HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 6 matching records:

Displaying record number 58960

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HXB2 Location Gag(156-173)
p24(24-41)
DNA(1255..1308)
Gag Epitope Map
Author Location Gag(156-173)
Epitope VKVIEEKAFSPEVIPMFT Epitope Alignment
VKVIEEKAFSPEVIPMFT epitope logo
Epitope Name Gag 156-173
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, immunodominance, escape, acute/early infection

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


Displaying record number 59054

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HXB2 Location Tat(9-26)
DNA(5855..5908)
Tat Epitope Map
Author Location Tat(9-26)
Epitope DPWNHPGSQPKTACNNCY Epitope Alignment
DPWNHPGSQPKTACNNCY epitope logo
Epitope Name Tat 9-26
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


Displaying record number 59055

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HXB2 Location Tat(38-47)
DNA(5942..5971)
Tat Epitope Map
Author Location Tat(38-47)
Epitope FQKKGLGISY Epitope Alignment
FQKKGLGISY epitope logo
Show epitope variants
Epitope Name Tat 38-47
Subtype C
Species (MHC/HLA) human(B*15:03)
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, immunodominance, escape, acute/early infection, optimal epitope

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


Displaying record number 59057

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HXB2 Location gp160(34-51)
gp120(34-51)
DNA(6324..6377)
gp160 Epitope Map
Author Location Env(34-51)
Epitope LWVTVYYGVPVWKEAKTT Epitope Alignment
LWVTVYYGVPVWKEAKTT epitope logo
Epitope Name Env 34-51
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, immunodominance, acute/early infection

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


Displaying record number 59056

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HXB2 Location gp160(709-726)
gp41(198-215)
DNA(8349..8402)
gp160 Epitope Map
Author Location Env(709-726)
Epitope RQGYSPLSFQTLIPNPRG Epitope Alignment
RQGYSPLSFQTLIPNPRG epitope logo
Epitope Name Env 709-726
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, immunodominance, escape, acute/early infection

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


Displaying record number 59058

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HXB2 Location Nef(64-74)
DNA(8986..9018)
Nef Epitope Map
Author Location Nef(64-74)
Epitope EEVGFPVKPQV Epitope Alignment
EEVGFPVKPQV epitope logo
Show epitope variants
Epitope Name Nef 64-74
Subtype C
Species (MHC/HLA) human(B*45:01)
Immunogen HIV-1 infection
Patient MHC/HLA CH131: A*23:01, A*29:01, B*15:03, B*45:01, C*02:02, C*06:02
Country Malawi
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, immunodominance, escape, acute/early infection, optimal epitope

Notes

References

Liu2013a Michael K. P. Liu, Natalie Hawkins, Adam J. Ritchie, Vitaly V. Ganusov, Victoria Whale, Simon Brackenridge, Hui Li, Jeffrey W. Pavlicek, Fangping Cai, Melissa Rose-Abrahams, Florette Treurnicht, Peter Hraber, Catherine Riou, Clive Gray, Guido Ferrari, Rachel Tanner, Li-Hua Ping, Jeffrey A. Anderson, Ronald Swanstrom, CHAVI Core B, Myron Cohen, Salim S. Abdool Karim, Barton Haynes, Persephone Borrow, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Carolyn Williamson, Bette T. Korber, Feng Gao, Steve Self, Andrew McMichael, and Nilu Goonetilleke. Vertical T Cell Immunodominance and Epitope Entropy Determine HIV-1 Escape. J. Clin. Invest., 123(1):380-393, 2 Jan 2013. PubMed ID: 23221345. Show all entries for this paper.


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