Found 14 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11) | |
Immunogen | HIV-1 infection | |
Country | Australia, Canada, Germany, United States | |
Experimental methods | ||
Keywords | escape, HLA associated polymorphism |
Brumme2008 Zabrina L. Brumme, Chanson J. Brumme, Jonathan Carlson, Hendrik Streeck, Mina John, Quentin Eichbaum, Brian L Block, Brett Baker, Carl Kadie, Martin Markowitz, Heiko Jessen, Anthony D. Kelleher, Eric Rosenberg, John Kaldor, Yuko Yuki, Mary Carrington, Todd M. Allen, Simon Mallal, Marcus Altfeld, David Heckerman, and Bruce D. Walker. Marked Epitope- and Allele-Specific Differences in Rates of Mutation in Human Immunodeficiency Type 1 (HIV-1) Gag, Pol, and Nef Cytotoxic T-Lymphocyte Epitopes in Acute/Early HIV-1 Infection. J. Virol., 82(18):9216-9227, Sep 2008. PubMed ID: 18614631. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9 | |
Subtype | B | |
Species (MHC/HLA) | (A*11) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding, Other | |
Keywords | epitope processing |
Tenzer2009 Stefan Tenzer, Edmund Wee, Anne Burgevin, Guillaume Stewart-Jones, Lone Friis, Kasper Lamberth, Chih-hao Chang, Mikkel Harndahl, Mirjana Weimershaus, Jan Gerstoft, Nadja Akkad, Paul Klenerman, Lars Fugger, E. Yvonne Jones, Andrew J. McMichael, Søren Buus, Hansjörg Schild, Peter van Endert, and Astrid K. N. Iversen. Antigen Processing Influences HIV-Specific Cytotoxic T Lymphocyte Immunodominance. Nat. Immunol., 10(6):636-646, Jun 2009. PubMed ID: 19412183. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | A11-TI9 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11) | |
Immunogen | HIV-1 infection | |
Country | Canada | |
Experimental methods | Chromium-release assay, Other | |
Keywords | epitope processing, escape |
Zhang2012 Shao Chong Zhang, Eric Martin, Mariko Shimada, Sasha Blue Godfrey, Jennifer Fricke, Shirley Locastro, Nicole Y. Lai, Paul Liebesny, Jonathan M. Carlson, Chanson J. Brumme, Oluwatobi Awele Ogbechie, Huabiao Chen, Bruce D. Walker, Zabrina L. Brumme, Daniel G. Kavanagh, and Sylvie Le Gall. Aminopeptidase Substrate Preference Affects HIV Epitope Presentation and Predicts Immune Escape Patterns in HIV-Infected Individuals. J. Immunol., 188(12):5924-5934, 15 Jun 2012. PubMed ID: 22586036. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92 SF2) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | 6009: A11, A3, B35, B39, Cw4, Cw7 | |
Experimental methods | ||
Keywords | HAART, ART, acute/early infection |
Altfeld2001b M. Altfeld, E. S. Rosenberg, R. Shankarappa, J. S. Mukherjee, F. M. Hecht, R. L. Eldridge, M. M. Addo, S. H. Poon, M. N. Phillips, G. K. Robbins, P. E. Sax, S. Boswell, J. O. Kahn, C. Brander, P. J. Goulder, J. A. Levy, J. I. Mullins, and B. D. Walker. Cellular immune responses and viral diversity in individuals treated during acute and early HIV-1 infection. J. Exp. Med., 193(2):169-80, 15 Jan 2001. URL: http://www.jem.org/cgi/content/full/193/2/169. PubMed ID: 11148221. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative, HIV-1 infection | |
Country | Kenya | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Other | |
Keywords | HIV exposed persistently seronegative (HEPS) |
Kaul2001a R. Kaul, T. Dong, F. A. Plummer, J. Kimani, T. Rostron, P. Kiama, E. Njagi, E. Irungu, B. Farah, J. Oyugi, R. Chakraborty, K. S. MacDonald, J. J. Bwayo, A. McMichael, and S. L. Rowland-Jones. CD8(+) lymphocytes respond to different HIV epitopes in seronegative and infected subjects. J. Clin. Invest., 107(10):1303-10, May 2001. URL: http://www.jci.org/cgi/content/full/107/10/1303. PubMed ID: 11375420. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9-A11 | |
Subtype | B, F | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Country | Argentina | |
Experimental methods | ||
Keywords | dynamics, HLA associated polymorphism |
Dilernia2008 Dario Alberto Dilernia, Leandro Jones, Sabrina Rodriguez, Gabriela Turk, Andrea E Rubio, Sandra Pampuro, Manuel Gomez-Carrillo, Christian Bautista, Gabriel Deluchi, Jorge Benetucci, María Beatriz Lasala, Leonardo Lourtau, Marcelo Horacio Losso, Héctor Perez, Pedro Cahn, and Horacio Salomón. HLA-Driven Convergence of HIV-1 Viral Subtypes B and F Toward the Adaptation to Immune Responses in Human Populations. PLoS ONE, 3(10):e3429, 2008. PubMed ID: 18941505. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9(p17) | |
Subtype | B | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Country | China | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | chronic infection |
Zhai2008 Song Zhai, Yan Zhuang, Yang Song, Shu Li, Dedong Huang, Wenzhen Kang, Xinhong Li, Qi Liao, Yanhou Liu, Zhongfang Zhao, Yichen Lu, and Yongtao Sun. HIV-1-Specific Cytotoxic T Lymphocyte (CTL) Responses Against Immunodominant Optimal Epitopes Slow the Progression of AIDS in China. Curr. HIV Res., 6(4):335-350, Jun 2008. PubMed ID: 18691032. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | responses in children, mother-to-infant transmission |
Brander1995a Christian Brander and Bruce Walker. The HLA-Class I Restricted CTL Response in HIV-1 Infection: Identification of Optimal Epitopes. In The HLA-Class I Restricted CTL Response in HIV-1 Infection: Identification of Optimal Epitopes. pages IV--1--IV--9. Los Alamos National Laboratory, Theoretical Biology and Biophysics, Los Alamos, New Mexico, 1995. URL: http://hiv-web.lanl.gov/immunology. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords |
Birk1998 M. Birk, A. Vahlne, A. Sonnerborg, and M. Sallberg. Nonsynonymous Mutations within the Human Immunodeficiency Virus Type 1 p17 Gene Are Clustered to Sequences Binding to the Host Human Leukocyte Antigen Class I Molecules. AIDS Res. Hum. Retroviruses, 14:241-248, 1998. PubMed ID: 9491914. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords |
Ferrari2000 G. Ferrari, D. D. Kostyu, J. Cox, D. V. Dawson, J. Flores, K. J. Weinhold, and S. Osmanov. Identification of highly conserved and broadly cross-reactive HIV type 1 cytotoxic T lymphocyte epitopes as candidate immunogens for inclusion in Mycobacterium bovis BCG-vectored HIV vaccines. AIDS Res. Hum. Retroviruses, 16(14):1433-43, 20 Sep 2000. PubMed ID: 11018863. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9 | |
Species (MHC/HLA) | human(A*32) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9 | |
Species (MHC/HLA) | human(B*13) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(84-92) | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | TI9 | |
Species (MHC/HLA) | human(C*12) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(84-92) p17(84-92) DNA(1039..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
TLYCVHQRI
|
Epitope Alignment
|
Epitope Name | A11-TI9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | immunodominance, acute/early infection, chronic infection |
Streeck2009a Hendrik Streeck, Jonathan S. Jolin, Ying Qi, Bader Yassine-Diab, Randall C. Johnson, Douglas S. Kwon, Marylyn M. Addo, Chanson Brumme, Jean-Pierre Routy, Susan Little, Heiko K. Jessen, Anthony D. Kelleher, Frederick M. Hecht, Rafick-Pierre Sekaly, Eric S. Rosenberg, Bruce D. Walker, Mary Carrington, and Marcus Altfeld. Human Immunodeficiency Virus Type 1-Specific CD8+ T-Cell Responses during Primary Infection Are Major Determinants of the Viral Set Point and Loss of CD4+ T Cells. J. Virol., 83(15):7641-7648, Aug 2009. PubMed ID: 19458000. Show all entries for this paper.
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