HIV molecular immunology database
Found 9 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(21-29) p17(21-29) DNA(850..876) |
Gag Epitope Map |
---|---|---|
Author Location | ||
Epitope |
LRPGGKKKY
|
Epitope Alignment
|
Species (MHC/HLA) | human(C*06:02) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | P08: A*01:01, B*37:01, B*44:02, C*05:01, C*06:02 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(93-101) p17(93-101) DNA(1066..1092) |
Gag Epitope Map |
---|---|---|
Author Location | ||
Epitope |
DVKDTKEAL
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | C02: A*02:01, A*32:01, B*08:01, B*18:01, C*07:01 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(197-205) RT(42-50) DNA(2673..2699) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
EKEGKISKI
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*49:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | T06: A*01:01, A*30:04, B*08:01, B*49:01, C*07:01 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(334-344) RT(179-189) DNA(3084..3116) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VIYQYMDDLYV
|
Epitope Alignment
|
Epitope Name | VV11 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | T31: A*02:01, A*02:02, B*35:01, B*49:01, C*04:01, C*07:01 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(336-344) RT(181-189) DNA(3090..3116) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
YQYMDDLYV
|
Epitope Alignment
|
Epitope Name | YV9 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | T32: A*02:01, A*25:01, B*44:02, C*05:01, C*07:04 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(706-715) RT(551-560) DNA(4200..4229) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
LVSAGIRKVL
|
Epitope Alignment
|
Species (MHC/HLA) | human(C*06:02) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | P08: A*01:01, B*37:01, B*44:02, C*05:01, C*06:02 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(74-81) DNA(9016..9039) |
Nef Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VPLRPMTY
|
Epitope Alignment
|
Epitope Name | VY8 | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | P05: A*24:02, A*31:01, B*35:01, B*35:08, C*04:01 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(134-141) DNA(9196..9219) |
Nef Epitope Map |
---|---|---|
Author Location | ||
Epitope |
RYPLTFGW
|
Epitope Alignment
|
Epitope Name | RW8 | |
Species (MHC/HLA) | human(A*24:02) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | P07: A*24:02, A*68:01, B*18:01, B*35:01, C*07:01, C*07:04 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(187-195) DNA(9355..9381) |
Nef Epitope Map |
---|---|---|
Author Location | ||
Epitope |
SRLAFNHMA
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*39:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | P02: A*03:01, A*25:01, B*35:01, B*39:01, C*04:01, C*12:03 | |
Country | Germany | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | computational epitope prediction, optimal epitope |
Roider2014 Julia Roider, Tim Meissner, Franziska Kraut, Thomas Vollbrecht, Renate Stirner, Johannes R. Bogner, and Rika Draenert. Comparison of Experimental Fine-Mapping to In Silico Prediction Results of HIV-1 Epitopes Reveals Ongoing Need for Mapping Experiments. Immunology, 143(2):193-201, Oct 2014. PubMed ID: 24724694. Show all entries for this paper.