HIV molecular immunology database
Found 7 matching records:
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(119-127) | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, CRF02_AG | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Country | Cote D'Ivoire | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Inwoley2005 André Inwoley, Patricia Recordon-Pinson, Marion Dupuis, Jessintha Gaston, Mathieu Genête, Albert Minga, Franck Letourneur, François Rouet, Jeannine Choppin, Hervé Fleury, Jean-Gérard Guillet, Muriel Andrieu, and ANRS 1220 PRIMO-CI Study Group. Cross-Clade Conservation of HIV Type 1 Nef Immunodominant Regions Recognized by CD8+ T Cells of HIV Type 1 CRF02\_AG-Infected Ivorian (West Africa). AIDS Res. Hum. Retroviruses, 21(7):620-628, Jul 2005. PubMed ID: 16060833. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | ||
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Subtype | C | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Chromium-release assay | |
Keywords | rate of progression, optimal epitope |
Gray2009 Clive M. Gray, Mandla Mlotshwa, Catherine Riou, Tiyani Mathebula, Debra de Assis Rosa, Tumelo Mashishi, Cathal Seoighe, Nobubelo Ngandu, Francois van Loggerenberg, Lynn Morris, Koleka Mlisana, Carolyn Williamson, Salim Abdool Karim, and CAPRISA 002 Acute Infection Study Team. Human Immunodeficiency Virus-Specific gamma Interferon Enzyme-Linked Immunospot Assay Responses Targeting Specific Regions of the Proteome during Primary Subtype C Infection Are Poor Predictors of the Course of Viremia and Set Point. J. Virol., 83(1):470-478, Jan 2009. PubMed ID: 18945774. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(B*58) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, immunodominance, novel epitope |
Migueles2015 Stephen A. Migueles, Daniel Mendoza, Matthew G. Zimmerman, Kelly M. Martins, Sushila A. Toulmin, Elizabeth P. Kelly, Bennett A. Peterson, Sarah A. Johnson, Eric Galson, Kate O. Poropatich, Andy Patamawenu, Hiromi Imamichi, Alexander Ober, Catherine A. Rehm, Sara Jones, Claire W. Hallahan, Dean A. Follmann, and Mark Connors. CD8+ T-Cell Cytotoxic Capacity Associated with Human Immunodeficiency Virus-1 Control Can Be Mediated through Various Epitopes and Human Leukocyte Antigen Types. EBioMedicine, 2(1):46-58, Jan 2015. PubMed ID: 26137533. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(119-127) | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Epitope Name | GY9 | |
Species (MHC/HLA) | human(B*58) | |
Immunogen | ||
Experimental methods | ||
Keywords | optimal epitope |
Llano2019 Anuska Llano, Samandhy Cedeño, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Subtype | B | |
Species (MHC/HLA) | human(Cw*02) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay | |
Keywords | rate of progression, immunodominance, novel epitope |
Migueles2015 Stephen A. Migueles, Daniel Mendoza, Matthew G. Zimmerman, Kelly M. Martins, Sushila A. Toulmin, Elizabeth P. Kelly, Bennett A. Peterson, Sarah A. Johnson, Eric Galson, Kate O. Poropatich, Andy Patamawenu, Hiromi Imamichi, Alexander Ober, Catherine A. Rehm, Sara Jones, Claire W. Hallahan, Dean A. Follmann, and Mark Connors. CD8+ T-Cell Cytotoxic Capacity Associated with Human Immunodeficiency Virus-1 Control Can Be Mediated through Various Epitopes and Human Leukocyte Antigen Types. EBioMedicine, 2(1):46-58, Jan 2015. PubMed ID: 26137533. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(119-127) | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Epitope Name | GY9 | |
Species (MHC/HLA) | human(Cw*02) | |
Immunogen | ||
Experimental methods | ||
Keywords | optimal epitope |
Llano2019 Anuska Llano, Samandhy Cedeño, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.
HXB2 Location | Nef(119-127) DNA(9151..9177) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
GYFPDWQNY
|
Epitope Alignment
|
Subtype | C, D | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection | |
Country | Sweden | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction, vaccine antigen design |
Perez2008 Carina L. Pérez, Mette V. Larsen, Rasmus Gustafsson, Melissa M. Norström, Ann Atlas, Douglas F. Nixon, Morten Nielsen, Ole Lund, and Annika C. Karlsson. Broadly Immunogenic HLA Class I Supertype-Restricted Elite CTL Epitopes Recognized in a Diverse Population Infected with Different HIV-1 Subtypes. J. Immunol., 180(7):5092-5100, 1 Apr 2008. PubMed ID: 18354235. Show all entries for this paper.