Found 10 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(162-169) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | KI8 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, optimal epitope, chronic infection |
Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(30-37) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | K18 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | Gag-KI8; p24-KI8 | |
Subtype | B | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | HAART, ART |
Sabbaj2003 Steffanie Sabbaj, Anju Bansal, G. Douglas Ritter, Christopher Perkins, Bradley H. Edwards, Ethan Gough, Jianming Tang, James J. Szinger, Bette Korber, Craig M. Wilson, Richard A. Kaslow, Mark J. Mulligan, and Paul A. Goepfert. Cross-Reactive CD8+ T Cell Epitopes Identified in US Adolescent Minorities. J. Acquir. Immune Defic. Syndr., 33(4):426-438, 1 Aug 2003. PubMed ID: 12869831. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(30-37) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | KI-8 | |
Subtype | B, C | |
Species (MHC/HLA) | human(B*57, B*57:01, B*57:03) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords |
Tenzer2014 Stefan Tenzer, Hayley Crawford, Phillip Pymm, Robert Gifford, Vattipally B. Sreenu, Mirjana Weimershaus, Tulio de Oliveira, Anne Burgevin, Jan Gerstoft, Nadja Akkad, Daniel Lunn, Lars Fugger, John Bell, Hansjörg Schild, Peter van Endert, and Astrid K. N. Iversen. HIV-1 Adaptation to Antigen Processing Results in Population-Level Immune Evasion and Affects Subtype Diversification. Cell Rep., 7(2):448-463, 24 Apr 2014. PubMed ID: 24726370. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(30-37) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | KI8 | |
Species (MHC/HLA) | human(B57) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | 026-BMC: A3, B42, B*57:03, C*17, Cw7 | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children |
Goulder2000a P. J. Goulder, Y. Tang, S. I. Pelton, and B. D. Walker. HLA-B57-Restricted Cytotoxic T-Lymphocyte Activity in a Single Infected Subject toward Two Optimal Epitopes, One of Which Is Entirely Contained Within the Other. J. Virol., 74:5291-5299, 2000. PubMed ID: 10799606. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(162-169) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Subtype | A1 | |
Species (MHC/HLA) | human(B*57:03) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | ML1111: A*30:01, A*36:01, B*42:01, B*57:03, C*17:01, C*18:01 | |
Country | Kenya | |
Experimental methods | Other | |
Keywords | assay or method development |
Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(162-170 LAI) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(B*57:03) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | optimal epitope, A-list |
Llano2019 Anuska Llano, Samandhy Cedeño, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | KAF-8 | |
Species (MHC/HLA) | human(B*57:03) | |
Immunogen | peptide-HLA interaction | |
Country | Kenya | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining, Other | |
Keywords | structure |
Stewart-Jones2005 Guillaume B. E. Stewart-Jones, Geraldine Gillespie, Ian M. Overton, Rupert Kaul, Philippe Roche, Andrew J. McMichael, Sarah Rowland-Jones, and E. Yvonne Jones. Structures of Three HIV-1 HLA-B*5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Nonprogression. J. Immunol., 175(4):2459-2468, 15 Aug 2005. PubMed ID: 16081817. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | B57-KI8 | |
Species (MHC/HLA) | human | |
Immunogen | in vitro stimulation or selection | |
Experimental methods | In vitro proteasome digestion | |
Keywords | epitope processing |
Boucau2019 Julie Boucau, Julien Madouasse, Georgio Kourjian, Christopher S. Carlin, Daniel Wambua, Matthew J. Berberich, and Sylvie Le Gall. The Activation State of CD4 T Cells Alters Cellular Peptidase Activities, HIV Antigen Processing, and MHC Class I Presentation in a Sequence-Dependent Manner. J. Immunol., 202(10):2856-2872, 15 May 2019. PubMed ID: 30936293. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(162-169) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human | |
Immunogen | engineered | |
Experimental methods | Other, Relative replication capacity assay | |
Keywords | assay or method development, protective allele |
Du2017 Yushen Du, Tian-Hao Zhang, Lei Dai, Xiaojuan Zheng, Aleksandr M. Gorin, John Oishi, Ting-Ting Wu, Janice M. Yoshizawa, Xinmin Li, Otto O. Yang, Otoniel Martinez-Maza, Roger Detels, and Ren Sun. Effects of Mutations on Replicative Fitness and Major Histocompatibility Complex Class I Binding Affinity Are Among the Determinants Underlying Cytotoxic-T-Lymphocyte Escape of HIV-1 Gag Epitopes. mBio, 8(6), 28 Nov 2017. PubMed ID: 29184023. Show all entries for this paper.
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