HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 28 matching records:

Displaying record number 61528

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HXB2 Location Gag(31-41)
p17(31-41)
DNA(880..912)
Gag Epitope Map
Author Location p17(31-41)
Epitope LKHIVWASREL Epitope Alignment
LKHIVWASREL epitope logo
Show epitope variants
Epitope Name Gag LL11
Subtype B
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61529

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HXB2 Location Gag(31-41)
p17(31-41)
DNA(880..912)
Gag Epitope Map
Author Location p17(31-41)
Epitope MKHLVWASREL Epitope Alignment
MKHLVWASREL epitope logo
Show epitope variants
Epitope Name Gag LL11-1M-4L
Subtype CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-388: A*02:06, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61531

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HXB2 Location Gag(39-46)
p17(39-46)
DNA(904..927)
Gag Epitope Map
Author Location p17(39-46)
Epitope RELERFAL Epitope Alignment
RELERFAL epitope logo
Show epitope variants
Epitope Name Gag RV8-8L
Subtype CRF01_AE
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-388: A*02:06, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61530

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HXB2 Location Gag(39-46)
p17(39-46)
DNA(904..927)
Gag Epitope Map
Author Location p17(39-46)
Epitope RELERFAV Epitope Alignment
RELERFAV epitope logo
Show epitope variants
Epitope Name Gag RV8
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61532

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HXB2 Location Gag(210-217)
p24(78-85)
DNA(1417..1440)
Gag Epitope Map
Author Location p24(78-85)
Epitope AEWDRLHP Epitope Alignment
AEWDRLHP epitope logo
Show epitope variants
Epitope Name Gag AP8
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61533

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HXB2 Location Gag(210-217)
p24(78-85)
DNA(1417..1440)
Gag Epitope Map
Author Location p24(78-85)
Epitope AEWDRVHP Epitope Alignment
AEWDRVHP epitope logo
Show epitope variants
Epitope Name Gag p24 AP8-6V
Subtype CRF01_AE
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-388: A*02:06, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61534

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HXB2 Location Gag(210-218)
p24(78-86)
DNA(1417..1443)
Gag Epitope Map
Author Location p24(78-86)
Epitope AEWDRLHPV Epitope Alignment
AEWDRLHPV epitope logo
Show epitope variants
Epitope Name Gag AV9
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61535

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HXB2 Location Gag(210-218)
p24(78-86)
DNA(1417..1443)
Gag Epitope Map
Author Location p24(78-86)
Epitope AEWDRVHPV Epitope Alignment
AEWDRVHPV epitope logo
Show epitope variants
Epitope Name Gag p24 AV9-6V
Subtype CRF01_AE
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-388: A*02:06, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61537

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HXB2 Location Gag(211-221)
p24(79-89)
DNA(1420..1452)
Gag Epitope Map
Author Location p24(79-89)
Epitope EWDRVHPVHAG Epitope Alignment
EWDRVHPVHAG epitope logo
Show epitope variants
Epitope Name Gag p24 EG11-5V
Subtype CRF01_AE
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61536

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HXB2 Location Gag(211-221)
p24(79-89)
DNA(1420..1452)
Gag Epitope Map
Author Location p24(79-89)
Epitope EWDRLHPVHAG Epitope Alignment
EWDRLHPVHAG epitope logo
Show epitope variants
Epitope Name Gag p24 EG11
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61538

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HXB2 Location Gag(275-282)
p24(143-150)
DNA(1612..1635)
Gag Epitope Map
Author Location p24(143-150)
Epitope RMYSPTSI Epitope Alignment
RMYSPTSI epitope logo
Show epitope variants
Epitope Name Gag RI8
Subtype B
Species (MHC/HLA) human(B*52:01)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61539

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HXB2 Location Gag(275-282)
p24(143-150)
DNA(1612..1635)
Gag Epitope Map
Author Location p24(143-150)
Epitope RMYSPVSI Epitope Alignment
RMYSPVSI epitope logo
Show epitope variants
Epitope Name Gag p24 RI8-6V
Subtype CRF01_AE
Species (MHC/HLA) human(B*52:01)
Immunogen HIV-1 infection
Patient MHC/HLA KI-724: B*52:01, C*01:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61540

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HXB2 Location Gag(277-285)
p24(145-153)
DNA(1618..1644)
Gag Epitope Map
Author Location p24(145-153)
Epitope YSPTSILDI Epitope Alignment
YSPTSILDI epitope logo
Show epitope variants
Epitope Name Gag YI9
Subtype B
Species (MHC/HLA) human(C*01:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61541

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HXB2 Location Gag(277-285)
p24(145-153)
DNA(1618..1644)
Gag Epitope Map
Author Location p24(145-153)
Epitope YSPVSILDI Epitope Alignment
YSPVSILDI epitope logo
Show epitope variants
Epitope Name Gag YI9-4V
Subtype CRF01_AE
Species (MHC/HLA) human(C*01:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-724: B*52:01, C*01:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61546

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HXB2 Location Gag(341-349)
p24(209-217)
DNA(1810..1836)
Gag Epitope Map
Author Location p24(207-219)
Epitope ATLEEMMTA Epitope Alignment
ATLEEMMTA epitope logo
Epitope Name Gag AA9
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-648: A*02:06
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61547

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HXB2 Location Pol(282-290)
RT(127-135)
DNA(2928..2954)
Pol Epitope Map
Author Location RT(127-135)
Epitope YTAFTIPSI Epitope Alignment
YTAFTIPSI epitope logo
Epitope Name Pol YI9
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-648: A*02:06
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61548

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HXB2 Location Pol(423-431)
RT(268-276)
DNA(3351..3377)
Pol Epitope Map
Author Location RT(268-276)
Epitope SQIYAGIKV Epitope Alignment
SQIYAGIKV epitope logo
Epitope Name Pol SV9
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-964: A*02:06
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61542

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HXB2 Location Pol(595-603)
RT(440-448)
DNA(3867..3893)
Pol Epitope Map
Author Location RT(440-448)
Epitope FYVDGAANR Epitope Alignment
FYVDGAANR epitope logo
Show epitope variants
Epitope Name Pol RT FR9
Subtype B
Species (MHC/HLA) human(A*33:03)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61543

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HXB2 Location Pol(595-603)
RT(440-448)
DNA(3867..3893)
Pol Epitope Map
Author Location RT(440-448)
Epitope FYVDGAASR Epitope Alignment
FYVDGAASR epitope logo
Show epitope variants
Epitope Name Pol RT FR9-8S
Subtype CRF01_AE
Species (MHC/HLA) human(A*33:03)
Immunogen HIV-1 infection
Patient MHC/HLA KI-632: A*24:02, A*33:03
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61549

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HXB2 Location Pol(767-775)
Integrase(52-60)
DNA(4383..4409)
Pol Epitope Map
Author Location Integrase(50-60)
Epitope GQVDCSPGI Epitope Alignment
GQVDCSPGI epitope logo
Epitope Name Pol GI9
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-388: A*02:06, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61550

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HXB2 Location Pol(809-817)
Integrase(94-102)
DNA(4509..4535)
Pol Epitope Map
Author Location Integrase(94-102)
Epitope GQETAYFLL Epitope Alignment
GQETAYFLL epitope logo
Epitope Name Pol GL9
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-964: A*02:06
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61551

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HXB2 Location Pol(872-881)
Integrase(157-166)
DNA(4698..4727)
Pol Epitope Map
Author Location Integrase(157-166)
Epitope ELKKIIGQVR Epitope Alignment
ELKKIIGQVR epitope logo
Epitope Name Pol ER10
Subtype B, CRF01_AE
Species (MHC/HLA) human(A*33:03)
Immunogen HIV-1 infection
Patient MHC/HLA KI-632: A*24:02, A*33:03
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords optimal epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61545

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HXB2 Location Pol(912-919)
Integrase(197-204)
DNA(4818..4841)
Pol Epitope Map
Author Location Integrase(197-204)
Epitope GERIIDII Epitope Alignment
GERIIDII epitope logo
Show epitope variants
Epitope Name Pol GI8-5I
Subtype CRF01_AE
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-837: A*02:01, B*40:02
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61544

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HXB2 Location Pol(912-919)
Integrase(197-204)
DNA(4818..4841)
Pol Epitope Map
Author Location Integrase(197-204)
Epitope GERIVDII Epitope Alignment
GERIVDII epitope logo
Show epitope variants
Epitope Name Pol GI8
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61525

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HXB2 Location Nef(83-91)
DNA(9043..9069)
Nef Epitope Map
Author Location Nef(83-91)
Epitope GAFDLSFFL Epitope Alignment
GAFDLSFFL epitope logo
Show epitope variants
Epitope Name Nef GL9-3F-7F
Subtype CRF01_AE
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Patient MHC/HLA KI-648: A*02:06
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61524

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HXB2 Location Nef(83-91)
DNA(9043..9069)
Nef Epitope Map
Author Location Nef(83-91)
Epitope GALDLSHFL Epitope Alignment
GALDLSHFL epitope logo
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Epitope Name Nef GL9
Subtype B
Species (MHC/HLA) human(A*02:06)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61527

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HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLCFGWCF Epitope Alignment
RYPLCFGWCF epitope logo
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Epitope Name Nef RF10-5C
Subtype B
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA KI-632: A*24:02, A*33:03
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


Displaying record number 61526

Download this epitope record as JSON.

HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLTFGWCF Epitope Alignment
RYPLTFGWCF epitope logo
Show epitope variants
Epitope Name Nef RF10
Subtype B
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords subtype comparisons, variant cross-reactivity, optimal epitope, novel epitope, chronic infection

Notes

References

Watanabe2013 Koji Watanabe, Hayato Murakoshi, Yoshiko Tamura, Madoka Koyanagi, Takayuki Chikata, Hiroyuki Gatanaga, Shinichi Oka, and Masafumi Takiguchi. Identification of Cross-Clade CTL Epitopes in HIV-1 Clade A/E-Infected Individuals by Using the Clade B Overlapping Peptides. Microbes Infect., 15(13):874-886, Nov 2013. PubMed ID: 23968885. Show all entries for this paper.


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