HIV molecular immunology database
Found 13 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(77-85) p17(77-85) DNA(1018..1044) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(77-85) | |
Epitope |
SLYNTVATL
|
Epitope Alignment
|
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(93-101) p17(93-101) DNA(1066..1092) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(93-101) | |
Epitope |
EIKDTKEAL
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(146-154) p24(14-22) DNA(1225..1251) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(146-154) | |
Epitope |
AISPRTLNA
|
Epitope Alignment
|
Species (MHC/HLA) | human(E*01:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(260-267) p24(128-135) DNA(1567..1590) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(260-267) | |
Epitope |
EIYKRWII
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(306-316) p24(174-184) DNA(1705..1737) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(305-316) | |
Epitope |
AEQASQEVKNW
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*44:02) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(433-440) p2p7p1p6(70-77) DNA(2086..2109) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(433-439) | |
Epitope |
FLGKIWPS
|
Epitope Alignment
|
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(433-442) p2p7p1p6(70-79) DNA(2086..2115) |
Gag Epitope Map |
---|---|---|
Author Location | Gag(433-441) | |
Epitope |
FLGKIWPSYK
|
Epitope Alignment
|
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(358-367) RT(203-212) DNA(3156..3185) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(358-367) | |
Epitope |
EELRQHLLRW
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*44:02) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(829-836) Integrase(114-121) DNA(4569..4592) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(829-836) | |
Epitope |
HTDNGSNF
|
Epitope Alignment
|
Species (MHC/HLA) | human(C*05:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Rev(55-63) DNA(8465..8491) |
Rev Epitope Map |
---|---|---|
Author Location | Rev(55-63) | |
Epitope |
ISERILSTY
|
Epitope Alignment
|
Species (MHC/HLA) | human(A*01:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Rev(67-75) DNA(8501..8527) |
Rev Epitope Map |
---|---|---|
Author Location | Env(2-10) | |
Epitope |
SAEPVPLQL
|
Epitope Alignment
|
Species (MHC/HLA) | human(C*05:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(2-10) gp120(2-10) DNA(6228..6254) |
gp160 Epitope Map |
---|---|---|
Author Location | Env(2-10) | |
Epitope |
RVKEKYQHL
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(90-97) DNA(9064..9087) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(90-97) | |
Epitope |
FLKEKGGL
|
Epitope Alignment
|
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | peptide-HLA interaction | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | assay or method development, NK cells |
Partridge2018 Thomas Partridge, Annalisa Nicastri, Anna E. Kliszczak, Louis-Marie Yindom, Benedikt M. Kessler, Nicola Ternette, and Persephone Borrow. Discrimination Between Human Leukocyte Antigen Class I-Bound and Co-Purified HIV-Derived Peptides in Immunopeptidomics Workflows. Front. Immunol., 9:912, 2018. PubMed ID: 29780384. Show all entries for this paper.