HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 4 matching records:

Displaying record number 56600

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HXB2 Location Nef(64-74)
DNA(8986..9018)
Nef Epitope Map
Author Location Nef(65-75)
Epitope EEVGFPVRPQV Epitope Alignment
EEVGFPVRPQV epitope logo
Epitope Name EV11
Subtype C
Species (MHC/HLA) human(B*45:01)
Immunogen HIV-1 infection
Country South Africa, Zambia
Experimental methods  
Keywords viral fitness and reversion, HLA associated polymorphism

Notes

References

Goepfert2008 Paul A. Goepfert, Wendy Lumm, Paul Farmer, Philippa Matthews, Andrew Prendergast, Jonathan M. Carlson, Cynthia A. Derdeyn, Jianming Tang, Richard A. Kaslow, Anju Bansal, Karina Yusim, David Heckerman, Joseph Mulenga, Susan Allen, Philip J. R. Goulder, and Eric Hunter. Transmission of HIV-1 Gag Immune Escape Mutations Is Associated with Reduced Viral Load in Linked Recipients. J. Exp. Med., 205(5):1009-1017, 12 May 2008. PubMed ID: 18426987. Show all entries for this paper.


Displaying record number 61041

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HXB2 Location Nef(64-74)
DNA(8986..9018)
Nef Epitope Map
Author Location Nef(64-74)
Epitope EEVGFPVRPQV Epitope Alignment
EEVGFPVRPQV epitope logo
Subtype C
Species (MHC/HLA) human(B*45:01)
Immunogen HIV-1 infection
Patient MHC/HLA CAP045: A*23:01, A*29:02, B*15:10, B*45:01, C*16:01, C*16:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords computational epitope prediction, escape, acute/early infection, mutation acquisition

Notes

References

Barton2016 John P. Barton, Nilu Goonetilleke, Thomas C. Butler, Bruce D. Walker, Andrew J. McMichael, and Arup K. Chakraborty. Relative Rate and Location of Intra-Host HIV Evolution to Evade Cellular Immunity Are Predictable. Nat. Commun., 7:11660, 23 May 2016. PubMed ID: 27212475. Show all entries for this paper.


Displaying record number 58951

Download this epitope record as JSON.

HXB2 Location Nef(64-74)
DNA(8986..9018)
Nef Epitope Map
Author Location Nef(64-74)
Epitope EEVGFPVRPQV Epitope Alignment
EEVGFPVRPQV epitope logo
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CAP063: A*02:01, A*23:01, B*45:01, C*04:01, C*16:01
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords escape, acute/early infection

Notes

References

Abrahams2013 Melissa-Rose Abrahams, Florette K. Treurnicht, Nobubelo K. Ngandu, Sarah A. Goodier, Jinny C. Marais, Helba Bredell, Ruwayhida Thebus, Debra de Assis Rosa, Koleka Mlisana, Cathal Seoighe, Salim Abdool Karim, Clive M. Gray, and Carolyn Williamson. Rapid, Complex Adaptation of Transmitted HIV-1 Full-Length Genomes in Subtype C-Infected Individuals with Differing Disease Progression. AIDS, 27(4):507-518, 20 Feb 2013. PubMed ID: 23370465. Show all entries for this paper.


Displaying record number 61088

Download this epitope record as JSON.

HXB2 Location Nef(64-74)
DNA(8986..9018)
Nef Epitope Map
Author Location Nef(64-74)
Epitope EEVGFPVRPQV Epitope Alignment
EEVGFPVRPQV epitope logo
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH164: A*02:01, A*29:01, B*44:03, B*45:01, C*07:01, C*16:01
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Other
Keywords computational epitope prediction, escape, acute/early infection, mutation acquisition

Notes

References

Barton2016 John P. Barton, Nilu Goonetilleke, Thomas C. Butler, Bruce D. Walker, Andrew J. McMichael, and Arup K. Chakraborty. Relative Rate and Location of Intra-Host HIV Evolution to Evade Cellular Immunity Are Predictable. Nat. Commun., 7:11660, 23 May 2016. PubMed ID: 27212475. Show all entries for this paper.


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