HIV molecular immunology database
Found 12 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(20-29) p17(20-29) DNA(847..876) |
Gag Epitope Map |
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Author Location | Gag(20-29) | |
Epitope |
RLRPGGKKKY
|
Epitope Alignment
|
Epitope Name | RY10 | |
Species (MHC/HLA) | human(A*03:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
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HXB2 Location | Gag(77-85) p17(77-85) DNA(1018..1044) |
Gag Epitope Map |
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Author Location | Gag(77-85) | |
Epitope |
SLYNTVATL
|
Epitope Alignment
|
Epitope Name | SL9 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
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HXB2 Location | Gag(162-172) p24(30-40) DNA(1273..1305) |
Gag Epitope Map |
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Author Location | Gag | |
Epitope |
KAFSPEVIPMF
|
Epitope Alignment
|
Epitope Name | KF11 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(180-188) p24(48-56) DNA(1327..1353) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
TPQDLNTML
|
Epitope Alignment
|
Epitope Name | TL9 | |
Subtype | C | |
Species (MHC/HLA) | human(B*42, B*81) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(180-188) p24(48-56) DNA(1327..1353) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
TPQDLNMML
|
Epitope Alignment
|
Epitope Name | TL9 | |
Subtype | A | |
Species (MHC/HLA) | human(B*42, B*81) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(254-262) p24(122-130) DNA(1549..1575) |
Gag Epitope Map |
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Author Location | Gag(254-262) | |
Epitope |
NPVPVGNIY
|
Epitope Alignment
|
Epitope Name | NY9 | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-2 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(263-272) p24(131-140) DNA(1576..1605) |
Gag Epitope Map |
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Author Location | Gag(263-272) | |
Epitope |
KRWIILGLNK
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | KK10 | |
Species (MHC/HLA) | human(B*27:05) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(283-290) RT(128-135) DNA(2931..2954) |
Pol Epitope Map |
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Author Location | Pol | |
Epitope |
TAFTIPSI
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | TI8 | |
Species (MHC/HLA) | human(B*51:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(73-82) DNA(9013..9042) |
Nef Epitope Map |
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Author Location | Nef(263-272) | |
Epitope |
QVPLRPMTYK
|
Epitope Alignment
|
Epitope Name | QK10 | |
Species (MHC/HLA) | human(A*03:01) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(90-97) DNA(9064..9087) |
Nef Epitope Map |
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Author Location | Nef | |
Epitope |
FLKEKGGL
|
Epitope Alignment
|
Epitope Name | FL8 | |
Species (MHC/HLA) | human(B*08) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(134-141) DNA(9196..9219) |
Nef Epitope Map |
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Author Location | Nef | |
Epitope |
RYPLTFGW
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | RW8 | |
Species (MHC/HLA) | human(A*24:02) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(134-143) DNA(9196..9225) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
RYPLTFGWCF
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | RF10 | |
Species (MHC/HLA) | human(A*24:02) | |
Immunogen | HIV-1 infection | |
Experimental methods | Other | |
Keywords | review, immunodominance, TCR usage, variant cross-reactivity |
Lissina2016 Anna Lissina, Lisa A. Chakrabarti, Masafumi Takiguchi, and Victor Appay. TCR Clonotypes: Molecular Determinants of T-Cell Efficacy against HIV. Curr. Opin. Virol., 16:77-85, Feb 2016. PubMed ID: 26874617. Show all entries for this paper.