Found 40 matching records:
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HXB2 Location | Gag(1-18) p17(1-18) DNA(790..843) |
Gag Epitope Map |
---|---|---|
Author Location | p17(1-18 B consensus) | |
Epitope |
MGARASVLSGGELDRWEK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(9-26) p17(9-26) DNA(814..867) |
Gag Epitope Map |
---|---|---|
Author Location | p17(9-26 B consensus) | |
Epitope |
SGGELDRWEKIRLRPGGK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(17-34) p17(17-34) DNA(838..891) |
Gag Epitope Map |
---|---|---|
Author Location | p17(17-34 B consensus) | |
Epitope |
EKIRLRPGGKKKYKLKHI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(32-46) p17(32-46) DNA(883..927) |
Gag Epitope Map |
---|---|---|
Author Location | p17(32-46 B Consensus) | |
Epitope |
KHIVWASRELERFAV
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(37-51) p17(37-51) DNA(898..942) |
Gag Epitope Map |
---|---|---|
Author Location | p17(37-51 B consensus) | |
Epitope |
ASRELERFAVNPGLL
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*07:01, DRB1*13:02, DRB1*15:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(39-47) p17(39-47) DNA(904..930) |
Gag Epitope Map |
---|---|---|
Author Location | p17( B consensus) | |
Epitope |
RELERFAVN
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*13:02) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), immunodominance |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(41-51) p17(41-51) DNA(910..942) |
Gag Epitope Map |
---|---|---|
Author Location | p17(41-51 B consensus) | |
Epitope |
LERFAVNPGLL
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*13:02) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(42-51) p17(42-51) DNA(913..942) |
Gag Epitope Map |
---|---|---|
Author Location | p17( B consensus) | |
Epitope |
ERFAVNPGLL
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB3*02:02, DRB3*03:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), immunodominance |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(42-58) p17(42-58) DNA(913..963) |
Gag Epitope Map |
---|---|---|
Author Location | p17(42-58 B consensus) | |
Epitope |
ERFAVNPGLLETSEGCR
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:05, DRB1*11:01, DRB1*13:02) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | supervised treatment interruptions (STI), immunodominance |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(70-86) p17(70-86) DNA(997..1047) |
Gag Epitope Map |
---|---|---|
Author Location | p17(70-86 B Consensus) | |
Epitope |
TGSEELRSLYNTVATLY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(77-94) p17(77-94) DNA(1018..1071) |
Gag Epitope Map |
---|---|---|
Author Location | p17(77-94 B consensus) | |
Epitope |
SLYNTVATLYCVHQRIEV
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*07:01, DRB1*13:02, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(141-158) p24(9-26) DNA(1210..1263) |
Gag Epitope Map |
---|---|---|
Author Location | p24(9-26 B Consensus) | |
Epitope |
QMVHQAISPRTLNAWVKV
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(155-172) p24(23-40) DNA(1252..1305) |
Gag Epitope Map |
---|---|---|
Author Location | p24(23-40 B Consensus) | |
Epitope |
WVKVVEEKAFSPEVIPMF
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(163-179) p24(31-47) DNA(1276..1326) |
Gag Epitope Map |
---|---|---|
Author Location | p24(31-47 B Consensus) | |
Epitope |
AFSPEVIPMFSALSEGA
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(265-276) p24(133-144) DNA(1582..1617) |
Gag Epitope Map |
---|---|---|
Author Location | p24(133-144 B Consensus) | |
Epitope |
WIILGLNKIVRM
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*11:01, DRB1*13:02, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(265-282) p24(133-150) DNA(1582..1635) |
Gag Epitope Map |
---|---|---|
Author Location | p24(133-150 B Consensus) | |
Epitope |
WIILGLNKIVRMYSPTSI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*07:01, DRB1*11:01, DRB1*13:02, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(267-277) p24(135-145) DNA(1588..1620) |
Gag Epitope Map |
---|---|---|
Author Location | p24(135-145 B Consensus) | |
Epitope |
ILGLNKIVRMY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*04:01, DRB1*13:02, DRB1*15:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(273-290) p24(141-158) DNA(1606..1659) |
Gag Epitope Map |
---|---|---|
Author Location | p24(141-158 B Consensus) | |
Epitope |
IVRMYSPTSILDIRQGPK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(288-305) p24(156-173) DNA(1651..1704) |
Gag Epitope Map |
---|---|---|
Author Location | p24(156-173 B Consensus) | |
Epitope |
GPKEPFRDYVDRFYKTLR
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(296-313) p24(164-181) DNA(1675..1728) |
Gag Epitope Map |
---|---|---|
Author Location | p24(164-181 B Consensus) | |
Epitope |
YVDRFYKTLRAEQASQEV
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*07:01, DRB1*11:01, DRB1*13:02, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(299-310) p24(167-178) DNA(1684..1719) |
Gag Epitope Map |
---|---|---|
Author Location | p24(167-178 B Consensus) | |
Epitope |
RFYKTLRAEQAS
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*07:01, DRB1*11:01, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(300-311) p24(168-179) DNA(1687..1722) |
Gag Epitope Map |
---|---|---|
Author Location | p24(168-179 B Consensus) | |
Epitope |
FYKTLRAEQASQ
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*11:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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HXB2 Location | Gag(300-312) p24(168-180) DNA(1687..1725) |
Gag Epitope Map |
---|---|---|
Author Location | p24(168-180 B Consensus) | |
Epitope |
FYKTLRAEQASQE
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*11:01, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(301-309) p24(169-177) DNA(1690..1716) |
Gag Epitope Map |
---|---|---|
Author Location | p24(169-177 B Consensus) | |
Epitope |
YKTLRAEQA
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(317-334) p24(185-202) DNA(1738..1791) |
Gag Epitope Map |
---|---|---|
Author Location | p24(185-202 B Consensus) | |
Epitope |
MTETLLVQNANPDCKTIL
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(400-415) p2p7p1p6(37-52) DNA(1987..2034) |
Gag Epitope Map |
---|---|---|
Author Location | p15(37-52 B Consensus) | |
Epitope |
HIAKNCRAPRKKGCWK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(429-444) p2p7p1p6(66-81) DNA(2074..2121) |
Gag Epitope Map |
---|---|---|
Author Location | p15(66-81 B consensus) | |
Epitope |
RQANFLGKIWPSHKGR
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*04:05, DRB1*11:01, DRB1*13:02, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(435-452) p2p7p1p6(72-89) DNA(2092..2145) |
Gag Epitope Map |
---|---|---|
Author Location | p15(72-89 B Consensus) | |
Epitope |
GKIWPSHKGRPGNFLQSR
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(456-475) p2p7p1p6(93-112) DNA(2155..2214) |
Gag Epitope Map |
---|---|---|
Author Location | p15(93-112 B Consensus) | |
Epitope |
TAPPEESFRFGEETTTPSQK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(474-490) p2p7p1p6(111-127) DNA(2209..2259) |
Gag Epitope Map |
---|---|---|
Author Location | p15(111-127 B Consensus) | |
Epitope |
QKQEPIDKELYPLASLR
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(481-500) p2p7p1p6(118-137) DNA(2230..2289) |
Gag Epitope Map |
---|---|---|
Author Location | p15(118-137 B Consensus) | |
Epitope |
KELYPLASLRSLFGNDPSSQ
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(965-982) Integrase(250-267) DNA(4977..5030) |
Pol Epitope Map |
---|---|---|
Author Location | Integrase(250-267 B Consensus) | |
Epitope |
VIQDNSDIKVVPRRKAKI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Rev(14-30) DNA(6009..6045,8379..8392) |
Rev Epitope Map |
---|---|---|
Author Location | Rev(14-30 B Consensus) | |
Epitope |
KTVRLIKFLYQSNPPPS
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(81-97) DNA(9037..9087) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(81-97 B Consensus) | |
Epitope |
YKAAVDLSHFLKEKGGL
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(104-121) DNA(9106..9159) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(104-121 B Consensus) | |
Epitope |
QKRQDILDLWVYHTQGYF
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(112-127) DNA(9130..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(112-127 B Consensus) | |
Epitope |
LWVYHTQGYFPDWQNY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(162-178) DNA(9280..9330) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(162-178 B Consensus) | |
Epitope |
NSLLHPMSLHGMDDPEK
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(176-193) DNA(9322..9375) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(176-193 B consensus) | |
Epitope |
PEKEVLVWKFDSRLAFHH
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*04:01, DRB1*07:01, DRB1*11:01, DRB1*13:02, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(184-199) DNA(9346..9393) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(184-199 B consensus) | |
Epitope |
KFDSRLAFHHMARELH
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(DRB1*01:01, DRB1*07:01, DRB1*11:01, DRB1*15:01, DRB5*01:01) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ | |
Keywords | supervised treatment interruptions (STI), immunodominance |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(190-206) DNA(9364..9414) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(190-206 B Consensus) | |
Epitope |
AFHHMARELHPEYYKDC
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD4 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining | |
Keywords | supervised treatment interruptions (STI), rate of progression, immunodominance, acute/early infection |
Kaufmann2004 Daniel E. Kaufmann, Paul M. Bailey, John Sidney, Bradford Wagner, Philip J. Norris, Mary N. Johnston, Lisa A. Cosimi, Marylyn M. Addo, Mathias Lichterfeld, Marcus Altfeld, Nicole Frahm, Christian Brander, Alessandro Sette, Bruce D. Walker, and Eric S. Rosenberg. Comprehensive Analysis of Human Immunodeficiency Virus Type 1-Specific CD4 Responses Reveals Marked Immunodominance of gag and nef and the Presence of Broadly Recognized Peptides. J. Virol., 78(9):4463-4477, May 2004. PubMed ID: 15078927. Show all entries for this paper.
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