3698 | human | B*58:01 | |
PIQKETWETW |
Pol | 547-556 | RT(392-401) | 3723..3752 | B | human | A*32:01 |
GAETFYVDGA |
Pol | 591-600 | RT(436-445) | 3855..3884 | human | A*68:02 | |
ETFYVDGA |
Pol | 593-600 | RT(438-445) | 3861..3884 | human | A*68:02 | |
ETFYVDGAANR |
Pol | 593-603 | RT(438-448) | 3861..3893 | human | A66 | |
ETKLGKAGY |
Pol | 604-612 | RT(449-457) | 3894..3920 | human | A*26:01 | |
IVTDSQYAL |
Pol | 650-658 | RT(495-503) | 4032..4058 | human | C*08:02 | |
VTDSQYAL |
Pol | 651-658 | RT(496-503) | 4035..4058 | human | C*08 | |
VTDSQYALGI |
Pol | 651-660 | RT(496-505) | 4035..4064 | human | B*15:03 | |
QIIEQLIKK |
Pol | 675-683 | RT(520-528) | 4107..4133 | B | human | A*11:01 |
KLVSQGIRKV |
Pol | 705-714 | RT(550-559) | 4197..4226 | human | A*02:01 | |
LFLDGIDKA |
Pol | 715-723 | RT(560)-Integrase(8) | 4227..4253 | human | B81 | |
LPPIVAKEI |
Pol | 743-751 | Integrase(28-36) | 4311..4337 | human | B*42:01 | |
THLEGKIIL |
Pol | 781-789 | Integrase(66-74) | 4425..4451 | human | B*15:10 | |
HVASGYIEA |
Pol | 793-801 | Integrase(78-86) | 4461..4487 | B | human | B*54:01 |
IEAEVIPAET |
Pol | 799-808 | Integrase(84-93) | 4479..4508 | B | human | B*40:02 |
HTDNGSNF |
Pol | 829-836 | Integrase(114-121) | 4569..4592 | human | C*05 | |
HTDNGSNFT |
Pol | 829-837 | Integrase(114-122) | 4569..4595 | human | C*05 | |
STTVKAACWW |
Pol | 838-847 | Integrase(123-132) | 4596..4625 | human | B57 | |
IQQEFGIPY |
Pol | 850-858 | Integrase(135-143) | 4632..4658 | human | B*15:03 | |
VRDQAEHL |
Pol | 880-887 | Integrase(165-172) | 4722..4745 | human | C*18 | |
KTAVQMAVF |
Pol | 888-896 | Integrase(173-181) | 4746..4772 | human | B*57:01 | |
AVFIHNFKRK |
Pol | 894-903 | Integrase(179-188) | 4764..4793 | B | human | A*03:01, A*11:01 |
FKRKGGIGGY |
Pol | 900-909 | Integrase(185-194) | 4782..4811 | human | B*15:03 | |
KRKGGIGGY |
Pol | 901-909 | Integrase(186-194) | 4785..4811 | human | B*27:05 | |
GERIVDII |
Pol | 912-919 | Integrase(197-204) | 4818..4841 | B | human | B*40:02 |
IIATDIQTK |
Pol | 918-926 | Integrase(203-211) | 4836..4862 | B | human | A*11 |
LQKQITKI |
Pol | 928-935 | Integrase(213-220) | 4866..4889 | human | B*52:01 | |
KIQNFRVYY |
Pol | 934-942 | Integrase(219-227) | 4884..4910 | human | A*30:02 | |
YRDSRDPLW |
Pol | 942-950 | Integrase(227-235) | 4908..4934 | human | B*38 | |
VVPRRKAKII |
Pol | 974-983 | Integrase(259-268) | 5004..5033 | human | B*08:01 | |
VPRRKAKII |
Pol | 975-983 | Integrase(260-268) | 5007..5033 | human | B42 | |
RKAKIIRDY |
Pol | 978-986 | Integrase(263-271) | 5016..5042 | human | B*15:03 | |
RKAKIIRDYGK |
Pol | 978-988 | Integrase(263-273) | 5016..5048 | human | B*08:01 | |
KIIRDYGK |
Pol | 981-988 | Integrase(266-273) | 5025..5048 | human | B*08:01 | |
IIKDYGKQM |
Pol | 982-990 | Integrase(267-275) | 5028..5054 | human | B*42:01 | |
RIRTWKSLVK |
Vif | 17-26 | 5089..5118 | B | human | A*03:01 | |
IRTWKSLVK |
Vif | 18-26 | 5092..5118 | human | A*30:01 | ||
IRTWKSLVKH |
Vif | 18-27 | 5092..5121 | human | B*27:05 | ||
HMYISKKAK |
Vif | 28-36 | 5122..5148 | human | A*03:01 | ||
ISKKAKGWF |
Vif | 31-39 | 5131..5157 | human | B*57:01 | ||
HPRVSSEVHI |
Vif | 48-57 | 5182..5211 | human | B*07:02 | ||
IPLGDAKLII |
Vif | 57-66 | 5209..5238 | human | B51 | ||
WHLGHGVSI |
Vif | 79-87 | 5275..5301 | human | B*15:10 | ||
WHLGQGVSI |
Vif | 79-87 | 5275..5301 | human | B*38:01 | ||
LGHGVSIEW |
Vif | 81-89 | 5281..5307 | human | B*57:03 | ||
IEWRLRRY |
Vif | 87-94 | 5299..5322 | human | B*18:01 | ||
LADQLIHLHY |
Vif | 102-111 | 5344..5373 | human | B*18:01 | ||
KTKPPLPSVKK |
Vif | 158-168 | 5512..5544 | human | A*03:01 | ||
EAVRHFPRI |
Vpr | 29-37 | 5643..5669 | human | B51 | ||
AVRHFPRIW |
Vpr | 30-38 | 5646..5672 | human | B*57:01 | ||
VRHFPRIWL |
Vpr | 31-39 | 5649..5675 | human | B27 | ||
FPRIWLHGL |
Vpr | 34-42 | 5658..5684 | human | B*07:02, B*81:01 | ||
ETYGDTWTGV |
Vpr | 48-57 | 5700..5729 | human | A*68:02 | ||
DTWAGVEAIIR |
Vpr | 52-62 | 5712..5744 | human | A*68:01 | ||
AIIRILQQL |
Vpr | 59-67 | 5733..5759 | B | human | A*02:01 | |
CCFHCQVC |
Tat | 30-37 | 5918..5941 | human | C*12 | ||
FQTKGLGISY |
Tat | 38-47 | 5942..5971 | human | B*15:03 | ||
ITKGLGISYGR |
Tat | 39-49 | 5945..5977 | human | A*68:01 | ||
EELLKTVRL |
Rev | 10-18 | 5997..6023 | human | B*44:02, B*44:03 | ||
KAVRLIKFLY |
Rev | 14-23 | 6009..6038 | B | human | B*57:01, B*58:01, B*63 | |
QAVRIIKILY |
Rev | 14-23 | 6009..6038 | C | human | B*57:03 | |
ERILSTYLGR |
Rev | 57-66 | 8471..8500 | human | A*03:01 | ||
RPAEPVPLQL |
Rev | 66-75 | 8498..8527 | human | B7 | ||
SAEPVPLQL |
Rev | 67-75 | 8501..8527 | B | human | C*05:01 | |
YRLGVGALI |
Vpu | 5-13 | 6074..6100 | C | human | C*18 | |
EYRKILRQR |
Vpu | 29-37 | 6146..6172 | human | A*33:03 | ||
RVKEKYQHL |
Env | 2-10 | gp120(2-10) | 6228..6254 | human | B*08:01 | |
AENLWVTVY |
Env | 31-39 | gp120(31-39) | 6315..6341 | human | B*18:01, B44 | |
AENLWVTVYY |
Env | 31-40 | gp120(31-40) | 6315..6344 | human | B*44:02 | |
TVYYGVPVWK |
Env | 37-46 | gp120(37-46) | 6333..6362 | B | human | A*03:01 |
VPVWKEATTT |
Env | 42-51 | gp120(42-51) | 6348..6377 | human | B*55:01 | |
VPVWKEATTTL |
Env | 42-52 | gp120(42-52) | 6348..6380 | human | B*35:01 | |
LFCASDAKAY |
Env | 52-61 | gp120(52-61) | 6378..6407 | B | human | A*24:02 |
KAYETEVHNVW |
Env | 59-69 | gp120(59-69) | 6399..6431 | human | B*58 | |
YETEVHNVW |
Env | 61-69 | gp120(61-69) | 6405..6431 | human | B*18:01 | |
DPNPQEVVL |
Env | 78-86 | gp120(78-86) | 6456..6482 | human | B*35:01 | |
MHEDIISLW |
Env | 104-112 | gp120(104-112) | 6534..6560 | human | B*38:01 | |
SVITQACPK |
Env | 199-207 | gp120(199-207) | 6819..6845 | human | A*11:01 | |
SFEPIPIHY |
Env | 209-217 | gp120(209-217) | 6849..6875 | B | human | A*29:02 |
CAPAGFAIL |
Env | 218-226 | gp120(218-226) | 6876..6902 | human | C*01 | |
RPNNNTRKSI |
Env | 298-307 | gp120(298-307) | 7116..7145 | B | human | B*07:02 |
HIGPGRAFY |
Env | 310-318 | gp120(310-318) | 7152..7178 | human | A*30:02 | |
RGPGRAFVTI |
Env | 311-320 | gp120(311-320) | 7155..7184 | human | A*02:01 | |
EIIGDIRQAY |
Env | 321-330 | gp120(321-330) | 7185..7214 | human | A*25:01 | |
SFNCGGEFF |
Env | 375-383 | gp120(375-383) | 7347..7373 | B | human | B*15:16, C*04:01 |
LPCRIKQII |
Env | 416-424 | gp120(416-424) | 7470..7496 | B | human | B*51:01 |
RIKQIINMW |
Env | 419-427 | gp120(419-427) | 7479..7505 | B | human | A*32:01 |
RAIEAQQHL |
Env | 557-565 | gp41(46-54) | 7893..7919 | human | C*03:04, C*15 | |
RAIEAQQHM |
Env | 557-565 | gp41(46-54) | 7893..7919 | human | C*08 | |
QTRVLAIERYL |
Env | 577-587 | gp41(66-76) | 7953..7985 | C | human | B*58:02 |
ERYLKDQQL |
Env | 584-592 | gp41(73-81) | 7974..8000 | human | B*14:02 | |
RYLKDQQLL |
Env | 585-593 | gp41(74-82) | 7977..8003 | B | human | A*24:02, A23 |
YLKDQQLL |
Env | 586-593 | gp41(75-82) | 7980..8003 | human | B*08:01 | |
TAVPWNASW |
Env | 606-614 | gp41(95-103) | 8040..8066 | B | human | B*35:01 |
VFAVLSIVNR |
Env | 698-707 | gp41(187-196) | 8316..8345 | human | A*33:03 | |
IVNRNRQGY |
Env | 704-712 | gp41(193-201) | 8334..8360 | B | human | A*30:02 |
RLRDLLLIVTR |
Env | 770-780 | gp41(259-269) | 8532..8564 | B | human | A*03:01, A*31:01 |
IVTRIVELL |
Env | 777-785 | gp41(266-274) | 8553..8579 | B | human | A*68:02 |
GRRGWEALKY |
Env | 786-795 | gp41(275-284) | 8580..8609 | B | human | B*27:05 |
RRGWEVLKY |
Env | 787-795 | gp41(276-284) | 8583..8609 | human | A*01:01 | |
KYCWNLLQY |
Env | 794-802 | gp41(283-291) | 8604..8630 | B | human | A*30:02 |
QELKNSAVSL |
Env | 805-814 | gp41(294-303) | 8637..8666 | B | human | B*40:01 |
SLLNATDIAV |
Env | 813-822 | gp41(302-311) | 8661..8690 | B | human | A*02:01 |
LLNATDIAV |
Env | 814-822 | gp41(303-311) | 8664..8690 | B | human | A*02:01 |
EVAQRAYR |
Env | 831-838 | gp41(320-327) | 8715..8738 | human | A*33:03 | |
IPRRIRQGL |
Env | 843-851 | gp41(332-340) | 8751..8777 | B | human | B*07:02 |
RIRQGLERA |
Env | 846-854 | gp41(335-343) | 8760..8786 | human | A*02:05 | |
RQGLERALL |
Env | 848-856 | gp41(337-345) | 8766..8792 | human | B8 | |
WPTVRERM |
Nef | 13-20 | 8833..8856 | B | human | B*08:01 | |
RMRRAEPAA |
Nef | 19-27 | 8851..8877 | human | B62 | ||
LEKHGAITS |
Nef | 37-45 | 8905..8931 | human | B*40:01, B50 | ||
FPVTPQVPL |
Nef | 68-76 | 8998..9024 | human | B*07:02 | ||
FPVTPQVPLR |
Nef | 68-77 | 8998..9027 | B | human | B*07:02 | |
TPQVPLRPM |
Nef | 71-79 | 9007..9033 | B | human | B*07:02 | |
RPQVPLRPM |
Nef | 71-79 | 9007..9033 | human | B*42:01, B*42:02 | ||
RPQVPLRPMTY |
Nef | 71-81 | 9007..9039 | B | human | B35 | |
QVPLRPMTYK |
Nef | 73-82 | 9013..9042 | B | human | A*03:01, A*11:01 | |
VPLRPMTY |
Nef | 74-81 | 9016..9039 | B | human | B*35:01 | |
PLRPMTYK |
Nef | 75-82 | 9019..9042 | B | human | A*11:01 | |
LRPMTYKAA |
Nef | 76-84 | 9022..9048 | B | human | B*27:03 | |
RPMTYKAAL |
Nef | 77-85 | 9025..9051 | B | human | B*07:02 | |
KAAFDLSFF |
Nef | 82-90 | 9040..9066 | human | B*57:03, B*58:01 | ||
KAAVDLSHFL |
Nef | 82-91 | 9040..9069 | human | Cw8 | ||
GAFDLSFFL |
Nef | 83-91 | 9043..9069 | human | A*02:05 | ||
AAVDLSHFL |
Nef | 83-91 | 9043..9069 | B | human | B*58, B14, C*08:02 | |
AAFDLSFFL |
Nef | 83-91 | 9043..9069 | human | B*57:03 | ||
AALDLSHFL |
Nef | 83-91 | 9043..9069 | human | Cw3 | ||
AVDLSHFLK |
Nef | 84-92 | 9046..9072 | B | human | A*03:01, A*11:01 | |
FLKEKGGL |
Nef | 90-97 | 9064..9087 | B | human | B*08:01 | |
KEKGGLEGL |
Nef | 92-100 | 9070..9096 | B | human | B*40:01, B*40:02 | |
KEKGGLEGLIY |
Nef | 92-102 | 9070..9102 | human | B*44:03 | ||
RRQDILDLWI |
Nef | 105-114 | 9109..9138 | B | human | B*27:05 | |
RRQDILDLWVY |
Nef | 105-115 | 9109..9141 | human | B18 | ||
KRQEILDLWVY |
Nef | 105-115 | 9109..9141 | human | C*07 | ||
RQDILDLWI |
Nef | 106-114 | 9112..9138 | human | B13 | ||
RQDILDLWV |
Nef | 106-114 | 9112..9138 | human | B*13:02 | ||
QEILDLWVY |
Nef | 107-115 | 9115..9141 | human | B*44:02, B*44:03 | ||
HTQGYFPDW |
Nef | 116-124 | 9142..9168 | human | B*57:03, B*58:01, B57 | ||
TQGYFPDWQNY |
Nef | 117-127 | 9145..9177 | B | human | B*15:01 | |
GYFPDWQNY |
Nef | 119-127 | 9151..9177 | human | B*58, C*02 | ||
YFPDWQNYT |
Nef | 120-128 | 9154..9180 | B | human | A29, B*35:01, C*06, Cw6 | |
FPDWQNYTP |
Nef | 121-129 | 9157..9183 | B | human | B*54:01 | |
NYTPGPGIRY |
Nef | 126-135 | 9172..9201 | human | A*24:02 | ||
YTPGPGIRY |
Nef | 127-135 | 9175..9201 | human | B*63, B57 | ||
TPGPGVRYPL |
Nef | 128-137 | 9178..9207 | B | human | B*07:02, B*42:01, B*42:02 | |
TRYPLTFGW |
Nef | 133-141 | 9193..9219 | human | A33 | ||
RYPLTFGW |
Nef | 134-141 | 9196..9219 | B | human | A*24:02 | |
RYPLTFGWCY |
Nef | 134-143 | 9196..9225 | human | A*24:02, C*07 | ||
YPLTFGWCY |
Nef | 135-143 | 9199..9225 | B | human | B*18:01, B*53:01 | |
YPLTFGWCF |
Nef | 135-143 | 9199..9225 | human | B53 | ||
PLTFGWCYKL |
Nef | 136-145 | 9202..9231 | B | human | A*02:01 | |
LTFGWCFKL |
Nef | 137-145 | 9205..9231 | human | B*63, B57 | ||
VLEWRFDSRL |
Nef | 180-189 | 9334..9363 | B | human | A*02:01 | |
WRFDSRLAF |
Nef | 183-191 | 9343..9369 | human | B*15:03 | ||
SRLAFHHMA |
Nef | 187-195 | 9355..9381 | human | B8 |