HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 9 matching records:

Displaying record number 59377

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HXB2 Location Gag(21-29)
p17(21-29)
DNA(850..876)
Gag Epitope Map
Author Location  
Epitope LRPGGKKKY Epitope Alignment
LRPGGKKKY epitope logo
Species (MHC/HLA) human(C*06:02)
Immunogen HIV-1 infection
Patient MHC/HLA P08: A*01:01, B*37:01, B*44:02, C*05:01, C*06:02
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59378

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location  
Epitope DVKDTKEAL Epitope Alignment
DVKDTKEAL epitope logo
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA C02: A*02:01, A*32:01, B*08:01, B*18:01, C*07:01
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59376

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HXB2 Location Pol(197-205)
RT(42-50)
DNA(2673..2699)
Pol Epitope Map
Author Location  
Epitope EKEGKISKI Epitope Alignment
EKEGKISKI epitope logo
Species (MHC/HLA) human(B*49:01)
Immunogen HIV-1 infection
Patient MHC/HLA T06: A*01:01, A*30:04, B*08:01, B*49:01, C*07:01
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59370

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HXB2 Location Pol(334-344)
RT(179-189)
DNA(3084..3116)
Pol Epitope Map
Author Location  
Epitope VIYQYMDDLYV Epitope Alignment
VIYQYMDDLYV epitope logo
Epitope Name VV11
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA T31: A*02:01, A*02:02, B*35:01, B*49:01, C*04:01, C*07:01
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59371

Download this epitope record as JSON.

HXB2 Location Pol(336-344)
RT(181-189)
DNA(3090..3116)
Pol Epitope Map
Author Location  
Epitope YQYMDDLYV Epitope Alignment
YQYMDDLYV epitope logo
Epitope Name YV9
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA T32: A*02:01, A*25:01, B*44:02, C*05:01, C*07:04
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59372

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HXB2 Location Pol(706-715)
RT(551-560)
DNA(4200..4229)
Pol Epitope Map
Author Location  
Epitope LVSAGIRKVL Epitope Alignment
LVSAGIRKVL epitope logo
Species (MHC/HLA) human(C*06:02)
Immunogen HIV-1 infection
Patient MHC/HLA P08: A*01:01, B*37:01, B*44:02, C*05:01, C*06:02
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59374

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HXB2 Location Nef(74-81)
DNA(9016..9039)
Nef Epitope Map
Author Location  
Epitope VPLRPMTY Epitope Alignment
VPLRPMTY epitope logo
Epitope Name VY8
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA P05: A*24:02, A*31:01, B*35:01, B*35:08, C*04:01
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59375

Download this epitope record as JSON.

HXB2 Location Nef(134-141)
DNA(9196..9219)
Nef Epitope Map
Author Location  
Epitope RYPLTFGW Epitope Alignment
RYPLTFGW epitope logo
Epitope Name RW8
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA P07: A*24:02, A*68:01, B*18:01, B*35:01, C*07:01, C*07:04
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


Displaying record number 59373

Download this epitope record as JSON.

HXB2 Location Nef(187-195)
DNA(9355..9381)
Nef Epitope Map
Author Location  
Epitope SRLAFNHMA Epitope Alignment
SRLAFNHMA epitope logo
Species (MHC/HLA) human(B*39:01)
Immunogen HIV-1 infection
Patient MHC/HLA P02: A*03:01, A*25:01, B*35:01, B*39:01, C*04:01, C*12:03
Country Germany
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords computational epitope prediction, optimal epitope

Notes

References

Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.


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