HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 8 matching records:

Displaying record number 57704

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location Gag
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Show epitope variants
Species (MHC/HLA) human(B*08)
Immunogen HIV-1 infection
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords supervised treatment interruptions (STI), escape

Notes

References

Schweighardt2010 Becky Schweighardt, Terri Wrin, Duncan A. Meiklejohn, Gerald Spotts, Christos J. Petropoulos, Douglas F. Nixon, and Frederick M. Hecht. Immune Escape Mutations Detected within HIV-1 Epitopes Associated with Viral Control During Treatment Interruption. J. Acquir. Immune Defic. Syndr., 53(1):36-46, Jan 2010. PubMed ID: 19910798. Show all entries for this paper.


Displaying record number 58530

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B*08, B*60)
Immunogen HIV-1 infection
Country Canada
Experimental methods Other
Keywords characterizing CD8+ T cells, elite controllers

Notes

References

Peretz2011 Yoav Peretz, Olivia Marra, Réjean Thomas, Danielle Legault, Pierre Côté, Mohamed-Rachid Boulassel, Danielle Rouleau, Jean-Pierre Routy, Rafick-Pierre Sékaly, Christos M Tsoukas, Cécile Tremblay, and Nicole F. Bernard. Relative Contribution of HIV-Specific Functional Lymphocyte Subsets Restricted by Protective and Non-Protective HLA Alleles. Viral Immunol, 24(3):189-198, Jun 2011. PubMed ID: 21668360. Show all entries for this paper.


Displaying record number 61995

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location Gag(93-101)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Species (MHC/HLA) human(B*08:01)
Immunogen peptide-HLA interaction
Experimental methods Intracellular cytokine staining, Other
Keywords assay or method development, NK cells

Notes

References

Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.


Displaying record number 119

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101 LAI)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B60, B8)
Immunogen  
Experimental methods  
Keywords  

Notes

References

Brander1997 Christian Brander and Bruce Walker. Systematic Identification of Optimal HIV-1 CTL Epitopes. In Systematic Identification of Optimal HIV-1 CTL Epitopes. pages IV--1--IV--11. Los Alamos National Laboratory, Theoretical Biology and Biophysics, Los Alamos, New Mexico, 1997. URL: http://hiv-web.lanl.gov/immunology. Show all entries for this paper.


Displaying record number 55562

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Epitope Name EL9
Subtype B
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A*68:01, B51, B8, C*15, Cw7, DQ2, DQ3, DR3, DR4
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords rate of progression, escape, mutation acquisition

Notes

References

Kemal2008 Kimdar Sherefa Kemal, Tara Beattie, Tao Dong, Barbara Weiser, Rupert Kaul, Carla Kuiken, Julian Sutton, Dorothy Lang, Hongbing Yang, Yan Chun Peng, Ronald Collman, Sean Philpott, Sarah Rowland-Jones, and Harold Burger. Transition from Long-Term Nonprogression to HIV-1 Disease Associated with Escape from Cellular Immune Control. J. Acquir. Immune Defic. Syndr., 48(2):119-126, 1 Jun 2008. PubMed ID: 18520675. Show all entries for this paper.


Displaying record number 118

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Experimental methods  
Keywords  

Notes

References

Birk1998 M. Birk, A. Vahlne, A. Sonnerborg, and M. Sallberg. Nonsynonymous Mutations within the Human Immunodeficiency Virus Type 1 p17 Gene Are Clustered to Sequences Binding to the Host Human Leukocyte Antigen Class I Molecules. AIDS Res. Hum. Retroviruses, 14:241-248, 1998. PubMed ID: 9491914. Show all entries for this paper.


Displaying record number 55237

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101 B1 and B2)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Show epitope variants
Subtype B, CRF01_AE
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A3, A32, B62, B8, Cw3
Country Netherlands
Experimental methods Other
Keywords subtype comparisons, computational epitope prediction, superinfection

Notes

References

Kozaczynska2007 Karolina Kozaczynska, Marion Cornelissen, Peter Reiss, Fokla Zorgdrager, and Antoinette C. van der Kuyl. HIV-1 Sequence Evolution In Vivo after Superinfection with Three Viral Strains. Retrovirology, 4:59, 2007. PubMed ID: 17716368. Show all entries for this paper.


Displaying record number 117

Download this epitope record as JSON.

HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope EIKDTKEAL Epitope Alignment
EIKDTKEAL epitope logo
Species (MHC/HLA) human(B8)
Immunogen peptide-HLA interaction
Experimental methods  
Keywords  

Notes

References

DiBrino1994a M. DiBrino, K. C. Parker, J. Shiloach, R. V. Turner, T. Tsuchida, M. Garfield, W. E. Biddison, and J. E. Coligan. Endogenous Peptides with Distinct Amino Acid Anchor Residue Motifs Bind to HLA-A1 and HLA-B8. J. Immunol., 152:620-631, 1994. PubMed ID: 7506728. Show all entries for this paper.


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