HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 8 matching records:

Displaying record number 52560

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Experimental methods  
Keywords optimal epitope

Notes

References

Llano2019 Anuska Llano, Samandhy CedeƱo, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.


Displaying record number 53271

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Nef( C consensus)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Epitope Name WI9
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Patient MHC/HLA A*2601, A*7401, B*0801, B*1510, Cw*0202, Cw*0801
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords assay or method development, characterizing CD8+ T cells

Notes

References

Kiepiela2004 Photini Kiepiela, Alasdair J. Leslie, Isobella Honeyborne, Danni Ramduth, Christina Thobakgale, Senica Chetty, Prinisha Rathnavalu, Corey Moore, Katja J. Pfafferott, Louise Hilton, Peter Zimbwa, Sarah Moore, Todd Allen, Christian Brander, Marylyn M. Addo, Marcus Altfeld, Ian James, Simon Mallal, Michael Bunce, Linda D. Barber, James Szinger, Cheryl Day, Paul Klenerman, James Mullins, Bette Korber, Hoosen M. Coovadia, Bruce D. Walker, and Philip J. R. Goulder. Dominant Influence of HLA-B in Mediating the Potential Co-Evolution of HIV and HLA. Nature, 432(7018):769-775, 9 Dec 2004. LA-UR 04-5920. PubMed ID: 15592417. Show all entries for this paper.


Displaying record number 53294

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location ( C consensus)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords characterizing CD8+ T cells

Notes

References

Kiepiela2004 Photini Kiepiela, Alasdair J. Leslie, Isobella Honeyborne, Danni Ramduth, Christina Thobakgale, Senica Chetty, Prinisha Rathnavalu, Corey Moore, Katja J. Pfafferott, Louise Hilton, Peter Zimbwa, Sarah Moore, Todd Allen, Christian Brander, Marylyn M. Addo, Marcus Altfeld, Ian James, Simon Mallal, Michael Bunce, Linda D. Barber, James Szinger, Cheryl Day, Paul Klenerman, James Mullins, Bette Korber, Hoosen M. Coovadia, Bruce D. Walker, and Philip J. R. Goulder. Dominant Influence of HLA-B in Mediating the Potential Co-Evolution of HIV and HLA. Nature, 432(7018):769-775, 9 Dec 2004. LA-UR 04-5920. PubMed ID: 15592417. Show all entries for this paper.


Displaying record number 53953

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location ( C consensus)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords epitope processing, rate of progression, optimal epitope

Notes

References

Kiepiela2007 Photini Kiepiela, Kholiswa Ngumbela, Christina Thobakgale, Dhanwanthie Ramduth, Isobella Honeyborne, Eshia Moodley, Shabashini Reddy, Chantal de Pierres, Zenele Mncube, Nompumelelo Mkhwanazi, Karen Bishop, Mary van der Stok, Kriebashnie Nair, Nasreen Khan, Hayley Crawford, Rebecca Payne, Alasdair Leslie, Julia Prado, Andrew Prendergast, John Frater, Noel McCarthy, Christian Brander, Gerald H. Learn, David Nickle, Christine Rousseau, Hoosen Coovadia, James I. Mullins, David Heckerman, Bruce D. Walker, and Philip Goulder. CD8+ T-Cell Responses to Different HIV Proteins Have Discordant Associations with Viral Load. Nat. Med., 13(1):46-53, Jan 2007. PubMed ID: 17173051. Show all entries for this paper.


Displaying record number 54186

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Experimental methods Other
Keywords epitope processing, HLA associated polymorphism

Notes

References

Boutwell2007 Christian L. Boutwell and M. Essex. Identification of HLA Class I-Associated Amino Acid Polymorphisms in the HIV-1C Proteome. AIDS Res. Hum. Retroviruses, 23(1):165-174, Jan 2007. PubMed ID: 17263647. Show all entries for this paper.


Displaying record number 56240

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location  
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Patient MHC/HLA A*2301, A*2902, B*1510, B*4501, Cw*0602, Cw*1601
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay
Keywords rate of progression, optimal epitope

Notes

References

Gray2009 Clive M. Gray, Mandla Mlotshwa, Catherine Riou, Tiyani Mathebula, Debra de Assis Rosa, Tumelo Mashishi, Cathal Seoighe, Nobubelo Ngandu, Francois van Loggerenberg, Lynn Morris, Koleka Mlisana, Carolyn Williamson, Salim Abdool Karim, and CAPRISA 002 Acute Infection Study Team. Human Immunodeficiency Virus-Specific gamma Interferon Enzyme-Linked Immunospot Assay Responses Targeting Specific Regions of the Proteome during Primary Subtype C Infection Are Poor Predictors of the Course of Viremia and Set Point. J. Virol., 83(1):470-478, Jan 2009. PubMed ID: 18945774. Show all entries for this paper.


Displaying record number 61038

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Patient MHC/HLA CAP045: A*2301, A*2902, B*1510, B*4501, Cw*1601, Cw*1602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords computational epitope prediction, escape, acute/early infection, mutation acquisition

Notes

References

Barton2016 John P. Barton, Nilu Goonetilleke, Thomas C. Butler, Bruce D. Walker, Andrew J. McMichael, and Arup K. Chakraborty. Relative Rate and Location of Intra-Host HIV Evolution to Evade Cellular Immunity Are Predictable. Nat. Commun., 7:11660, 23 May 2016. PubMed ID: 27212475. Show all entries for this paper.


Displaying record number 61045

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGHGVSI Epitope Alignment
WHLGHGVSI epitope logo
Subtype C
Species (MHC/HLA) human(B*1510)
Immunogen HIV-1 infection
Patient MHC/HLA CAP210: A*6802, B*1510, Cw*0304
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords computational epitope prediction, escape, acute/early infection, mutation acquisition

Notes

References

Barton2016 John P. Barton, Nilu Goonetilleke, Thomas C. Butler, Bruce D. Walker, Andrew J. McMichael, and Arup K. Chakraborty. Relative Rate and Location of Intra-Host HIV Evolution to Evade Cellular Immunity Are Predictable. Nat. Commun., 7:11660, 23 May 2016. PubMed ID: 27212475. Show all entries for this paper.


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