HIV molecular immunology database
Found 3 matching records:
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HXB2 Location | Gag(471-479) p2p7p1p6(108-116) DNA(2200..2226) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
TPSQKQEPI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(471-479) p2p7p1p6(108-116) DNA(2200..2226) |
Gag Epitope Map |
---|---|---|
Author Location | p15 | |
Epitope |
TPSQKQEPI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B53) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(471-479) p2p7p1p6(108-116) DNA(2200..2226) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(471-479) | |
Epitope |
TPSQKQEPI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30:01:01, A*33:03:01, B*42:01, B*53:01:01 | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | acute/early infection, viral fitness and reversion, elite controllers |
OConnell2009 Karen A. O'Connell, Jie Xu, Anna P. Durbin, Linda G. Apuzzo, Hejab Imteyaz, Thomas M. Williams, Stuart C. Ray, Joseph B. Margolick, Robert F. Siliciano, and Joel N. Blankson. HIV-1 Evolution Following Transmission to an HLA-B*5801-Positive Patient. J. Infect. Dis., 200(12):1820-1824, 15 Dec 2009. PubMed ID: 19909081. Show all entries for this paper.