HIV molecular immunology database
Found 7 matching records:
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HXB2 Location | Gag(147-155) p24(15-23) DNA(1228..1254) |
Gag Epitope Map |
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Author Location | Gag(147-155) | |
Epitope |
ISPRTLNAW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(B57) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30:01, A*66, B*42:01, B*58:02, C*06:02, C*17:01; A*66, A*68, B*57, B*58:02, C*06:02, C*07:01 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | epitope processing, responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
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HXB2 Location | Gag(240-249) p24(108-117) DNA(1507..1536) |
Gag Epitope Map |
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Author Location | Gag(240-249) | |
Epitope |
TSTLQEQIAW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(B57) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30:01, A*66, B*42:01, B*58:02, C*06:02, C*17:01; A*66, A*68, B*57, B*58:02, C*06:02, C*07:01 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
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HXB2 Location | Gag(263-272) p24(131-140) DNA(1576..1605) |
Gag Epitope Map |
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Author Location | Gag(263-272) | |
Epitope |
KRWIILGLNK
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B | |
Species (MHC/HLA) | human(B27) | |
Immunogen | HIV-1 infection | |
Country | Barbados | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
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HXB2 Location | Nef(73-82) DNA(9013..9042) |
Nef Epitope Map |
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Author Location | Nef(73-82) | |
Epitope |
QVPLRPMTYK
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(A3) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*03:01, A*74:01, B*15:10, B*35:01, C*04:01; A*03:01, A*68, B*07:02, B*15:10, C*04:01, C*07:02 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
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HXB2 Location | Nef(82-90) DNA(9040..9066) |
Nef Epitope Map |
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Author Location | Nef(82-90) | |
Epitope |
KAAFDLSFF
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(B57) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30:01, A*66, B*42:01, B*58:02, C*06:02, C*17:01; A*66, A*68, B*57, B*58:02, C*06:02, C*07:01 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
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HXB2 Location | Nef(116-124) DNA(9142..9168) |
Nef Epitope Map |
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Author Location | Nef(116-124) | |
Epitope |
HTQGYFPDW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(B57) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30:01, A*66, B*42:01, B*58:02, C*06:02, C*17:01; A*66, A*68, B*57, B*58:02, C*06:02, C*07:01 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(128-137) DNA(9178..9207) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(128-137) | |
Epitope |
TPGPGVRYPL
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | C | |
Species (MHC/HLA) | human(B*42:01) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A*30, A*30:01, B*15:03, B*42:01, C*02:02, C*17:01; A*03:01, A*30:01, B*42:01, B*58:02, C*06:02, C*17:01 | |
Country | South Africa | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | responses in children, mother-to-infant transmission, escape, acute/early infection |
Pillay2005 Thillagavathie Pillay, Hua-Tang Zhang, Jan W. Drijfhout, Nicola Robinson, Helen Brown, Munira Khan, Jagadesa Moodley, Miriam Adhikari, Katja Pfafferott, Margaret E. Feeney, Anne St. John, Edward C. Holmes, Hoosen M. Coovadia, Paul Klenerman, Philip J. R. Goulder, and Rodney E. Phillips. Unique Acquisition of Cytotoxic T-Lymphocyte Escape Mutants in Infant Human Immunodeficiency Virus Type 1 Infection. J. Virol., 79(18):12100-12105, Sep 2005. PubMed ID: 16140787. Show all entries for this paper.