HIV molecular immunology database
Found 12 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(139-153) p24(7-21) DNA(1204..1248) |
Gag Epitope Map |
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Author Location | Gag(171-) | |
Epitope |
QGQMVHQAISPRTLN
|
Epitope Alignment
|
Epitope Name | Gag171 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
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Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
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HXB2 Location | Gag(259-273) p24(127-141) DNA(1564..1608) |
Gag Epitope Map |
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Author Location | Gag(294-) | |
Epitope |
GEIYKRWIILGLNKI
|
Epitope Alignment
|
Epitope Name | Gag294 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
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HXB2 Location | Gag(263-277) p24(131-145) DNA(1576..1620) |
Gag Epitope Map |
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Author Location | Gag(298-) | |
Epitope |
KRWIILGLNKIVRMY
|
Epitope Alignment
|
Epitope Name | Gag298 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
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HXB2 Location | Pol(279-293) RT(124-138) DNA(2919..2963) |
Pol Epitope Map |
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Author Location | Pol(303-) | |
Epitope |
FRKYTAFTIPSINNE
|
Epitope Alignment
|
Epitope Name | Pol303 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
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HXB2 Location | Pol(311-325) RT(156-170) DNA(3015..3059) |
Pol Epitope Map |
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Author Location | Pol(335-) | |
Epitope |
SPAIFQSSMTKILEP
|
Epitope Alignment
|
Epitope Name | Pol335 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(592-606) RT(437-451) DNA(3858..3902) |
Pol Epitope Map |
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Author Location | Pol(619-) | |
Epitope |
AETFYVDGAANRETK
|
Epitope Alignment
|
Epitope Name | Pol619 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(684-698) RT(529-543) DNA(4134..4178) |
Pol Epitope Map |
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Author Location | Pol(711-) | |
Epitope |
EKVYLAWVPAHKGIG
|
Epitope Alignment
|
Epitope Name | Pol711 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(685-699) RT(530-544) DNA(4137..4181) |
Pol Epitope Map |
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Author Location | Pol(712-) | |
Epitope |
KVYLAWVPAHKGIGG
|
Epitope Alignment
|
Epitope Name | Pol712 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(888-902) Integrase(173-187) DNA(4746..4790) |
Pol Epitope Map |
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Author Location | Pol(915-) | |
Epitope |
KTAVQMAVFIHNFKR
|
Epitope Alignment
|
Epitope Name | Pol915 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(929-943) Integrase(214-228) DNA(4869..4913) |
Pol Epitope Map |
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Author Location | Pol(956-) | |
Epitope |
QKQITKIQNFRVYYR
|
Epitope Alignment
|
Epitope Name | Pol956 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vpu(30-44) DNA(6149..6193) |
Vpu Epitope Map |
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Author Location | Vpu(31-) | |
Epitope |
YRKILRQRKIDRLID
|
Epitope Alignment
|
Epitope Name | Vpu31 | |
Species (MHC/HLA) | transgenic mouse(DR) | |
Immunogen | vaccine | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | vaccine-induced immune responses, vaccine antigen design |
Vaccine type | polyepitope |
---|---|
Vaccine component | Env, Gag, Pol, Vpu |
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | HIV-1 | HIV-1 Epitope Map |
---|---|---|
Author Location | ||
Epitope |
|
|
Subtype | B, multiple | |
Species (MHC/HLA) | human(DR1, DR4, DR7) | |
Immunogen | vaccine | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining | |
Keywords | vaccine-induced immune responses |
Vaccine type | DNA prime with modified vaccinia Ankara (MVA) boost |
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Vaccine strain | B clade, multiple epitope immunogen, other |
Gorse2012 Geoffrey J. Gorse, Mark J. Newman, Allan deCamp, Christine Mhorag Hay, Stephen C. De Rosa, Elizabeth Noonan, Brian D. Livingston, Jonathan D. Fuchs, Spyros A. Kalams, Farah L. Cassis-Ghavami, and NIAID HIV Vaccine Trials Network. DNA and Modified Vaccinia Virus Ankara Vaccines Encoding Multiple Cytotoxic and Helper T-Lymphocyte Epitopes of Human Immunodeficiency Virus Type 1 (HIV-1) Are Safe but Weakly Immunogenic in HIV-1-Uninfected, Vaccinia Virus-Naive Adults. Clin. Vaccine Immunol., 19(5):649-658, May 2012. PubMed ID: 22398243. Show all entries for this paper.
Jin2009 Xia Jin, Mark J Newman, Stephen De-Rosa, Cristine Cooper, Evan Thomas, Michael Keefer, Jonathan Fuchs, William Blattner, Brian D. Livingston, Denise M. McKinney, Elizabeth Noonan, Allan deCamp, Olivier D. Defawe, Margaret Wecker, and NIAID HIV Vaccine Trials Network. A Novel HIV T Helper Epitope-Based Vaccine Elicits Cytokine-Secreting HIV-Specific CD4+ T Cells in a Phase I Clinical Trial in HIV-Uninfected Adults. Vaccine, 27(50):7080-7086, 23 Nov 2009. PubMed ID: 19786145. Show all entries for this paper.
Walker2009 Leslie E. Walker, Lo Vang, Xuefei Shen, Brian D. Livingston, Penny Post, Alessandro Sette, C. Steven Godin, and Mark J. Newman. Design and Preclinical Development of a Recombinant Protein and DNA Plasmid Mixed Format Vaccine to Deliver HIV-Derived T-Lymphocyte Epitopes. Vaccine, 27(50):7087-7095, 23 Nov 2009. PubMed ID: 19786132. Show all entries for this paper.