HIV molecular immunology database
Found 18 matching records:
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HXB2 Location | Gag(77-85) p17(77-85) DNA(1018..1044) |
Gag Epitope Map |
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Author Location | p17(77-85 93TH253 subtype CRF01) | |
Epitope |
SLYNTIATL
|
Epitope Alignment
|
Epitope Name | G77-85 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Gag(82-91) p17(82-91) DNA(1033..1062) |
Gag Epitope Map |
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Author Location | p17(82-91 93TH253 subtype CRF01) | |
Epitope |
IATLWCVHQR
|
Epitope Alignment
|
Epitope Name | G82-91 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative, HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(248-257) RT(93-102) DNA(2826..2855) |
Pol Epitope Map |
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Author Location | Pol(240-249 93TH253 subtype CRF01) | |
Epitope |
GIPHPAGLKK
|
Epitope Alignment
|
Epitope Name | P248-257 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(272-281) RT(117-126) DNA(2898..2927) |
Pol Epitope Map |
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Author Location | Pol(264-273 93TH253 subtype CRF01) | |
Epitope |
SVPLDESFRK
|
Epitope Alignment
|
Epitope Name | P272-281 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(313-321) RT(158-166) DNA(3021..3047) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(305-313 93TH253 subtype CRF01) | |
Epitope |
AIFQSSMTK
|
Epitope Alignment
|
Epitope Name | P313-321 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative, HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(334-342) RT(179-187) DNA(3084..3110) |
Pol Epitope Map |
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Author Location | Pol(339-347 93TH253 subtype CRF01) | |
Epitope |
VIYQYMDDL
|
Epitope Alignment
|
Epitope Name | P334-342 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(464-472) RT(309-317) DNA(3474..3500) |
Pol Epitope Map |
---|---|---|
Author Location | Pol( 93TH253 subtype CRF01) | |
Epitope |
ILRIPVHGV
|
Epitope Alignment
|
Epitope Name | P464-472 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(495-505) RT(340-350) DNA(3567..3599) |
Pol Epitope Map |
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Author Location | Pol(487-497 93TH253 subtype CRF01) | |
Epitope |
QIYQEPFKNLK
|
Epitope Alignment
|
Epitope Name | P495-505 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative, HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Pol(571-579) RT(416-424) DNA(3795..3821) |
Pol Epitope Map |
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Author Location | Pol(563-571 93TH253 subtype CRF01) | |
Epitope |
FVNTPPLVK
|
Epitope Alignment
|
Epitope Name | P571-579 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(6-12) gp120(6-12) DNA(6240..6260) |
gp160 Epitope Map |
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Author Location | gp120(6-15 CM243 subtype CRF01) | |
Epitope |
TQMNWPNLWK
|
Epitope Alignment
|
Epitope Name | E6-15 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(36-46) gp120(36-46) DNA(6330..6362) |
gp160 Epitope Map |
---|---|---|
Author Location | gp120(36-46 CM243 subtype CRF01) | |
Epitope |
VTVYYGVPVWR
|
Epitope Alignment
|
Epitope Name | E36-4 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(191-200) gp120(191-200) DNA(6795..6824) |
gp160 Epitope Map |
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Author Location | gp120(194-202 CM243 subtype CRF01) | |
Epitope |
YRLINCNTSV
|
Epitope Alignment
|
Epitope Name | E191-200 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(309-318) gp120(309-318) DNA(7149..7178) |
gp160 Epitope Map |
---|---|---|
Author Location | gp120(314-323 CM243 subtype CRF01) | |
Epitope |
ITVGPGQVFY
|
Epitope Alignment
|
Epitope Name | E309-318 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(340-348) gp120(340-348) DNA(7242..7268) |
gp160 Epitope Map |
---|---|---|
Author Location | gp120(346-354 CM243 subtype CRF01) | |
Epitope |
RVLKQVTEK
|
Epitope Alignment
|
Epitope Name | E340-348 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(747-755) gp41(236-244) DNA(8463..8489) |
gp160 Epitope Map |
---|---|---|
Author Location | gp41(741-749 CM243 subtype CRF01) | |
Epitope |
RLVSGFLAL
|
Epitope Alignment
|
Epitope Name | E747-755 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | gp160(813-822) gp41(302-311) DNA(8661..8690) |
gp160 Epitope Map |
---|---|---|
Author Location | gp41(814-823 CM243 subtype CRF01) | |
Epitope |
SLLNATAIAV
|
Epitope Alignment
|
Epitope Name | E813-82 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Nef(73-82) DNA(9013..9042) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(71-80 93TH253 subtype CRF01) | |
Epitope |
QVPLRPMTYK
|
Epitope Alignment
|
Epitope Name | N73-82 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 exposed seronegative, HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.
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HXB2 Location | Nef(83-92) DNA(9043..9072) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(81-90 93TH253 subtype CRF01) | |
Epitope |
GAFDLSFFLK
|
Epitope Alignment
|
Epitope Name | N83-92 | |
Subtype | CRF01_AE | |
Species (MHC/HLA) | human(A11) | |
Immunogen | HIV-1 infection | |
Experimental methods | ||
Keywords | HIV exposed persistently seronegative (HEPS) |
Sriwanthana2001 B. Sriwanthana, T. Hodge, T. D. Mastro, C. S. Dezzutti, K. Bond, H. A. Stephens, L. G. Kostrikis, K. Limpakarnjanarat, N. L. Young, S. H. Qari, R. B. Lal, D. Chandanayingyong, and J. M. McNicholl. HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res. Hum. Retroviruses, 17(8):719-34, 20 May 2001. PubMed ID: 11429112. Show all entries for this paper.