HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 42 matching records:

Displaying record number 62179

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HXB2 Location Gag(17-31)
p17(17-31)
DNA(838..882)
Gag Epitope Map
Author Location  
Epitope EKIRLRPGGKKKYRL Epitope Alignment
EKIRLRPGGKKKYRL epitope logo
Epitope Name GAG-5
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62198

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HXB2 Location Gag(140-154)
p24(8-22)
DNA(1207..1251)
Gag Epitope Map
Author Location  
Epitope GQMVHQAISPRTLNA Epitope Alignment
GQMVHQAISPRTLNA epitope logo
Epitope Name GAG-38
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62141

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HXB2 Location Gag(141-155)
p24(9-23)
DNA(1210..1254)
Gag Epitope Map
Author Location  
Epitope QMVHQAISPRTLNAW Epitope Alignment
QMVHQAISPRTLNAW epitope logo
Show epitope variants
Epitope Name MOS-3
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62142

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HXB2 Location Gag(141-155)
p24(9-23)
DNA(1210..1254)
Gag Epitope Map
Author Location  
Epitope QMVHQALSPRTLNAW Epitope Alignment
QMVHQALSPRTLNAW epitope logo
Show epitope variants
Epitope Name MOS-202
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62193

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HXB2 Location Gag(200-214)
p24(68-82)
DNA(1387..1431)
Gag Epitope Map
Author Location  
Epitope MLKDTINEEAAEWDR Epitope Alignment
MLKDTINEEAAEWDR epitope logo
Epitope Name GAG-53
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62147

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HXB2 Location Gag(201-214)
p24(69-82)
DNA(1390..1431)
Gag Epitope Map
Author Location  
Epitope LKETINEEAAEWDR Epitope Alignment
LKETINEEAAEWDR epitope logo
Epitope Name MOS-217
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62194

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HXB2 Location Gag(204-218)
p24(72-86)
DNA(1399..1443)
Gag Epitope Map
Author Location  
Epitope TINEEAAEWDRLHPV Epitope Alignment
TINEEAAEWDRLHPV epitope logo
Epitope Name GAG-54
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62137

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HXB2 Location Gag(205-219)
p24(73-87)
DNA(1402..1446)
Gag Epitope Map
Author Location  
Epitope INEEAAEWDRVHPVH Epitope Alignment
INEEAAEWDRVHPVH epitope logo
Show epitope variants
Epitope Name MOS-19
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62139

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HXB2 Location Gag(205-219)
p24(73-87)
DNA(1402..1446)
Gag Epitope Map
Author Location  
Epitope INEEAAEWDRLHPVH Epitope Alignment
INEEAAEWDRLHPVH epitope logo
Show epitope variants
Epitope Name MOS-218
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62195

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HXB2 Location Gag(208-222)
p24(76-90)
DNA(1411..1455)
Gag Epitope Map
Author Location  
Epitope EAAEWDRLHPVHAGP Epitope Alignment
EAAEWDRLHPVHAGP epitope logo
Epitope Name GAG-55
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62140

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HXB2 Location Gag(209-223)
p24(77-91)
DNA(1414..1458)
Gag Epitope Map
Author Location  
Epitope AAEWDRLHPVHAGPI Epitope Alignment
AAEWDRLHPVHAGPI epitope logo
Show epitope variants
Epitope Name MOS-219
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62138

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HXB2 Location Gag(209-223)
p24(77-91)
DNA(1414..1458)
Gag Epitope Map
Author Location  
Epitope AAEWDRVHPVHAGPI Epitope Alignment
AAEWDRVHPVHAGPI epitope logo
Show epitope variants
Epitope Name MOS-20
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62182

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HXB2 Location Gag(238-252)
p24(106-120)
DNA(1501..1545)
Gag Epitope Map
Author Location  
Epitope GTTSTLQEQIAWMTS Epitope Alignment
GTTSTLQEQIAWMTS epitope logo
Epitope Name GAG-63
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62186

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HXB2 Location Gag(421-435)
p2p7p1p6(58-72)
DNA(2050..2094)
Gag Epitope Map
Author Location  
Epitope HQMKDCTERQANFLG Epitope Alignment
HQMKDCTERQANFLG epitope logo
Epitope Name GAG-113
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62187

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HXB2 Location Gag(425-439)
p2p7p1p6(62-76)
DNA(2062..2106)
Gag Epitope Map
Author Location  
Epitope DCTERQANFLGKIWP Epitope Alignment
DCTERQANFLGKIWP epitope logo
Epitope Name GAG-114
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62192

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HXB2 Location Pol(209-223)
RT(54-68)
DNA(2709..2753)
Pol Epitope Map
Author Location  
Epitope NPYNTPVFAIKKKDS Epitope Alignment
NPYNTPVFAIKKKDS epitope logo
Epitope Name POL-53
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62149

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HXB2 Location Pol(310-324)
RT(155-169)
DNA(3012..3056)
Pol Epitope Map
Author Location  
Epitope GSPAIFQSSMTKILE Epitope Alignment
GSPAIFQSSMTKILE epitope logo
Epitope Name MOS-125
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62190

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HXB2 Location Pol(393-407)
RT(238-252)
DNA(3261..3305)
Pol Epitope Map
Author Location  
Epitope KWTVQPIVLPEKDSW Epitope Alignment
KWTVQPIVLPEKDSW epitope logo
Epitope Name POL-99
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62180

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HXB2 Location Pol(493-507)
RT(338-352)
DNA(3561..3605)
Pol Epitope Map
Author Location  
Epitope TYQIYQEPFKNLKTG Epitope Alignment
TYQIYQEPFKNLKTG epitope logo
Epitope Name POL-124
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62184

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HXB2 Location Pol(589-603)
RT(434-448)
DNA(3849..3893)
Pol Epitope Map
Author Location  
Epitope IVGAETFYVDGAANR Epitope Alignment
IVGAETFYVDGAANR epitope logo
Epitope Name POL-148
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62185

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HXB2 Location Pol(593-607)
RT(438-452)
DNA(3861..3905)
Pol Epitope Map
Author Location  
Epitope ETFYVDGAANRETKL Epitope Alignment
ETFYVDGAANRETKL epitope logo
Epitope Name POL-149
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62191

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HXB2 Location Pol(869-883)
Integrase(154-168)
DNA(4689..4733)
Pol Epitope Map
Author Location  
Epitope MNKELKKIIGQVRDQ Epitope Alignment
MNKELKKIIGQVRDQ epitope logo
Epitope Name POL-218
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62148

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HXB2 Location Pol(936-950)
Integrase(221-235)
DNA(4890..4934)
Pol Epitope Map
Author Location  
Epitope QNFRVYYRDSRDPIW Epitope Alignment
QNFRVYYRDSRDPIW epitope logo
Epitope Name MOS-185
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62188

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HXB2 Location Pol(937-951)
Integrase(222-236)
DNA(4893..4937)
Pol Epitope Map
Author Location  
Epitope NFRVYYRDSRDPLWK Epitope Alignment
NFRVYYRDSRDPLWK epitope logo
Epitope Name POL-235
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62196

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HXB2 Location Pol(965-979)
Integrase(250-264)
DNA(4977..5021)
Pol Epitope Map
Author Location  
Epitope VIQDNSDIKVVPRRK Epitope Alignment
VIQDNSDIKVVPRRK epitope logo
Epitope Name POL-242
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62197

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HXB2 Location Pol(969-983)
Integrase(254-268)
DNA(4989..5033)
Pol Epitope Map
Author Location  
Epitope NSDIKVVPRRKAKII Epitope Alignment
NSDIKVVPRRKAKII epitope logo
Epitope Name POL-243
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62199

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HXB2 Location Pol(969-983)
Integrase(254-268)
DNA(4989..5033)
Pol Epitope Map
Author Location  
Epitope NSDIKVVPRRKAKII Epitope Alignment
NSDIKVVPRRKAKII epitope logo
Epitope Name POL-244
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62144

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HXB2 Location Pol(972-986)
Integrase(257-271)
DNA(4998..5042)
Pol Epitope Map
Author Location  
Epitope IKVVPRRKAKIIRDY Epitope Alignment
IKVVPRRKAKIIRDY epitope logo
Show epitope variants
Epitope Name MOS-398
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62143

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HXB2 Location Pol(972-986)
Integrase(257-271)
DNA(4998..5042)
Pol Epitope Map
Author Location  
Epitope IKVVPRRKVKIIKDY Epitope Alignment
IKVVPRRKVKIIKDY epitope logo
Show epitope variants
Epitope Name MOS-194
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62146

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HXB2 Location Pol(976-990)
Integrase(261-275)
DNA(5010..5054)
Pol Epitope Map
Author Location  
Epitope PRRKAKIIRDYGKQM Epitope Alignment
PRRKAKIIRDYGKQM epitope logo
Show epitope variants
Epitope Name MOS-399
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62145

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HXB2 Location Pol(976-990)
Integrase(261-275)
DNA(5010..5054)
Pol Epitope Map
Author Location  
Epitope PRRKVKIIKDYGKQM Epitope Alignment
PRRKVKIIKDYGKQM epitope logo
Show epitope variants
Epitope Name MOS-195
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62200

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HXB2 Location Pol(977-991)
Integrase(262-276)
DNA(5013..5057)
Pol Epitope Map
Author Location  
Epitope RRKAKIIRDYGKQMA Epitope Alignment
RRKAKIIRDYGKQMA epitope logo
Epitope Name POL-245
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62181

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HXB2 Location Nef(63-77)
DNA(8983..9027)
Nef Epitope Map
Author Location  
Epitope EEEVGFPVRPQVPLR Epitope Alignment
EEEVGFPVRPQVPLR epitope logo
Epitope Name NEF-17
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62205

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HXB2 Location Nef(71-85)
DNA(9007..9051)
Nef Epitope Map
Author Location  
Epitope RPQVPLRPMTYKAAL Epitope Alignment
RPQVPLRPMTYKAAL epitope logo
Epitope Name NEF-19
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62206

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HXB2 Location Nef(79-92)
DNA(9031..9072)
Nef Epitope Map
Author Location  
Epitope MTYKAALDLSHFLK Epitope Alignment
MTYKAALDLSHFLK epitope logo
Epitope Name NEF-21
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62201

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HXB2 Location Nef(86-100)
DNA(9052..9096)
Nef Epitope Map
Author Location  
Epitope DLSHFLKEKGGLEGL Epitope Alignment
DLSHFLKEKGGLEGL epitope logo
Epitope Name NEF-23
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62202

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HXB2 Location Nef(90-104)
DNA(9064..9108)
Nef Epitope Map
Author Location  
Epitope FLKEKGGLEGLIYSK Epitope Alignment
FLKEKGGLEGLIYSK epitope logo
Epitope Name NEF-24
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62203

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HXB2 Location Nef(112-126)
DNA(9130..9174)
Nef Epitope Map
Author Location  
Epitope LWVYHTQGYFPDWQN Epitope Alignment
LWVYHTQGYFPDWQN epitope logo
Epitope Name NEF-30
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62204

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HXB2 Location Nef(116-130)
DNA(9142..9186)
Nef Epitope Map
Author Location  
Epitope HTQGYFPDWQNYTPG Epitope Alignment
HTQGYFPDWQNYTPG epitope logo
Epitope Name NEF-31
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62183

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HXB2 Location Nef(131-145)
DNA(9187..9231)
Nef Epitope Map
Author Location  
Epitope PGIRYPLTFGWCFKL Epitope Alignment
PGIRYPLTFGWCFKL epitope logo
Epitope Name NEF-35
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62207

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HXB2 Location Nef(135-148)
DNA(9199..9240)
Nef Epitope Map
Author Location  
Epitope YPLTFGWCFKLVPV Epitope Alignment
YPLTFGWCFKLVPV epitope logo
Epitope Name NEF-36
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


Displaying record number 62189

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HXB2 Location Nef(155-168)
DNA(9259..9300)
Nef Epitope Map
Author Location  
Epitope EANEGENNSLLHPM Epitope Alignment
EANEGENNSLLHPM epitope logo
Epitope Name NEF-42
Species (MHC/HLA) human
Immunogen in vitro stimulation or selection, HIV-1 infection
Country Canada, United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining, Other
Keywords escape, assay or method development

Notes

References

Patel2020 Shabnum Patel, Ryo Hanajiri, Melanie Grant, Devin Saunders, Stacey Van Pelt, Michael Keller, Patrick J. Hanley, Gary Simon, Douglas F. Nixon, David Hardy, R. Brad Jones, and Catherine M. Bollard. HIV-Specific T Cells Can Be Generated against Non-Escaped T Cell Epitopes with a GMP-Compliant Manufacturing Platform. Mol. Ther. Methods Clin. Dev., 16:11-20, 13 Mar 2020. PubMed ID: 31720305. Show all entries for this paper.


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