HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 3 matching records:

Displaying record number 53693

Download this epitope record as JSON.

HXB2 Location Gag(471-479)
p2p7p1p6(108-116)
DNA(2200..2226)
Gag Epitope Map
Author Location p2p7p1p6
Epitope TPSQKQEPI Epitope Alignment
TPSQKQEPI epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53700

Download this epitope record as JSON.

HXB2 Location Gag(471-479)
p2p7p1p6(108-116)
DNA(2200..2226)
Gag Epitope Map
Author Location p15
Epitope TPSQKQEPI Epitope Alignment
TPSQKQEPI epitope logo
Subtype D
Species (MHC/HLA) human(B53)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 57237

Download this epitope record as JSON.

HXB2 Location Gag(471-479)
p2p7p1p6(108-116)
DNA(2200..2226)
Gag Epitope Map
Author Location Gag(471-479)
Epitope TPSQKQEPI Epitope Alignment
TPSQKQEPI epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA A*30:01:01, A*33:03:01, B*42:01, B*53:01:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, viral fitness and reversion, elite controllers

Notes

References

OConnell2009 Karen A. O'Connell, Jie Xu, Anna P. Durbin, Linda G. Apuzzo, Hejab Imteyaz, Thomas M. Williams, Stuart C. Ray, Joseph B. Margolick, Robert F. Siliciano, and Joel N. Blankson. HIV-1 Evolution Following Transmission to an HLA-B*5801-Positive Patient. J. Infect. Dis., 200(12):1820-1824, 15 Dec 2009. PubMed ID: 19909081. Show all entries for this paper.


Questions or comments? Contact us at immuno@lanl.gov
 
Managed by Triad National Security, LLC for the U.S. Department of Energy’s National Nuclear Security Administration
Copyright © 2022 Triad National Security, LLC | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health