HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 11 matching records:

Displaying record number 61198

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Epitope Name EV10
Subtype B
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Country Japan
Experimental methods Other
Keywords HLA associated polymorphism

Notes

References

Kamori2017 Doreen Kamori, Zafrul Hasan, Jun Ohashi, Ai Kawana-Tachikawa, Hiroyuki Gatanaga, Shinichi Oka, and Takamasa Ueno. Identification of Two Unique Naturally Occurring Vpr Sequence Polymorphisms Associated with Clinical Parameters in HIV-1 Chronic Infection. J. Med. Virol., 89(1):123-129, Jan 2017. PubMed ID: 27328918. Show all entries for this paper.


Displaying record number 54120

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Species (MHC/HLA) human(A*6802)
Immunogen  
Experimental methods  
Keywords optimal epitope

Notes

References

Llano2019 Anuska Llano, Samandhy Cedeño, Sandra Silva Arrieta, and Christian Brander. The 2019 Optimal HIV CTL Epitopes Update: Growing Diversity in Epitope Length and HLA restriction. 2019. Show all entries for this paper.


Displaying record number 54187

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Subtype C
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Experimental methods Other
Keywords HLA associated polymorphism

Notes

References

Boutwell2007 Christian L. Boutwell and M. Essex. Identification of HLA Class I-Associated Amino Acid Polymorphisms in the HIV-1C Proteome. AIDS Res. Hum. Retroviruses, 23(1):165-174, Jan 2007. PubMed ID: 17263647. Show all entries for this paper.


Displaying record number 56256

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location  
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Subtype C
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Patient MHC/HLA A*6802, B*1510, Cw*0304
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay
Keywords rate of progression

Notes

References

Gray2009 Clive M. Gray, Mandla Mlotshwa, Catherine Riou, Tiyani Mathebula, Debra de Assis Rosa, Tumelo Mashishi, Cathal Seoighe, Nobubelo Ngandu, Francois van Loggerenberg, Lynn Morris, Koleka Mlisana, Carolyn Williamson, Salim Abdool Karim, and CAPRISA 002 Acute Infection Study Team. Human Immunodeficiency Virus-Specific gamma Interferon Enzyme-Linked Immunospot Assay Responses Targeting Specific Regions of the Proteome during Primary Subtype C Infection Are Poor Predictors of the Course of Viremia and Set Point. J. Virol., 83(1):470-478, Jan 2009. PubMed ID: 18945774. Show all entries for this paper.


Displaying record number 59035

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Show epitope variants
Epitope Name Vpr-EV10
Subtype C
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Country United Kingdom
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords optimal epitope, novel epitope

Notes

References

Kloverpris2013c Henrik N. Kløverpris, Anette Stryhn, Mikkel Harndahl, Jonathan M. Carlson, Alasdair J. Leslie, Fabian Chen, Lynn Riddell, Joseph Mulenga, Bruce D. Walker, Thumbi Ndung'u, Søren Buus, and Philip Goulder. HLA-A*68:02-Restricted Gag-Specific Cytotoxic T Lymphocyte Responses Can Drive Selection Pressure on HIV but Are Subdominant and Ineffective. AIDS, 27(11):1717-1723, 17 Jul 2013. PubMed ID: 23525031. Show all entries for this paper.


Displaying record number 59648

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Epitope Name EV10
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords rate of progression, optimal epitope

Notes

References

Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.


Displaying record number 53954

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location ( C consensus)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Subtype C
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, optimal epitope

Notes

References

Kiepiela2007 Photini Kiepiela, Kholiswa Ngumbela, Christina Thobakgale, Dhanwanthie Ramduth, Isobella Honeyborne, Eshia Moodley, Shabashini Reddy, Chantal de Pierres, Zenele Mncube, Nompumelelo Mkhwanazi, Karen Bishop, Mary van der Stok, Kriebashnie Nair, Nasreen Khan, Hayley Crawford, Rebecca Payne, Alasdair Leslie, Julia Prado, Andrew Prendergast, John Frater, Noel McCarthy, Christian Brander, Gerald H. Learn, David Nickle, Christine Rousseau, Hoosen Coovadia, James I. Mullins, David Heckerman, Bruce D. Walker, and Philip Goulder. CD8+ T-Cell Responses to Different HIV Proteins Have Discordant Associations with Viral Load. Nat. Med., 13(1):46-53, Jan 2007. PubMed ID: 17173051. Show all entries for this paper.


Displaying record number 59651

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Epitope Name EV10
Species (MHC/HLA) human(A*69)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords rate of progression, optimal epitope

Notes

References

Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.


Displaying record number 59649

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Epitope Name EV10
Species (MHC/HLA) human(B*39)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords rate of progression, optimal epitope

Notes

References

Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.


Displaying record number 59650

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Epitope Name EV10
Species (MHC/HLA) human(C*14)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords rate of progression, optimal epitope

Notes

References

Pereyra2014 Florencia Pereyra, David Heckerman, Jonathan M. Carlson, Carl Kadie, Damien Z. Soghoian, Daniel Karel, Ariel Goldenthal, Oliver B. Davis, Charles E. DeZiel, Tienho Lin, Jian Peng, Alicja Piechocka, Mary Carrington, and Bruce D. Walker. HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes. J. Virol., 88(22):12937-12948, Nov 2014. PubMed ID: 25165115. Show all entries for this paper.


Displaying record number 55804

HXB2 Location Vpr(48-57)
DNA(5700..5729)
Vpr Epitope Map
Author Location Vpr(48-57)
Epitope ETYGDTWTGV Epitope Alignment
ETYGDTWTGV epitope logo
Species (MHC/HLA) human
Immunogen HIV-1 infection
Experimental methods  
Keywords computational epitope prediction, HLA associated polymorphism

Notes

References

Srinivasan2008 Alagarsamy Srinivasan, Velpandi Ayyavoo, Sundarasamy Mahalingam, Aarthi Kannan, Anne Boyd, Debduti Datta, Vaniambadi S. Kalyanaraman, Anthony Cristillo, Ronald G. Collman, Nelly Morellet, Bassel E. Sawaya, and Ramachandran Murali. A Comprehensive Analysis of the Naturally Occurring Polymorphisms in HIV-1 Vpr: Potential Impact on CTL Epitopes. Virol. J., 5:99, 2008. PubMed ID: 18721481. Show all entries for this paper.


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