HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 25 matching records:

Displaying record number 61970

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HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location Gag(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61961

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HXB2 Location Gag(53-61)
p17(53-61)
DNA(946..972)
Gag Epitope Map
Author Location Gag(53-61)
Epitope TTEGCQQIM Epitope Alignment
TTEGCQQIM epitope logo
Subtype A, D
Species (MHC/HLA) human(A*01:01)
Immunogen HIV-1 infection
Patient MHC/HLA 2137: A*01:01, A*23:01, B*44:15, B*58:02, C*03:02, C*04:07; 1932: A*01:01, B*37:01, B*81:01, C*06:02, C*18:01; 2204: A*01:01, A*68:02, B*42:01, B*49:01, C*07:01, C*17:01
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61945

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HXB2 Location Gag(124-132)
p17(124-132)
DNA(1159..1185)
Gag Epitope Map
Author Location Gag(124-132)
Epitope NSSKVSQNY Epitope Alignment
NSSKVSQNY epitope logo
Show epitope variants
Subtype A, D
Species (MHC/HLA) human(A*01:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1932: A*01:01, B*37:01, B*81:01, C*06:02, C*18:01; 2297: A*01:01, A*30:01, B*08:01, B*57:03, C*07:04, C*18:01; ML2261: A*01:01, A*03:01, B*27:26, B*49:01, C*02:02, C*07:01; 2178: A*01:01, A*29:02, B*81:01, C*07:04, C*08:04; 1589: A*01:01, A*30:02, B*58:02, C*06:02, C*06:06; 2646: A*01:01, A*29:02, B*45:01, B*57:01, C*06:02, C*07:01; 893: A*01:01, A*24:02, B*15:17, B*35:02, C*04:01, C*17:01
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61981

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HXB2 Location Gag(134-142)
p24(2-10)
DNA(1189..1215)
Gag Epitope Map
Author Location Gag(134-142)
Epitope IVQNAQGQM Epitope Alignment
IVQNAQGQM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61972

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HXB2 Location Gag(148-156)
p24(16-24)
DNA(1231..1257)
Gag Epitope Map
Author Location Gag(148-156)
Epitope SPRTLNAWV Epitope Alignment
SPRTLNAWV epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2230: A*01:01, A*03:01, B*07:02, B*58:02, C*06:06, C*07:02; 2044: A*03:08, A*29:01, B*07:02, B*08:01, C*07:02
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61973

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HXB2 Location Gag(180-188)
p24(48-56)
DNA(1327..1353)
Gag Epitope Map
Author Location Gag(180-188)
Epitope TPQDLNMML Epitope Alignment
TPQDLNMML epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2257: A*23:01, A*30:02, B*07:02, B*18:01, C*07:02, C*15:05
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61979

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HXB2 Location Gag(190-198)
p24(58-66)
DNA(1357..1383)
Gag Epitope Map
Author Location Gag(190-198)
Epitope IVGGHQAAM Epitope Alignment
IVGGHQAAM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61968

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HXB2 Location Gag(221-229)
p24(89-97)
DNA(1450..1476)
Gag Epitope Map
Author Location Gag(221-229)
Epitope GPIPPGQMR Epitope Alignment
GPIPPGQMR epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23; 2257: A*23:01, A*30:02, B*07:02, B*18:01, C*07:02, C*15:05
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61974

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HXB2 Location Gag(242-250)
p24(110-118)
DNA(1513..1539)
Gag Epitope Map
Author Location Gag(242-250)
Epitope TPQEQIGWM Epitope Alignment
TPQEQIGWM epitope logo
Show epitope variants
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61975

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HXB2 Location Gag(274-282)
p24(142-150)
DNA(1609..1635)
Gag Epitope Map
Author Location Gag(274-282)
Epitope VRMYSPVSI Epitope Alignment
VRMYSPVSI epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61962

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HXB2 Location Gag(296-304)
p24(164-172)
DNA(1675..1701)
Gag Epitope Map
Author Location Gag(296-304)
Epitope YVDRFFKTL Epitope Alignment
YVDRFFKTL epitope logo
Subtype A, D
Species (MHC/HLA) human(A*01:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1932: A*01:01, B*37:01, B*81:01, C*06:02, C*18:01; 2003: A*01:01, A*68:02, B*15:10, B*81:01, C*03:04, C*18:01
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61976

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HXB2 Location Gag(296-304)
p24(164-172)
DNA(1675..1701)
Gag Epitope Map
Author Location Gag(296-304)
Epitope YVDRFFKTL Epitope Alignment
YVDRFFKTL epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23; 2181: A*30:01, A*31:01, B*07:02, B*53:01, C*03:04, C*07:14
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61969

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HXB2 Location Gag(335-343)
p24(203-211)
DNA(1792..1818)
Gag Epitope Map
Author Location Gag(335-343)
Epitope RALGPGATL Epitope Alignment
RALGPGATL epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23; 2257: A*23:01, A*30:02, B*07:02, B*18:01, C*07:02, C*15:05; 1961: A*03:01, A*23:01, B*07:02, B*42:01, C*04:01, C*17:01
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61966

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HXB2 Location Gag(338-346)
p24(206-214)
DNA(1801..1827)
Gag Epitope Map
Author Location Gag(338-346)
Epitope GPGATLEEM Epitope Alignment
GPGATLEEM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61967

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HXB2 Location Gag(355-363)
p24(223-231)
DNA(1852..1878)
Gag Epitope Map
Author Location Gag(355-363)
Epitope GPGHKARVL Epitope Alignment
GPGHKARVL epitope logo
Show epitope variants
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 1394: A*02:01, A*68:02, B*07:02, B*13:02, C*04:01, C*06:02; 2545: A*30:02, A*68:02, B*07:02, B*18:01, C*07:02, C*07:04; 2044: A*03:08, A*29:01, B*07:02, B*08:01, C*07:02; 2035: A*23:01, A*30:01, B*07:02, B*15:10, C*03:04, C*07:14; 2320: A*02:01, A*33:01, B*07:02, B*49:01, C*07:01, C*07:02; 2644: A*36:01, A*68:02, B*07:02, B*53:01, C*06:02, C*17:01; 2423: A*68:02, B*07:02, C*07:02; 2400: A*02:01, A*68:02, B*07:02, B*42:01, C*08:02, C*17:01; 2427: A*29:02, A*68:02, B*07:02, B*39:10, C*07:27, C*12:03
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61980

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HXB2 Location Gag(359-367)
p24(227)-p2p7p1p6(4)
DNA(1864..1890)
Gag Epitope Map
Author Location Gag(3597-367)
Epitope KARVLAEAM Epitope Alignment
KARVLAEAM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2545: A*30:02, A*68:02, B*07:02, B*18:01, C*07:02, C*07:04; 2320: A*02:01, A*33:01, B*07:02, B*49:01, C*07:01, C*07:02; 2644: A*36:01, A*68:02, B*07:02, B*53:01, C*06:02, C*17:01; 2423: A*68:02, B*07:02, C*07:02; 2400: A*02:01, A*68:02, B*07:02, B*42:01, C*08:02, C*17:01
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61982

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HXB2 Location Gag(369-377)
p2p7p1p6(6-14)
DNA(1894..1920)
Gag Epitope Map
Author Location Gag(369-377)
Epitope QVQHTNIMM Epitope Alignment
QVQHTNIMM epitope logo
Show epitope variants
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2545: A*30:02, A*68:02, B*07:02, B*18:01, C*07:02, C*07:04; 2320: A*02:01, A*33:01, B*07:02, B*49:01, C*07:01, C*07:02; 2644: A*36:01, A*68:02, B*07:02, B*53:01, C*06:02, C*17:01; 2423: A*68:02, B*07:02, C*07:02; 2400: A*02:01, A*68:02, B*07:02, B*42:01, C*08:02, C*17:01; 2427: A*29:02, A*68:02, B*07:02, B*39:10, C*07:27, C*12:03; 2425: A*29:02, A*68:02, B*07:02, B*39:10, C*07:02, C*12:03
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61984

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HXB2 Location Gag(370-378)
p2p7p1p6(7-15)
DNA(1897..1923)
Gag Epitope Map
Author Location Gag(370-378)
Epitope ATNANAAIM Epitope Alignment
ATNANAAIM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2545: A*30:02, A*68:02, B*07:02, B*18:01, C*07:02, C*07:04; 2320: A*02:01, A*33:01, B*07:02, B*49:01, C*07:01, C*07:02; 2644: A*36:01, A*68:02, B*07:02, B*53:01, C*06:02, C*17:01; 2423: A*68:02, B*07:02, C*07:02; 2400: A*02:01, A*68:02, B*07:02, B*42:01, C*08:02, C*17:01; 2427: A*29:02, A*68:02, B*07:02, B*39:10, C*07:27, C*12:03
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61983

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HXB2 Location Gag(375-383)
p2p7p1p6(12-20)
DNA(1912..1938)
Gag Epitope Map
Author Location Gag(375-383)
Epitope NIMMQRGNF Epitope Alignment
NIMMQRGNF epitope logo
Show epitope variants
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2545: A*30:02, A*68:02, B*07:02, B*18:01, C*07:02, C*07:04; 2320: A*02:01, A*33:01, B*07:02, B*49:01, C*07:01, C*07:02; 2644: A*36:01, A*68:02, B*07:02, B*53:01, C*06:02, C*17:01; 2423: A*68:02, B*07:02, C*07:02; 2400: A*02:01, A*68:02, B*07:02, B*42:01, C*08:02, C*17:01; 2427: A*29:02, A*68:02, B*07:02, B*39:10, C*07:27, C*12:03
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61964

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HXB2 Location Gag(407-415)
p2p7p1p6(44-52)
DNA(2008..2034)
Gag Epitope Map
Author Location Gag(406-414)
Epitope APRKKGCWK Epitope Alignment
APRKKGCWK epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2230: A*01:01, A*03:01, B*07:02, B*58:02, C*06:06, C*07:02; 1394: A*02:01, A*68:02, B*07:02, B*13:02, C*04:01, C*06:02
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61978

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HXB2 Location Gag(438-446)
p2p7p1p6(75-83)
DNA(2101..2127)
Gag Epitope Map
Author Location Gag(437-445)
Epitope WPSSKGRPG Epitope Alignment
WPSSKGRPG epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2035: A*23:01, A*30:01, B*07:02, B*15:10, C*03:04, C*07:14
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61971

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HXB2 Location Gag(444-452)
p2p7p1p6(81-89)
DNA(2119..2145)
Gag Epitope Map
Author Location Gag(443-451)
Epitope RPGNFPQSR Epitope Alignment
RPGNFPQSR epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2257: A*23:01, A*30:02, B*07:02, B*18:01, C*07:02, C*15:05
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61965

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HXB2 Location Gag(448-456)
p2p7p1p6(85-93)
DNA(2131..2157)
Gag Epitope Map
Author Location Gag(447-455)
Epitope FPQSRPEPT Epitope Alignment
FPQSRPEPT epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61963

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HXB2 Location Gag(457-465)
p2p7p1p6(94-102)
DNA(2158..2184)
Gag Epitope Map
Author Location Gag(456-464)
Epitope APPAEIFGM Epitope Alignment
APPAEIFGM epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2181: A*30:01, A*31:01, B*07:02, B*53:01, C*03:04, C*07:14
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


Displaying record number 61977

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HXB2 Location Gag(484-492)
p2p7p1p6(121-129)
DNA(2239..2265)
Gag Epitope Map
Author Location Gag(483-491)
Epitope YPLVSLKSL Epitope Alignment
YPLVSLKSL epitope logo
Subtype A, D
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 2127: A*01:01, A*03:01, B*07:02, B*41:01, C*07:01, C*07:23; 2181: A*30:01, A*31:01, B*07:02, B*53:01, C*03:04, C*07:14
Country Kenya
Experimental methods CD8 T-cell Elispot - IFNγ, Other, Tetramer binding
Keywords subtype comparisons, HIV exposed persistently seronegative (HEPS), assay or method development, novel epitope

Notes

References

Luo2012 Ma Luo, Christina A. Daniuk, Tamsir O. Diallo, Rupert E. Capina, Joshua Kimani, Charles Wachihi, Makubo Kimani, Thomas Bielawny, Trevor Peterson, Mark G. R. Mendoza, Sandra Kiazyk, T. Blake Ball, and Francis A. Plummer. For Protection from HIV-1 Infection, More Might Not Be Better: A Systematic Analysis of HIV Gag Epitopes of Two Alleles Associated with Different Outcomes of HIV-1 Infection. J. Virol., 86(2):1166-1180, Jan 2012. PubMed ID: 22072744. Show all entries for this paper.


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