HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 41 matching records:

Displaying record number 59379

HXB2 Location Gag(6-18)
p17(6-18)
DNA(805..843)
Gag Epitope Map
Author Location p17( pNL4-3)
Epitope SVLSGGELDKWEK Epitope Alignment
SVLSGGELDKWEK epitope logo
Epitope Name SVK13
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59454

HXB2 Location Gag(9-18)
p17(9-18)
DNA(814..843)
Gag Epitope Map
Author Location p17( pNL4-3)
Epitope SGGELDKWEK Epitope Alignment
SGGELDKWEK epitope logo
Epitope Name SGK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59455

HXB2 Location Gag(122-133)
p17(122)-p24(1)
DNA(1153..1188)
Gag Epitope Map
Author Location p17-p24( pNL4-3)
Epitope TGNNSQVSQNYP Epitope Alignment
TGNNSQVSQNYP epitope logo
Epitope Name TP12
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59456

HXB2 Location Gag(126-133)
p17(126)-p24(1)
DNA(1165..1188)
Gag Epitope Map
Author Location p17-p24( pNL4-3)
Epitope SQVSQNYK Epitope Alignment
SQVSQNYK epitope logo
Epitope Name SK9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59457

HXB2 Location Gag(126-133)
p17(126)-p24(1)
DNA(1165..1188)
Gag Epitope Map
Author Location p17-p24( pNL4-3)
Epitope SQVSQNYR Epitope Alignment
SQVSQNYR epitope logo
Epitope Name SR9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59458

HXB2 Location Gag(140-150)
p24(8-18)
DNA(1207..1239)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope GQMVHQAISPR Epitope Alignment
GQMVHQAISPR epitope logo
Epitope Name GR11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59459

HXB2 Location Gag(250-263)
p24(118-131)
DNA(1537..1578)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope MTHNPPIPVGEIYK Epitope Alignment
MTHNPPIPVGEIYK epitope logo
Epitope Name MK14
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59460

HXB2 Location Gag(280-290)
p24(148-158)
DNA(1627..1659)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope TSILDIRQGPK Epitope Alignment
TSILDIRQGPK epitope logo
Epitope Name TSK11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59461

HXB2 Location Gag(281-290)
p24(149-158)
DNA(1630..1659)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope SILDIRQGPK Epitope Alignment
SILDIRQGPK epitope logo
Epitope Name SIK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59462

HXB2 Location Gag(361-380)
p24(229)-p2p7p1p6(17)
DNA(1870..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope RVLAEAMSQVTNPATIMIQK Epitope Alignment
RVLAEAMSQVTNPATIMIQK epitope logo
Epitope Name RK20
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59463

HXB2 Location Gag(364-377)
p2p7p1p6(1-14)
DNA(1879..1920)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope AEAMSQVTNPATIM Epitope Alignment
AEAMSQVTNPATIM epitope logo
Epitope Name AM14
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59464

HXB2 Location Gag(368-377)
p2p7p1p6(5-14)
DNA(1891..1920)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope SQVTNPATIM Epitope Alignment
SQVTNPATIM epitope logo
Epitope Name SM10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59465

HXB2 Location Gag(368-380)
p2p7p1p6(5-17)
DNA(1891..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope SQVTNPATIMIQK Epitope Alignment
SQVTNPATIMIQK epitope logo
Epitope Name SQK13
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59466

HXB2 Location Gag(369-380)
p2p7p1p6(6-17)
DNA(1894..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope QVTNPATIMIQK Epitope Alignment
QVTNPATIMIQK epitope logo
Epitope Name QK12
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59467

HXB2 Location Gag(370-380)
p2p7p1p6(7-17)
DNA(1897..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope VTNPATIMIQK Epitope Alignment
VTNPATIMIQK epitope logo
Epitope Name VK11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59468

HXB2 Location Gag(371-380)
p2p7p1p6(8-17)
DNA(1900..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope TLPATIMIQK Epitope Alignment
TLPATIMIQK epitope logo
Epitope Name TLK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59469

HXB2 Location Gag(371-380)
p2p7p1p6(8-17)
DNA(1900..1929)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope MNPATIMIQK Epitope Alignment
MNPATIMIQK epitope logo
Epitope Name MK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59470

HXB2 Location Gag(374-384)
p2p7p1p6(11-21)
DNA(1909..1941)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope ATIMIQKGNFR Epitope Alignment
ATIMIQKGNFR epitope logo
Epitope Name AR11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59471

HXB2 Location Gag(375-384)
p2p7p1p6(12-21)
DNA(1912..1941)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope TIMIQKGNFR Epitope Alignment
TIMIQKGNFR epitope logo
Epitope Name TR10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59472

HXB2 Location Gag(376-384)
p2p7p1p6(13-21)
DNA(1915..1941)
Gag Epitope Map
Author Location p24( pNL4-3)
Epitope IMIQKGNFR Epitope Alignment
IMIQKGNFR epitope logo
Epitope Name IR9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59473

HXB2 Location Gag(451-463)
p2p7p1p6(88-100)
DNA(2140..2178)
Gag Epitope Map
Author Location p2p7p1p6( pNL4-3)
Epitope SRPEPTAPPEESF Epitope Alignment
SRPEPTAPPEESF epitope logo
Epitope Name SF13
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59474

HXB2 Location Gag(485-493)
p2p7p1p6(122-130)
DNA(2242..2268)
Gag Epitope Map
Author Location p6( pNL4-3)
Epitope PLASLRSLF Epitope Alignment
PLASLRSLF epitope logo
Epitope Name PF9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59475

HXB2 Location Gag(485-500)
p2p7p1p6(122-137)
DNA(2242..2289)
Gag Epitope Map
Author Location p6( pNL4-3)
Epitope PLASLRSLFGSDPSSQ Epitope Alignment
PLASLRSLFGSDPSSQ epitope logo
Epitope Name PQ16
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59476

HXB2 Location Pol(495-505)
RT(340-350)
DNA(3567..3599)
Pol Epitope Map
Author Location Pol( pNL4-3)
Epitope QIYQEPFKNLK Epitope Alignment
QIYQEPFKNLK epitope logo
Epitope Name QK11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59477

HXB2 Location Pol(534-543)
RT(379-388)
DNA(3684..3713)
Pol Epitope Map
Author Location Pol( pNL4-3)
Epitope SIVIWGKTPK Epitope Alignment
SIVIWGKTPK epitope logo
Epitope Name SK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59478

HXB2 Location Pol(827-842)
Integrase(112-127)
DNA(4563..4610)
Pol Epitope Map
Author Location Pol( pNL4-3)
Epitope TVHTDNGSNFTSTTVK Epitope Alignment
TVHTDNGSNFTSTTVK epitope logo
Epitope Name TK16
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59479

HXB2 Location Pol(830-842)
Integrase(115-127)
DNA(4572..4610)
Pol Epitope Map
Author Location Pol( pNL4-3)
Epitope TDNGSNFTSTTVK Epitope Alignment
TDNGSNFTSTTVK epitope logo
Epitope Name TK13
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59480

HXB2 Location Pol(890-901)
Integrase(175-186)
DNA(4752..4787)
Pol Epitope Map
Author Location Pol( pNL4-3)
Epitope AVQMAVFIHNFK Epitope Alignment
AVQMAVFIHNFK epitope logo
Epitope Name AK12
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59481

HXB2 Location Vpu(41-49)
DNA(6182..6208)
Vpu Epitope Map
Author Location Vpu( pNL4-3)
Epitope RLIDRLIER Epitope Alignment
RLIDRLIER epitope logo
Epitope Name RR9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59482

HXB2 Location gp160(828-838)
gp41(317-327)
DNA(8706..8738)
gp160 Epitope Map
Author Location Env( pNL4-3)
Epitope RVIEVLQAAYR Epitope Alignment
RVIEVLQAAYR epitope logo
Epitope Name RR11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59483

HXB2 Location Nef(9-19)
DNA(8821..8853)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope SVIGWPAVRER Epitope Alignment
SVIGWPAVRER epitope logo
Epitope Name SR11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59484

HXB2 Location Nef(11-19)
DNA(8827..8853)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope IGWPAVRER Epitope Alignment
IGWPAVRER epitope logo
Epitope Name IR9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59485

HXB2 Location Nef(12-19)
DNA(8830..8853)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope GWPAVRER Epitope Alignment
GWPAVRER epitope logo
Epitope Name GR8
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59486

HXB2 Location Nef(26-39)
DNA(8872..8913)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope AADGVGAVSRDLEK Epitope Alignment
AADGVGAVSRDLEK epitope logo
Epitope Name AK14
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59487

HXB2 Location Nef(66-82)
DNA(8992..9042)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope VGFPVTPQVPLRPMTYK Epitope Alignment
VGFPVTPQVPLRPMTYK epitope logo
Epitope Name VK17
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59488

HXB2 Location Nef(73-82)
DNA(9013..9042)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope QVPLRPMTYK Epitope Alignment
QVPLRPMTYK epitope logo
Epitope Name QK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59489

HXB2 Location Nef(82-92)
DNA(9040..9072)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope KAAVDLSHFLK Epitope Alignment
KAAVDLSHFLK epitope logo
Epitope Name KK11
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59490

HXB2 Location Nef(83-92)
DNA(9043..9072)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope AAVDLSHFLK Epitope Alignment
AAVDLSHFLK epitope logo
Epitope Name AK10
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59491

HXB2 Location Nef(84-92)
DNA(9046..9072)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope AVDLSHFLK Epitope Alignment
AVDLSHFLK epitope logo
Epitope Name AK9
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59492

HXB2 Location Nef(85-92)
DNA(9049..9072)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope VDLSHFLK Epitope Alignment
VDLSHFLK epitope logo
Epitope Name VK8
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


Displaying record number 59493

HXB2 Location Nef(86-92)
DNA(9052..9072)
Nef Epitope Map
Author Location Nef( pNL4-3)
Epitope DLSHFLK Epitope Alignment
DLSHFLK epitope logo
Epitope Name DK7
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Experimental methods CD8 T-cell Elispot - IFNγ, TCR binding
Keywords assay or method development, novel epitope

Notes

References

Yaciuk2014 Jane C. Yaciuk, Matthew Skaley, Wilfried Bardet, Fredda Schafer, Danijela Mojsilovic, Steven Cate, Christopher J. Stewart, Curtis McMurtrey, Kenneth W. Jackson, Rico Buchli, Alex Olvera, Samandhy Cedeño, Montserrat Plana, Beatriz Mothe, Christian Brander, John T. West, and William H. Hildebrand. Direct Interrogation of Viral Peptides Presented by the Class I HLA of HIV-Infected T Cells. J. Virol., 88(22):12992-13004, Nov 2014. PubMed ID: 25165114. Show all entries for this paper.


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