HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 15 matching records:

Displaying record number 58435

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HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location Gag(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Subtype A1
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML0415: A*30:02, A*34:02, B*13:02, B*53:01, C*04:01, C*08:04
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58436

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HXB2 Location Gag(20-29)
p17(20-29)
DNA(847..876)
Gag Epitope Map
Author Location Gag(20-29)
Epitope RLRPGGKKKY Epitope Alignment
RLRPGGKKKY epitope logo
Subtype A1
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML0415: A*30:02, A*34:02, B*13:02, B*53:01, C*04:01, C*08:04
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58437

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HXB2 Location Gag(24-32)
p17(24-32)
DNA(859..885)
Gag Epitope Map
Author Location Gag(24-32)
Epitope GGKKKYKLK Epitope Alignment
GGKKKYKLK epitope logo
Subtype A1
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1594: A*01:01, A*30:01, B*08:01, B*42:01, C*07:04, C*17:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58433

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HXB2 Location Gag(28-36)
p17(28-36)
DNA(871..897)
Gag Epitope Map
Author Location Gag(28-36)
Epitope KYKLKHIVW Epitope Alignment
KYKLKHIVW epitope logo
Subtype A1
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA ML1876: A*02:02, A*24:02, B*15:03, B*18:01, C*07:01; ML1660: A*24:02, A*66:01, B*18:01, B*58:01, C*07:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58430

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HXB2 Location Gag(74-82)
p17(74-82)
DNA(1009..1035)
Gag Epitope Map
Author Location Gag(74-82)
Epitope ELRSLYNTV Epitope Alignment
ELRSLYNTV epitope logo
Subtype A1
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1992: A*02:01, A*30:01, B*08:01, B*44:15, C*02:02, C*04:01.; ML1594: A*01:01, A*30:01, B*08:01, B*42:01, C*07:04, C*17:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58431

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HXB2 Location Gag(76-86)
p17(76-86)
DNA(1015..1047)
Gag Epitope Map
Author Location Gag(76-86)
Epitope RSLYNTVATLY Epitope Alignment
RSLYNTVATLY epitope logo
Subtype A1
Species (MHC/HLA) human(A*30:02)
Immunogen HIV-1 infection
Patient MHC/HLA ML1992: A*02:01, A*30:01, B*08:01, B*44:15, C*02:02, C*04:01.
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58427

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HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location Gag(77-85)
Epitope SLYNTVATL Epitope Alignment
SLYNTVATL epitope logo
Subtype A1, C
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1992: A*02:01, A*30:01, B*08:01, B*44:15, C*02:02, C*04:01.; ML1857: A*02:01, A*66:01, B*35:01, B*44:18, C*04:01, C*16:04; ML1876: A*02:02, A*24:02, B*15:03, B*18:01, C*07:01; ML0795: A*02:02, A*02:04, B*58:02, B*73:01, C*06:02, C*15:05:01; ML1208: A*02:01, B*15:03, B*49:01, C*04:07, C*17:01; ML1591: A*02:01, A*24:02, B*35:02, B*51:01, C*04:01, C*16:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58285

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HXB2 Location Gag(162-169)
p24(30-37)
DNA(1273..1296)
Gag Epitope Map
Author Location Gag(162-169)
Epitope KAFSPEVI Epitope Alignment
KAFSPEVI epitope logo
Subtype A1
Species (MHC/HLA) human(B*57:03)
Immunogen HIV-1 infection
Patient MHC/HLA ML1111: A*30:01, A*36:01, B*42:01, B*57:03, C*17:01, C*18:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58423

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HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location Gag(162-172)
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Subtype A1
Species (MHC/HLA) human(B*57:03)
Immunogen HIV-1 infection
Patient MHC/HLA ML1111: A*30:01, A*36:01, B*42:01, B*57:03, C*17:01, C*18:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58425

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HXB2 Location Gag(180-188)
p24(48-56)
DNA(1327..1353)
Gag Epitope Map
Author Location Gag(180-188)
Epitope TPQDLNTNL Epitope Alignment
TPQDLNTNL epitope logo
Subtype A1
Species (MHC/HLA) human(B*42:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1111: A*30:01, A*36:01, B*42:01, B*57:03, C*17:01, C*18:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58426

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HXB2 Location Gag(180-188)
p24(48-56)
DNA(1327..1353)
Gag Epitope Map
Author Location Gag(180-188)
Epitope TPQDLNTML Epitope Alignment
TPQDLNTML epitope logo
Subtype A1
Species (MHC/HLA) human(C*08:02)
Immunogen HIV-1 infection
Patient MHC/HLA ML0157: A*03:01, B*14:06, B*49:01, C*07:01, C*08:02
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58428

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HXB2 Location Gag(254-262)
p24(122-130)
DNA(1549..1575)
Gag Epitope Map
Author Location Gag(254-262)
Epitope PPIPVGDIY Epitope Alignment
PPIPVGDIY epitope logo
Subtype C
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1857: A*02:01, A*66:01, B*35:01, B*44:18, C*04:01, C*16:04
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58434

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HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location Gag(308-316)
Epitope QASQEVKNW Epitope Alignment
QASQEVKNW epitope logo
Subtype A1
Species (MHC/HLA) human(B*53:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1003: A*30:02, A*66:01, B*53:01, B*58:02, C*04:01, C*06:02
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58432

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HXB2 Location Gag(329-337)
p24(197-205)
DNA(1774..1800)
Gag Epitope Map
Author Location Gag(329-337)
Epitope DCKTILKAL Epitope Alignment
DCKTILKAL epitope logo
Subtype A1
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1992: A*02:01, A*30:01, B*08:01, B*44:15, C*02:02, C*04:01.; ML1857: A*02:01, A*66:01, B*35:01, B*44:18, C*04:01, C*16:04
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


Displaying record number 58429

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HXB2 Location Gag(433-442)
p2p7p1p6(70-79)
DNA(2086..2115)
Gag Epitope Map
Author Location Gag(433-442)
Epitope FLGKIWPSYK Epitope Alignment
FLGKIWPSYK epitope logo
Subtype A1, C, D
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA ML1992: A*02:01, A*30:01, B*08:01, B*44:15, C*02:02, C*04:01.; ML1857: A*02:01, A*66:01, B*35:01, B*44:18, C*04:01, C*16:04; ML1102: A*01:01, A*02:01, B*07:02, B*44:03, C*04:01, C*06:02; ML1317: A*68:02, A*74:01, B*35:03, B*58:01, C*04:01, C*07:01; ML1591: A*02:01, A*24:02, B*35:02, B*51:01, C*04:01, C*16:01
Country Kenya
Experimental methods Other
Keywords assay or method development

Notes

References

Liang2011 Binhua Liang, Ma Luo, Joel Scott-Herridge, Christina Semeniuk, Mark Mendoza, Rupert Capina, Brent Sheardown, Hezhao Ji, Joshua Kimani, Blake T. Ball, Gary Van Domselaar, Morag Graham, Shane Tyler, Steven J. M. Jones, and Francis A. Plummer. A Comparison of Parallel Pyrosequencing and Sanger Clone-Based Sequencing and Its Impact on the Characterization of the Genetic Diversity of HIV-1. PLoS One, 6(10):e26745, 2011. PubMed ID: 22039546. Show all entries for this paper.


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