HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 9 matching records:

Displaying record number 59383

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HXB2 Location Gag(25-34)
p17(25-34)
DNA(862..891)
Gag Epitope Map
Author Location Gag(25-34)
Epitope GKKPYMLKHL Epitope Alignment
GKKPYMLKHL epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59384

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HXB2 Location Gag(180-188)
p24(48-56)
DNA(1327..1353)
Gag Epitope Map
Author Location Gag(180-188)
Epitope TPQDLNTML Epitope Alignment
TPQDLNTML epitope logo
Subtype C
Species (MHC/HLA) human(B*42, B*81)
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59385

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HXB2 Location Pol(426-434)
RT(271-279)
DNA(3360..3386)
Pol Epitope Map
Author Location Pol(426-434)
Epitope YPGIKVRQL Epitope Alignment
YPGIKVRQL epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human(B*42, B*81)
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59386

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HXB2 Location Vif(73-81)
DNA(5257..5283)
Vif Epitope Map
Author Location Vif(73-81)
Epitope QPGERAWHL Epitope Alignment
QPGERAWHL epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59387

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HXB2 Location Rev(12-20)
DNA(6003..6029)
Rev Epitope Map
Author Location Rev(12-20)
Epitope LLQAVRIIK Epitope Alignment
LLQAVRIIK epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59388

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HXB2 Location gp160(209-217)
gp120(209-217)
DNA(6849..6875)
gp160 Epitope Map
Author Location Env(209-217)
Epitope SFDPIPIHF Epitope Alignment
SFDPIPIHF epitope logo
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59389

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HXB2 Location Nef(19-27)
DNA(8851..8877)
Nef Epitope Map
Author Location Nef(19-27)
Epitope RIRRTAPTA Epitope Alignment
RIRRTAPTA epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 61631

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HXB2 Location Nef(19-27)
DNA(8851..8877)
Nef Epitope Map
Author Location Nef(19-27)
Epitope RIRRTAQAA Epitope Alignment
RIRRTAQAA epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


Displaying record number 59390

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HXB2 Location Nef(68-76)
DNA(8998..9024)
Nef Epitope Map
Author Location Nef(68-76)
Epitope FPVRPQVPL Epitope Alignment
FPVRPQVPL epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH078: A*01, A*30, B*42, B*81, C*17, C*18
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Flow cytometric T-cell cytokine assay
Keywords dynamics, escape, superinfection

Notes

References

Ritchie2014 Adam John Ritchie, Fangping Cai, Nicola M. G. Smith, Sheri Chen, Hongshuo Song, Simon Brackenridge, Salim S. Abdool Karim, Bette T. Korber, Andrew J. McMichael, Feng Gao, and Nilu Goonetilleke. Recombination-Mediated Escape from Primary CD8+ T Cells in Acute HIV-1 Infection. Retrovirology, 11:69, 2014. PubMed ID: 25212771. Show all entries for this paper.


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