HIV molecular immunology database
Found 24 matching records:
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Species (MHC/HLA) | human(B*15:02) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*35) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | rate of progression |
Willberg2010 Christian B. Willberg, Keith E. Garrison, R. Brad Jones, Duncan J. Meiklejohn, Gerald Spotts, Teri J. Liegler, Mario A. Ostrowski, Annika C. Karlsson, Frederick M. Hecht, and Douglas F. Nixon. Rapid Progressing Allele HLA-B35 Px Restricted Anti-HIV-1 CD8+ T Cells Recognize Vestigial CTL Epitopes. PLoS One, 5(4):e10249, 2010. PubMed ID: 20422053. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | (B*35) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | Flow cytometric T-cell cytokine assay, Intracellular cytokine staining, Proliferation | |
Keywords | acute/early infection |
Heath2011 Sonya L. Heath, Steffanie Sabbaj, Anju Bansal, J Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Proliferative Capacity Is Compromised in Primary HIV-1 Infection. J. Acquir. Immune Defic. Syndr., 56(3):213-221, Mar 2011. PubMed ID: 21079516. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | Pol-TY9; RT-TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*35) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | HAART, ART |
Sabbaj2003 Steffanie Sabbaj, Anju Bansal, G. Douglas Ritter, Christopher Perkins, Bradley H. Edwards, Ethan Gough, Jianming Tang, James J. Szinger, Bette Korber, Craig M. Wilson, Richard A. Kaslow, Mark J. Mulligan, and Paul A. Goepfert. Cross-Reactive CD8+ T Cell Epitopes Identified in US Adolescent Minorities. J. Acquir. Immune Defic. Syndr., 33(4):426-438, 1 Aug 2003. PubMed ID: 12869831. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A11, A3, B35, B51 | |
Experimental methods | ||
Keywords | mother-to-infant transmission |
Sabbaj2002a Steffanie Sabbaj, Bradley H. Edwards, Mrinal K. Ghosh, Katherine Semrau, Sanford Cheelo, Donald M. Thea, Louise Kuhn, G. Douglas Ritter, Mark J. Mulligan, Paul A. Goepfert, and Grace M. Aldrovandi. Human Immunodeficiency Virus-Specific CD8(+) T Cells in Human Breast Milk. J. Virol., 76(15):7365-7373, Aug 2002. PubMed ID: 12097549. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(107-115) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Country | Canada | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Chromium-release assay | |
Keywords | HAART, ART, immunotherapy, variant cross-reactivity |
Mason2004 Rosemarie D. Mason, M. Ian Bowmer, Constance M. Howley, Maureen Gallant, Jennifer C. E. Myers, and Michael D. Grant. Antiretroviral Drug Resistance Mutations Sustain or Enhance CTL Recognition of Common HIV-1 Pol Epitopes. J. Immunol., 172(11):7212-7219, 1 Jun 2004. PubMed ID: 15153547. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | B35-TY9(RT) | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | rate of progression, immunodominance, early-expressed proteins |
Altfeld2006 Marcus Altfeld, Elizabeth T. Kalife, Ying Qi, Hendrik Streeck, Mathias Lichterfeld, Mary N. Johnston, Nicole Burgett, Martha E. Swartz, Amy Yang, Galit Alter, Xu G. Yu, Angela Meier, Juergen K. Rockstroh, Todd M. Allen, Heiko Jessen, Eric S. Rosenberg, Mary Carrington, and Bruce D. Walker. HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8+ T Cell Response against HIV-1. PLoS Med., 3(10):e403, Oct 2006. PubMed ID: 17076553. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9(RT) | |
Subtype | B | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Country | China | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | chronic infection |
Zhai2008 Song Zhai, Yan Zhuang, Yang Song, Shu Li, Dedong Huang, Wenzhen Kang, Xinhong Li, Qi Liao, Yanhou Liu, Zhongfang Zhao, Yichen Lu, and Yongtao Sun. HIV-1-Specific Cytotoxic T Lymphocyte (CTL) Responses Against Immunodominant Optimal Epitopes Slow the Progression of AIDS in China. Curr. HIV Res., 6(4):335-350, Jun 2008. PubMed ID: 18691032. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(262-270 IIIB) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | review, responses in children, mother-to-infant transmission |
Menendez-Arias1998 L. Menendez-Arias, A. Mas, and E. Domingo. Cytotoxic T-Lymphocyte Responses to HIV-1 Reverse Transcriptase. Viral Immunol., 11:167-181, 1998. PubMed ID: 10189185. Show all entries for this paper.
Walkerpercom1996 C. Wilson, B. Wilkes, D. Ruhl, and B. Walker. Personal communication, 1996. Defined in the context of the Pediatric AIDS Foundation ARIEL Project, a mother-infant HIV transmission study. Personal communication. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270 IIIB) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Show epitope variants | ||
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | responses in children, mother-to-infant transmission, escape |
Wilson1999a C. C. Wilson, R. C. Brown, B. T. Korber, B. M. Wilkes, D. J. Ruhl, D. Sakamoto, K. Kunstman, K. Luzuriaga, I. C. Hanson, S. M. Widmayer, A. Wiznia, S. Clapp, A. J. Ammann, R. A. Koup, S. M. Wolinsky, and B. D. Walker. Frequent Detection of Escape from Cytotoxic T-Lymphocyte Recognition in Perinatal Human Immunodeficiency Virus (HIV) Type 1 Transmission: The Ariel Project for the Prevention of Transmission of HIV from Mother to Infant. J. Virol., 73:3975-3985, 1999. PubMed ID: 10196293. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords |
Ferrari2000 G. Ferrari, D. D. Kostyu, J. Cox, D. V. Dawson, J. Flores, K. J. Weinhold, and S. Osmanov. Identification of highly conserved and broadly cross-reactive HIV type 1 cytotoxic T lymphocyte epitopes as candidate immunogens for inclusion in Mycobacterium bovis BCG-vectored HIV vaccines. AIDS Res. Hum. Retroviruses, 16(14):1433-43, 20 Sep 2000. PubMed ID: 11018863. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(262-270 SF2) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HAART, ART, acute/early infection |
Altfeld2001b M. Altfeld, E. S. Rosenberg, R. Shankarappa, J. S. Mukherjee, F. M. Hecht, R. L. Eldridge, M. M. Addo, S. H. Poon, M. N. Phillips, G. K. Robbins, P. E. Sax, S. Boswell, J. O. Kahn, C. Brander, P. J. Goulder, J. A. Levy, J. I. Mullins, and B. D. Walker. Cellular immune responses and viral diversity in individuals treated during acute and early HIV-1 infection. J. Exp. Med., 193(2):169-80, 15 Jan 2001. URL: http://www.jem.org/cgi/content/full/193/2/169. PubMed ID: 11148221. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*02:01, A*24:02, B*35:01, B*35:03, C*03:03, C*04:01 | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | acute/early infection |
Herbeck2011 Joshua T. Herbeck, Morgane Rolland, Yi Liu, Sherry McLaughlin, John McNevin, Hong Zhao, Kim Wong, Julia N. Stoddard, Dana Raugi, Stephanie Sorensen, Indira Genowati, Brian Birditt, Angela McKay, Kurt Diem, Brandon S. Maust, Wenjie Deng, Ann C. Collier, Joanne D. Stekler, M. Juliana McElrath, and James I. Mullins. Demographic Processes Affect HIV-1 Evolution in Primary Infection before the Onset of Selective Processes. J. Virol., 85(15):7523-7534, Aug 2011. PubMed ID: 21593162. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(107-115) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ, CTL suppression of replication, Flow cytometric T-cell cytokine assay, Intracellular cytokine staining | |
Keywords | immunodominance, elite controllers |
Akinsiku2011 Olusimidele T. Akinsiku, Anju Bansal, Steffanie Sabbaj, Sonya L. Heath, and Paul A. Goepfert. Interleukin-2 Production by Polyfunctional HIV-1-Specific CD8 T Cells Is Associated with Enhanced Viral Suppression. J. Acquir. Immune Defic. Syndr., 58(2):132-140, 1 Oct 2011. PubMed ID: 21637109. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection, vaccine | |
Country | Japan | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Zou2019 Chengcheng Zou, Hayato Murakoshi, Nozomi Kuse, Tomohiro Akahoshi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, Tomáš Hanke, and Masafumi Takiguchi. Effective Suppression of HIV-1 Replication by Cytotoxic T Lymphocytes Specific for Pol Epitopes in Conserved Mosaic Vaccine Immunogens. J. Virol., 93(7), 1 Apr 2019. PubMed ID: 30674626. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | CD8 T-cell Elispot - IFNγ, CTL suppression of replication, Intracellular cytokine staining, Tetramer binding | |
Keywords | escape, HLA associated polymorphism |
Murakoshi2018a Hayato Murakoshi, Madoka Koyanagi, Tomohiro Akahoshi, Takayuki Chikata, Nozomi Kuse, Hiroyuki Gatanaga, Sarah L. Rowland-Jones, Shinichi Oka, and Masafumi Takiguchi. Impact of a Single HLA-A*24:02-Associated Escape Mutation on the Detrimental Effect of HLA-B*35:01 in HIV-1 Control. EBioMedicine, 36:103-112, Oct 2018. PubMed ID: 30249546. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | RT TY9 | |
Subtype | B, C | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection | |
Country | Barbados, Botswana, Haiti, Japan, Mexico, South Africa, United Kingdom, United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Matthews2012 Philippa C. Matthews, Madoka Koyanagi, Henrik N. Kløverpris, Mikkel Harndahl, Anette Stryhn, Tomohiro Akahoshi, Hiroyuki Gatanaga, Shinichi Oka, Claudia Juarez Molina, Humberto Valenzuela Ponce, Santiago Avila Rios, David Cole, Jonathan Carlson, Rebecca P. Payne, Anthony Ogwu, Alfred Bere, Thumbi Ndung'u, Kamini Gounder, Fabian Chen, Lynn Riddell, Graz Luzzi, Roger Shapiro, Christian Brander, Bruce Walker, Andrew K. Sewell, Gustavo Reyes Teran, David Heckerman, Eric Hunter, Søren Buus, Masafumi Takiguchi, and Philip J. R. Goulder. Differential Clade-Specific HLA-B*3501 Association with HIV-1 Disease Outcome Is Linked to Immunogenicity of a Single Gag Epitope. J. Virol., 86(23):12643-12654, Dec 2012. PubMed ID: 22973023. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(262-270 IIIB) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | ||
Experimental methods | ||
Keywords | optimal epitope, A-list |
Llano2019 Anuska Llano, Samandhy Cedeño, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | RT(107-115) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Chromium-release assay, Cytokine production, HLA binding, Other | |
Keywords | vaccine-induced immune responses, HLA cross-presentation, HLA associated polymorphism |
Reche2006 Pedro A. Reche, Derin B. Keskin, Rebecca E. Hussey, Petronela Ancuta, Dana Gabuzda, and Ellis L. Reinherz. Elicitation from Virus-Naive Individuals of Cytotoxic T Lymphocytes Directed against Conserved HIV-1 Epitopes. Med. Immunol., 5:1, 2006. PubMed ID: 16674822. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06 | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining | |
Keywords | dynamics, acute/early infection |
Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Species (MHC/HLA) | human(B*35:02, B*35:03, B*53:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Rev(107-115) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human(B*57:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01 | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | acute/early infection |
Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(262-270) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Species (MHC/HLA) | human(C*12) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(262-270) RT(107-115) DNA(2868..2894) |
Pol Epitope Map |
---|---|---|
Author Location | Gag( 90TH_BK132, US1_GS004/7, J3222, JR-CSF, NL4-3, LAI) | |
Epitope |
TVLDVGDAY
|
Epitope Alignment
|
Epitope Name | TY9 | |
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | in vitro stimulation or selection, HIV-1 infection, peptide-HLA interaction | |
Country | Canada, United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining | |
Keywords | assay or method development, memory cells |
Jones2016 R. Brad Jones, Stefanie Mueller, Rachel O'Connor, Katherine Rimpel, Derek D. Sloan, Dan Karel, Hing C. Wong, Emily K. Jeng, Allison S. Thomas, James B. Whitney, So-Yon Lim, Colin Kovacs, Erika Benko, Sara Karandish, Szu-Han Huang, Maria J. Buzon, Mathias Lichterfeld, Alivelu Irrinki, Jeffrey P. Murry, Angela Tsai, Helen Yu, Romas Geleziunas, Alicja Trocha, Mario A. Ostrowski, Darrell J. Irvine, and Bruce D. Walker. A Subset of Latency-Reversing Agents Expose HIV-Infected Resting CD4+ T-Cells to Recognition by Cytotoxic T-Lymphocytes. PLoS Pathog., 12(4):e1005545, Apr 2016. PubMed ID: 27082643. Show all entries for this paper.