HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 23 matching records:

Displaying record number 62834

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HXB2 Location Pol(160-167)
RT(5-12)
DNA(2562..2585)
Pol Epitope Map
Author Location RT(5-12)
Epitope IETVPVKL Epitope Alignment
IETVPVKL epitope logo
Epitope Name IL-8
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62835

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HXB2 Location Pol(173-181)
RT(18-26)
DNA(2601..2627)
Pol Epitope Map
Author Location RT(18-26)
Epitope GPKVKQWPL Epitope Alignment
GPKVKQWPL epitope logo
Epitope Name GL9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62836

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HXB2 Location Pol(188-198)
RT(33-43)
DNA(2646..2678)
Pol Epitope Map
Author Location RT(33-43)
Epitope ALVEICTEMEK Epitope Alignment
ALVEICTEMEK epitope logo
Epitope Name AK11
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62837

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HXB2 Location Pol(304-313)
RT(149-158)
DNA(2994..3023)
Pol Epitope Map
Author Location RT(149-158)
Epitope LPQGWKGSPA Epitope Alignment
LPQGWKGSPA epitope logo
Epitope Name LA10
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62838

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HXB2 Location Pol(311-319)
RT(156-164)
DNA(3015..3041)
Pol Epitope Map
Author Location RT(156-164)
Epitope SPAIFQSSM Epitope Alignment
SPAIFQSSM epitope logo
Epitope Name SM9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62839

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HXB2 Location Pol(313-321)
RT(158-166)
DNA(3021..3047)
Pol Epitope Map
Author Location RT(158-166)
Epitope AIFQSSMTK Epitope Alignment
AIFQSSMTK epitope logo
Epitope Name AK9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62840

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HXB2 Location Pol(357-365)
RT(202-210)
DNA(3153..3179)
Pol Epitope Map
Author Location RT(202-210)
Epitope IEELRQHLL Epitope Alignment
IEELRQHLL epitope logo
Epitope Name IL-9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62841

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HXB2 Location Pol(399-407)
RT(244-252)
DNA(3279..3305)
Pol Epitope Map
Author Location RT(244-252)
Epitope IVLPEKDSW Epitope Alignment
IVLPEKDSW epitope logo
Epitope Name IW9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62842

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HXB2 Location Pol(415-426)
RT(260-271)
DNA(3327..3362)
Pol Epitope Map
Author Location RT(260-271)
Epitope LVGKLNWASQIY Epitope Alignment
LVGKLNWASQIY epitope logo
Epitope Name LY12
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62843

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HXB2 Location Pol(424-432)
RT(269-277)
DNA(3354..3380)
Pol Epitope Map
Author Location RT(269-277)
Epitope QIYPGIKVR Epitope Alignment
QIYPGIKVR epitope logo
Epitope Name QR9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62844

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HXB2 Location Pol(426-434)
RT(271-279)
DNA(3360..3386)
Pol Epitope Map
Author Location RT(271-279)
Epitope YPGIKVRQL Epitope Alignment
YPGIKVRQL epitope logo
Epitope Name YL9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62845

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HXB2 Location Pol(448-456)
RT(293-301)
DNA(3426..3452)
Pol Epitope Map
Author Location RT(293-301)
Epitope IPLTEEAEL Epitope Alignment
IPLTEEAEL epitope logo
Epitope Name IL-9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62846

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HXB2 Location Pol(464-473)
RT(309-318)
DNA(3474..3503)
Pol Epitope Map
Author Location RT(309-318)
Epitope ILKEPVHGVY Epitope Alignment
ILKEPVHGVY epitope logo
Epitope Name IY10
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62847

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HXB2 Location Pol(511-521)
RT(356-366)
DNA(3615..3647)
Pol Epitope Map
Author Location RT(356-366)
Epitope RMRGAHTNDVK Epitope Alignment
RMRGAHTNDVK epitope logo
Epitope Name RK11
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62848

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HXB2 Location Pol(793-801)
Integrase(78-86)
DNA(4461..4487)
Pol Epitope Map
Author Location Integrase(78-86)
Epitope HVASGYIEA Epitope Alignment
HVASGYIEA epitope logo
Epitope Name HA9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62849

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HXB2 Location Pol(799-808)
Integrase(84-93)
DNA(4479..4508)
Pol Epitope Map
Author Location Integrase(84-93)
Epitope IEAEVIPAET Epitope Alignment
IEAEVIPAET epitope logo
Epitope Name IT10
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62850

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HXB2 Location Pol(829-836)
Integrase(114-121)
DNA(4569..4592)
Pol Epitope Map
Author Location Integrase(114-121)
Epitope HTDNGSNF Epitope Alignment
HTDNGSNF epitope logo
Epitope Name HF8
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62851

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HXB2 Location Pol(838-847)
Integrase(123-132)
DNA(4596..4625)
Pol Epitope Map
Author Location Integrase(123-132)
Epitope STTVKAACWW Epitope Alignment
STTVKAACWW epitope logo
Epitope Name SW10
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62852

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HXB2 Location Pol(850-858)
Integrase(135-143)
DNA(4632..4658)
Pol Epitope Map
Author Location Integrase(135-143)
Epitope IQQEFGIPY Epitope Alignment
IQQEFGIPY epitope logo
Epitope Name IY9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62853

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HXB2 Location Pol(912-919)
Integrase(197-204)
DNA(4818..4841)
Pol Epitope Map
Author Location Integrase(197-204)
Epitope GERIVDII Epitope Alignment
GERIVDII epitope logo
Epitope Name GI8
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62854

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HXB2 Location Pol(918-926)
Integrase(203-211)
DNA(4836..4862)
Pol Epitope Map
Author Location Integrase(203-211)
Epitope IIATDIQTK Epitope Alignment
IIATDIQTK epitope logo
Epitope Name IK9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62856

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HXB2 Location Pol(975-983)
Integrase(260-268)
DNA(5007..5033)
Pol Epitope Map
Author Location Integrase(260-268)
Epitope VPRRKAKII Epitope Alignment
VPRRKAKII epitope logo
Epitope Name VI9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


Displaying record number 62855

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HXB2 Location Pol(978-986)
Integrase(263-271)
DNA(5016..5042)
Pol Epitope Map
Author Location Integrase(263-271)
Epitope RKAKIIRDY Epitope Alignment
RKAKIIRDY epitope logo
Epitope Name RY9
Subtype B, C
Species (MHC/HLA) human
Immunogen HIV-1 infection, engineered
Experimental methods Other, Relative replication capacity assay
Keywords acute/early infection, HLA associated polymorphism, chronic infection, protective allele

Notes

References

Ojwach2018 Doty B. A. Ojwach, Daniel MacMillan, Tarylee Reddy, Vladimir Novitsky, Zabrina L. Brumme, Mark A. Brockman, Thumbi Ndung'u, and Jaclyn K. Mann. Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection. J. Virol., 92(19), 1 Oct 2018. PubMed ID: 29997209. Show all entries for this paper.


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