HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 125 matching records:

Displaying record number 60944

HXB2 Location Gag(11-19)
p17(11-19)
DNA(820..846)
Gag Epitope Map
Author Location p17(11-19)
Epitope GELDRWEKI Epitope Alignment
GELDRWEKI epitope logo
Subtype B
Species (MHC/HLA) human(B*4901)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61001

HXB2 Location Gag(15-23)
p17(15-23)
DNA(832..858)
Gag Epitope Map
Author Location p17(15-23)
Epitope RWEKIRLRP Epitope Alignment
RWEKIRLRP epitope logo
Subtype B
Species (MHC/HLA) human(A*0205)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60958

HXB2 Location Gag(19-27)
p17(19-27)
DNA(844..870)
Gag Epitope Map
Author Location p17(19-27)
Epitope IRLRPGGKK Epitope Alignment
IRLRPGGKK epitope logo
Subtype B
Species (MHC/HLA) human(B*2705)
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60994

HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location p17(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Subtype B
Species (MHC/HLA) human(A*0301)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60967

HXB2 Location Gag(28-36)
p17(28-36)
DNA(871..897)
Gag Epitope Map
Author Location p17(28-36)
Epitope KYKLKHIVW Epitope Alignment
KYKLKHIVW epitope logo
Subtype B
Species (MHC/HLA) human(A*2402)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60951

HXB2 Location Gag(71-79)
p17(71-79)
DNA(1000..1026)
Gag Epitope Map
Author Location p17(71-79)
Epitope GTEELRSLY Epitope Alignment
GTEELRSLY epitope logo
Subtype B
Species (MHC/HLA) human(A*0101)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702; 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60950

HXB2 Location Gag(71-79)
p17(71-79)
DNA(1000..1026)
Gag Epitope Map
Author Location p17(71-79)
Epitope GSEELRSLY Epitope Alignment
GSEELRSLY epitope logo
Subtype B
Species (MHC/HLA) human(A*0101, B*57)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60935

HXB2 Location Gag(74-82)
p17(74-82)
DNA(1009..1035)
Gag Epitope Map
Author Location p17(74-82)
Epitope ELRSLYNTV Epitope Alignment
ELRSLYNTV epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61007

HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location p17(77-85)
Epitope SLYNTVATL Epitope Alignment
SLYNTVATL epitope logo
Subtype B
Species (MHC/HLA) human(A*0202)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*0101, A*0202, B*0701, B*1503, Cw*0210, Cw*0702; 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602; 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61016

HXB2 Location Gag(81-89)
p17(81-89)
DNA(1030..1056)
Gag Epitope Map
Author Location p17(81-89)
Epitope TVATLYCVH Epitope Alignment
TVATLYCVH epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60916

HXB2 Location Gag(83-91)
p17(83-91)
DNA(1036..1062)
Gag Epitope Map
Author Location p17(83-91)
Epitope ATLYCVHQR Epitope Alignment
ATLYCVHQR epitope logo
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60919

HXB2 Location Gag(87-95)
p17(87-95)
DNA(1048..1074)
Gag Epitope Map
Author Location p17(87-95)
Epitope CVHQRIEVK Epitope Alignment
CVHQRIEVK epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60920

HXB2 Location Gag(87-95)
p17(87-95)
DNA(1048..1074)
Gag Epitope Map
Author Location p17(87-95)
Epitope CVHQRIEVK Epitope Alignment
CVHQRIEVK epitope logo
Subtype B
Species (MHC/HLA) human(A*0301)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60955

HXB2 Location Gag(92-101)
p17(92-101)
DNA(1063..1092)
Gag Epitope Map
Author Location p17(92-101)
Epitope IEIKDTKEAL Epitope Alignment
IEIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B*4001)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60922

HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope DIKDTKEAL Epitope Alignment
DIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60695

HXB2 Location Gag(119-128)
p17(119-128)
DNA(1144..1173)
Gag Epitope Map
Author Location p17(119-128)
Epitope AADTGNSSQV Epitope Alignment
AADTGNSSQV epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60948

HXB2 Location Gag(140-149)
p24(8-17)
DNA(1207..1236)
Gag Epitope Map
Author Location p24(8-17)
Epitope GQMVHQAISP Epitope Alignment
GQMVHQAISP epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60978

HXB2 Location Gag(145-155)
p24(13-23)
DNA(1222..1254)
Gag Epitope Map
Author Location p24(13-23)
Epitope QAISPRTLNAW Epitope Alignment
QAISPRTLNAW epitope logo
Subtype B
Species (MHC/HLA) human(A*2501)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60959

HXB2 Location Gag(147-155)
p24(15-23)
DNA(1228..1254)
Gag Epitope Map
Author Location p24(15-23)
Epitope ISPRTLNAW Epitope Alignment
ISPRTLNAW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602; 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58963

HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location p24(30-40)
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Epitope Name KF11
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602; 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210; 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60938

HXB2 Location Gag(203-212)
p24(71-80)
DNA(1396..1425)
Gag Epitope Map
Author Location p24(71-80)
Epitope ETINEEAAEW Epitope Alignment
ETINEEAAEW epitope logo
Subtype B
Species (MHC/HLA) human(A*2501)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60952

HXB2 Location Gag(216-223)
p24(84-91)
DNA(1435..1458)
Gag Epitope Map
Author Location p24(84-91)
Epitope HPVHAGPI Epitope Alignment
HPVHAGPI epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61014

HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24(108-117)
Epitope TSTLQEQIAW Epitope Alignment
TSTLQEQIAW epitope logo
Subtype B
Species (MHC/HLA) human(B*57, B*5703)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210; 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61015

HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24(108-117)
Epitope TSTLQEQIGW Epitope Alignment
TSTLQEQIGW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602; 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60973

HXB2 Location Gag(250-258)
p24(118-126)
DNA(1537..1563)
Gag Epitope Map
Author Location p24(118-126)
Epitope MTSNPPIPV Epitope Alignment
MTSNPPIPV epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60977

HXB2 Location Gag(254-262)
p24(122-130)
DNA(1549..1575)
Gag Epitope Map
Author Location p24(122-130)
Epitope PPIPVGDIY Epitope Alignment
PPIPVGDIY epitope logo
Subtype B
Species (MHC/HLA) human(B*3501)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60932

HXB2 Location Gag(260-267)
p24(128-135)
DNA(1567..1590)
Gag Epitope Map
Author Location p24(128-135)
Epitope EIYKRWII Epitope Alignment
EIYKRWII epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 75688: A*0201, A*3201, B*0801, B*5501, Cw*0303, Cw*0701; 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702; 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60933

HXB2 Location Gag(260-268)
p24(128-136)
DNA(1567..1593)
Gag Epitope Map
Author Location p24(128-136)
Epitope EIYKRWIIL Epitope Alignment
EIYKRWIIL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58961

HXB2 Location Gag(263-272)
p24(131-140)
DNA(1576..1605)
Gag Epitope Map
Author Location p24(131-140)
Epitope KRWIILGLNK Epitope Alignment
KRWIILGLNK epitope logo
Epitope Name KK10
Subtype B
Species (MHC/HLA) human(B*2705)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701; 20786: A*0201, A*1101, B*2705, B*4002, Cw*0202, Cw*0202; 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61028

HXB2 Location Gag(277-285)
p24(145-153)
DNA(1618..1644)
Gag Epitope Map
Author Location p24(145-153)
Epitope YSPVSILDI Epitope Alignment
YSPVSILDI epitope logo
Subtype B
Species (MHC/HLA) human(Cw*0102)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60927

HXB2 Location Gag(298-308)
p24(166-176)
DNA(1681..1713)
Gag Epitope Map
Author Location p24(166-176)
Epitope DRFYKTLRAEQ Epitope Alignment
DRFYKTLRAEQ epitope logo
Subtype B
Species (MHC/HLA) human(B*1402)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60912

HXB2 Location Gag(306-316)
p24(174-184)
DNA(1705..1737)
Gag Epitope Map
Author Location p24(174-184)
Epitope AEQASQDVKNW Epitope Alignment
AEQASQDVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*4402)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60979

HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location p24(176-184)
Epitope QASQDVKNW Epitope Alignment
QASQDVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*5301)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60980

HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location p24(176-184)
Epitope QASQEVKNW Epitope Alignment
QASQEVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60975

HXB2 Location Gag(327-334)
p24(195-202)
DNA(1768..1791)
Gag Epitope Map
Author Location p24(195-202)
Epitope NPDCKTIL Epitope Alignment
NPDCKTIL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801, B*3503, B35)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701; 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401; 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60947

HXB2 Location Gag(355-363)
p24(223-231)
DNA(1852..1878)
Gag Epitope Map
Author Location p24(223-231)
Epitope GPSHKARVL Epitope Alignment
GPSHKARVL epitope logo
Subtype B
Species (MHC/HLA) human(B*0702)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60988

HXB2 Location Gag(369-377)
p2p7p1p6(6-14)
DNA(1894..1920)
Gag Epitope Map
Author Location p2p7p1p6(6-14)
Epitope QVTNSATIM Epitope Alignment
QVTNSATIM epitope logo
Subtype B
Species (MHC/HLA) human(B*3503)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61012

HXB2 Location Gag(427-434)
p2p7p1p6(64-71)
DNA(2068..2091)
Gag Epitope Map
Author Location p2p7p1p6(64-71)
Epitope TERQANFL Epitope Alignment
TERQANFL epitope logo
Subtype B
Species (MHC/HLA) human(B*4002)
Immunogen HIV-1 infection
Patient MHC/HLA 20786: A*0201, A*1101, B*2705, B*4002, Cw*0202, Cw*0202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60940

HXB2 Location Gag(433-440)
p2p7p1p6(70-77)
DNA(2086..2109)
Gag Epitope Map
Author Location p2p7p1p6(70-77)
Epitope FLGKIWPS Epitope Alignment
FLGKIWPS epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704; 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60965

HXB2 Location Gag(481-489)
p2p7p1p6(118-126)
DNA(2230..2256)
Gag Epitope Map
Author Location p6(33-41)
Epitope KELYPLASL Epitope Alignment
KELYPLASL epitope logo
Subtype B
Species (MHC/HLA) human(B*40)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501; 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60936

HXB2 Location Gag(482-490)
p2p7p1p6(119-127)
DNA(2233..2259)
Gag Epitope Map
Author Location p2p7p1p6(119-127)
Epitope ELYPLASLR Epitope Alignment
ELYPLASLR epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60915

HXB2 Location Pol(23-31)
Gag/Pol-TF(23-31)
DNA(2151..2177)
Pol Epitope Map
Author Location Pol(23-31)
Epitope ANSPTSREL Epitope Alignment
ANSPTSREL epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60929

HXB2 Location Pol(90-98)
Protease(34-42)
DNA(2352..2378)
Pol Epitope Map
Author Location Protease(34-42)
Epitope EEMNLPGRW Epitope Alignment
EEMNLPGRW epitope logo
Subtype B
Species (MHC/HLA) human(B*4403)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601; 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60970

HXB2 Location Pol(132-140)
Protease(76-84)
DNA(2478..2504)
Pol Epitope Map
Author Location Protease(76-84)
Epitope LVGPTPVNI Epitope Alignment
LVGPTPVNI epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60946

HXB2 Location Pol(173-181)
RT(18-26)
DNA(2601..2627)
Pol Epitope Map
Author Location RT(18-26)
Epitope GPKVKQWPL Epitope Alignment
GPKVKQWPL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58964

HXB2 Location Pol(262-270)
RT(107-115)
DNA(2868..2894)
Pol Epitope Map
Author Location Rev(107-115)
Epitope TVLDVGDAY Epitope Alignment
TVLDVGDAY epitope logo
Epitope Name TY9
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61030

HXB2 Location Pol(282-290)
RT(127-135)
DNA(2928..2954)
Pol Epitope Map
Author Location RT(127-135)
Epitope YTAFTIPSV Epitope Alignment
YTAFTIPSV epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61008

HXB2 Location Pol(311-319)
RT(156-164)
DNA(3015..3041)
Pol Epitope Map
Author Location RT(156-164)
Epitope SPAIFQSSM Epitope Alignment
SPAIFQSSM epitope logo
Subtype B
Species (MHC/HLA) human(B7)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702; 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61026

HXB2 Location Pol(336-344)
RT(181-189)
DNA(3090..3116)
Pol Epitope Map
Author Location RT(181-189)
Epitope YQYMDDLYV Epitope Alignment
YQYMDDLYV epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60990

HXB2 Location Pol(361-369)
RT(206-214)
DNA(3165..3191)
Pol Epitope Map
Author Location RT(206-214)
Epitope REHLLRWGF Epitope Alignment
REHLLRWGF epitope logo
Subtype B
Species (MHC/HLA) human(Cw*0702)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60962

HXB2 Location Pol(399-407)
RT(244-252)
DNA(3279..3305)
Pol Epitope Map
Author Location RT(244-252)
Epitope IVLPEKDSW Epitope Alignment
IVLPEKDSW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602; 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701; 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60986

HXB2 Location Pol(424-432)
RT(269-277)
DNA(3354..3380)
Pol Epitope Map
Author Location RT(269-277)
Epitope QIYAGIKVK Epitope Alignment
QIYAGIKVK epitope logo
Subtype B
Species (MHC/HLA) human(A*03, A*1101)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60961

HXB2 Location Pol(530-538)
RT(375-383)
DNA(3672..3698)
Pol Epitope Map
Author Location RT(375-383)
Epitope ITTESIVIW Epitope Alignment
ITTESIVIW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60992

HXB2 Location Pol(616-624)
RT(461-469)
DNA(3930..3956)
Pol Epitope Map
Author Location p15(21-29)
Epitope RGRQKVVSL Epitope Alignment
RGRQKVVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60989

HXB2 Location Pol(655-663)
RT(500-508)
DNA(4047..4073)
Pol Epitope Map
Author Location p15(60-68)
Epitope QYALGIIQA Epitope Alignment
QYALGIIQA epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60971

HXB2 Location Pol(672-680)
RT(517-525)
DNA(4098..4124)
Pol Epitope Map
Author Location p15(77-85)
Epitope LVSQIIEQL Epitope Alignment
LVSQIIEQL epitope logo
Subtype B
Species (MHC/HLA) human(A*0205)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60985

HXB2 Location Pol(675-683)
RT(520-528)
DNA(4107..4133)
Pol Epitope Map
Author Location RT(520-528)
Epitope QIIEQLIKK Epitope Alignment
QIIEQLIKK epitope logo
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60928

HXB2 Location Pol(725-734)
Integrase(10-19)
DNA(4257..4286)
Pol Epitope Map
Author Location Integrase(10-19)
Epitope EEHEKYHSNW Epitope Alignment
EEHEKYHSNW epitope logo
Subtype B
Species (MHC/HLA) human(B*4403)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601; 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60930

HXB2 Location Pol(726-734)
Integrase(11-19)
DNA(4260..4286)
Pol Epitope Map
Author Location Integrase(11-19)
Epitope EHEKYHNNW Epitope Alignment
EHEKYHNNW epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60983

HXB2 Location Pol(810-818)
Integrase(95-103)
DNA(4512..4538)
Pol Epitope Map
Author Location Integrase(95-103)
Epitope QETAYFILK Epitope Alignment
QETAYFILK epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60984

HXB2 Location Pol(810-819)
Integrase(95-104)
DNA(4512..4541)
Pol Epitope Map
Author Location Integrase(95-104)
Epitope QETAYFILKL Epitope Alignment
QETAYFILKL epitope logo
Subtype B
Species (MHC/HLA) human(A*6802)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60953

HXB2 Location Pol(829-838)
Integrase(114-123)
DNA(4569..4598)
Pol Epitope Map
Author Location Integrase(114-123)
Epitope HTDNGSNFTS Epitope Alignment
HTDNGSNFTS epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61009

HXB2 Location Pol(838-846)
Integrase(123-131)
DNA(4596..4622)
Pol Epitope Map
Author Location Integrase(838-846)
Epitope STTVKAACW Epitope Alignment
STTVKAACW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701)
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61010

HXB2 Location Pol(838-847)
Integrase(123-132)
DNA(4596..4625)
Pol Epitope Map
Author Location Integrase(123-132)
Epitope STTVKAACWW Epitope Alignment
STTVKAACWW epitope logo
Subtype B
Species (MHC/HLA) human(B57)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*0101, A*4801, B*4001, B*5701, Cw*0304, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61019

HXB2 Location Pol(880-888)
Integrase(165-173)
DNA(4722..4748)
Pol Epitope Map
Author Location Integrase(165-173)
Epitope VRDQAEHLK Epitope Alignment
VRDQAEHLK epitope logo
Subtype B
Species (MHC/HLA) human(A*0205)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58962

HXB2 Location Pol(901-909)
Integrase(186-194)
DNA(4785..4811)
Pol Epitope Map
Author Location Integrase(186-194)
Epitope KRKGGIGGY Epitope Alignment
KRKGGIGGY epitope logo
Epitope Name KY9
Subtype B
Species (MHC/HLA) human(B*2705)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701; 20786: A*0201, A*1101, B*2705, B*4002, Cw*0202, Cw*0202; 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61027

HXB2 Location Pol(942-950)
Integrase(227-235)
DNA(4908..4934)
Pol Epitope Map
Author Location Integrase(227-235)
Epitope YRDSRDPLW Epitope Alignment
YRDSRDPLW epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601; 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60993

HXB2 Location Pol(978-986)
Integrase(263-271)
DNA(5016..5042)
Pol Epitope Map
Author Location Integrase(263-271)
Epitope RKAKIIRDY Epitope Alignment
RKAKIIRDY epitope logo
Subtype B
Species (MHC/HLA) human(B*1503)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*0101, A*0202, B*0701, B*1503, Cw*0210, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60921

HXB2 Location Vif(61-69)
DNA(5221..5247)
Vif Epitope Map
Author Location Vif(61-69)
Epitope DARLVITTY Epitope Alignment
DARLVITTY epitope logo
Subtype B
Species (MHC/HLA) human(B*35, B*3501)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210; 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61022

HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGQGVSI Epitope Alignment
WHLGQGVSI epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61029

HXB2 Location Vif(94-102)
DNA(5320..5346)
Vif Epitope Map
Author Location Vif(94-102)
Epitope YSTQVDPDL Epitope Alignment
YSTQVDPDL epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*2401, A*2401, B*3502, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60945

HXB2 Location Vif(101-109)
DNA(5341..5367)
Vif Epitope Map
Author Location Vif(101-109)
Epitope GLADQLIHL Epitope Alignment
GLADQLIHL epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60968

HXB2 Location Vif(102-111)
DNA(5344..5373)
Vif Epitope Map
Author Location Vif(102-111)
Epitope LADQLIHLYY Epitope Alignment
LADQLIHLYY epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61005

HXB2 Location Vif(116-124)
DNA(5386..5412)
Vif Epitope Map
Author Location Vif(116-124)
Epitope SESAIRNAI Epitope Alignment
SESAIRNAI epitope logo
Subtype B
Species (MHC/HLA) human(B*4002)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60914

HXB2 Location Vif(149-157)
DNA(5485..5511)
Vif Epitope Map
Author Location Vif(149-157)
Epitope ALAALITPK Epitope Alignment
ALAALITPK epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60991

HXB2 Location Vpr(12-20)
DNA(5592..5618)
Vpr Epitope Map
Author Location Vpr(12-20)
Epitope REPYNEWTL Epitope Alignment
REPYNEWTL epitope logo
Subtype B
Species (MHC/HLA) human(B*4002)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501; 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61020

HXB2 Location Vpr(31-39)
DNA(5649..5675)
Vpr Epitope Map
Author Location Vpr(31-39)
Epitope VRHFPRIWL Epitope Alignment
VRHFPRIWL epitope logo
Subtype B
Species (MHC/HLA) human(B27)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701; 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60960

HXB2 Location Tat(39-47)
DNA(5945..5971)
Tat Epitope Map
Author Location Tat(39-47)
Epitope ITKGLGISY Epitope Alignment
ITKGLGISY epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60995

HXB2 Location Rev(66-75)
DNA(8498..8527)
Rev Epitope Map
Author Location Rev(66-75)
Epitope RPAEPVPLQL Epitope Alignment
RPAEPVPLQL epitope logo
Subtype B
Species (MHC/HLA) human(B7)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*0101, A*0202, B*0701, B*1503, Cw*0210, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60934

HXB2 Location gp160(32-40)
gp120(32-40)
DNA(6318..6344)
gp160 Epitope Map
Author Location gp160(32-40)
Epitope EKLWVTVYY Epitope Alignment
EKLWVTVYY epitope logo
Subtype B
Species (MHC/HLA) human(Cw*0602, Cw*0702)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61021

HXB2 Location gp160(44-52)
gp120(44-52)
DNA(6354..6380)
gp160 Epitope Map
Author Location gp160(44-52)
Epitope VWKDAETTL Epitope Alignment
VWKDAETTL epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*2401, A*2401, B*3502, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60939

HXB2 Location gp160(53-61)
gp120(53-61)
DNA(6381..6407)
gp160 Epitope Map
Author Location gp160(53-61)
Epitope FCASDAKSY Epitope Alignment
FCASDAKSY epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60925

HXB2 Location gp160(78-86)
gp120(78-86)
DNA(6456..6482)
gp160 Epitope Map
Author Location gp160(78-86)
Epitope DPNPQEVVL Epitope Alignment
DPNPQEVVL epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*2401, A*2401, B*3502, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60926

HXB2 Location gp160(78-86)
gp120(78-86)
DNA(6456..6482)
gp160 Epitope Map
Author Location gp160(78-86)
Epitope DPNPQEVVL Epitope Alignment
DPNPQEVVL epitope logo
Subtype B
Species (MHC/HLA) human(B*3502)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60976

HXB2 Location gp160(88-96)
gp120(88-96)
DNA(6486..6512)
gp160 Epitope Map
Author Location gp160(88-96)
Epitope NVTENFNMW Epitope Alignment
NVTENFNMW epitope logo
Subtype B
Species (MHC/HLA) human(A*2501)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60972

HXB2 Location gp160(104-112)
gp120(104-112)
DNA(6534..6560)
gp160 Epitope Map
Author Location gp160(104-112)
Epitope MHEDIISLW Epitope Alignment
MHEDIISLW epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601; 25327: A*2301, A*2601, B*3801, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60913

HXB2 Location gp160(200-208)
gp120(200-208)
DNA(6822..6848)
gp160 Epitope Map
Author Location gp160(200-208)
Epitope AITQACPKV Epitope Alignment
AITQACPKV epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61006

HXB2 Location gp160(209-217)
gp120(209-217)
DNA(6849..6875)
gp160 Epitope Map
Author Location gp160(209-217)
Epitope SFEPIPIHY Epitope Alignment
SFEPIPIHY epitope logo
Subtype B
Species (MHC/HLA) human(A*2902)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601; 41325: A*2902, A*3201, B*3501, B*4403, Cw*0401, Cw*1601
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61024

HXB2 Location gp160(217-226)
gp120(217-226)
DNA(6873..6902)
gp160 Epitope Map
Author Location gp160(217-226)
Epitope YCAPAGFAIL Epitope Alignment
YCAPAGFAIL epitope logo
Subtype B
Species (MHC/HLA) human(Cw*0102)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60997

HXB2 Location gp160(298-307)
gp120(298-307)
DNA(7116..7145)
gp160 Epitope Map
Author Location gp160(298-307)
Epitope RPNNNTRKSI Epitope Alignment
RPNNNTRKSI epitope logo
Subtype B
Species (MHC/HLA) human(B*0702)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60942

HXB2 Location gp160(376-384)
gp120(376-384)
DNA(7350..7376)
gp160 Epitope Map
Author Location gp160(376-384)
Epitope FNCGGEFFY Epitope Alignment
FNCGGEFFY epitope logo
Subtype B
Species (MHC/HLA) human(A29)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60937

HXB2 Location gp160(584-592)
gp41(73-81)
DNA(7974..8000)
gp160 Epitope Map
Author Location gp160(584-592)
Epitope ERYLRDQQL Epitope Alignment
ERYLRDQQL epitope logo
Subtype B
Species (MHC/HLA) human(B*14)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*2501, A*6801, B*1402, B*4401, Cw*0501, Cw*0802
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61011

HXB2 Location gp160(606-614)
gp41(95-103)
DNA(8040..8066)
gp160 Epitope Map
Author Location gp160(606-614)
Epitope TAVPWNASW Epitope Alignment
TAVPWNASW epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60974

HXB2 Location gp160(620-628)
gp41(109-117)
DNA(8082..8108)
gp160 Epitope Map
Author Location gp160(620-628)
Epitope NEIWDNMTW Epitope Alignment
NEIWDNMTW epitope logo
Subtype B
Species (MHC/HLA) human(B*4403)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*0101, A*2902, B*3801, B*4403, Cw*1203, Cw*1601
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60923

HXB2 Location gp160(621-629)
gp41(110-118)
DNA(8085..8111)
gp160 Epitope Map
Author Location gp160(621-629)
Epitope DIWDNMTWM Epitope Alignment
DIWDNMTWM epitope logo
Subtype B
Species (MHC/HLA) human(B*3503)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60931

HXB2 Location gp160(621-629)
gp41(110-118)
DNA(8085..8111)
gp160 Epitope Map
Author Location gp160(621-629)
Epitope EIWDNMTWL Epitope Alignment
EIWDNMTWL epitope logo
Subtype B
Species (MHC/HLA) human(B*3801)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*2401, A*2401, B*3502, B*3801, Cw*0401, Cw*1203
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60918

HXB2 Location gp160(700-708)
gp41(189-197)
DNA(8322..8348)
gp160 Epitope Map
Author Location gp160(700-708)
Epitope AVLSVVNRV Epitope Alignment
AVLSVVNRV epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61017

HXB2 Location gp160(704-712)
gp41(193-201)
DNA(8334..8360)
gp160 Epitope Map
Author Location gp160(704-712)
Epitope VINRVRQGY Epitope Alignment
VINRVRQGY epitope logo
Subtype B
Species (MHC/HLA) human(B*4403)
Immunogen HIV-1 infection
Patient MHC/HLA 75688: A*0201, A*3201, B*0801, B*5501, Cw*0303, Cw*0701; 41325: A*2902, A*3201, B*3501, B*4403, Cw*0401, Cw*1601
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60963

HXB2 Location gp160(777-785)
gp41(266-274)
DNA(8553..8579)
gp160 Epitope Map
Author Location gp160(777-785)
Epitope IVTRIVELL Epitope Alignment
IVTRIVELL epitope logo
Subtype B
Species (MHC/HLA) human(A*0205)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60949

HXB2 Location gp160(786-794)
gp41(275-283)
DNA(8580..8606)
gp160 Epitope Map
Author Location gp160(786-794)
Epitope GRRGWEALK Epitope Alignment
GRRGWEALK epitope logo
Subtype B
Species (MHC/HLA) human(B*2705)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*0201, A*0205, B*2705, B*4901, C*0202, C*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61000

HXB2 Location gp160(787-795)
gp41(276-284)
DNA(8583..8609)
gp160 Epitope Map
Author Location gp160(787-795)
Epitope RRGWEVLKY Epitope Alignment
RRGWEVLKY epitope logo
Subtype B
Species (MHC/HLA) human(A*0101)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60981

HXB2 Location gp160(805-814)
gp41(294-303)
DNA(8637..8666)
gp160 Epitope Map
Author Location gp160(805-814)
Epitope QELKNSAVSL Epitope Alignment
QELKNSAVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60982

HXB2 Location gp160(805-814)
gp41(294-303)
DNA(8637..8666)
gp160 Epitope Map
Author Location gp160(805-814)
Epitope QELKNSAVSL Epitope Alignment
QELKNSAVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*4001)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60969

HXB2 Location gp160(814-822)
gp41(303-311)
DNA(8664..8690)
gp160 Epitope Map
Author Location gp160(814-822)
Epitope LLNTTAIVV Epitope Alignment
LLNTTAIVV epitope logo
Subtype B
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60956

HXB2 Location gp160(836-845)
gp41(325-334)
DNA(8730..8759)
gp160 Epitope Map
Author Location gp160(836-845)
Epitope IGRAILHIPR Epitope Alignment
IGRAILHIPR epitope logo
Subtype B
Species (MHC/HLA) human(B*2705)
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*0101, A*0101, B*2705, B*5201, Cw*0201, Cw*1202
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60957

HXB2 Location gp160(843-851)
gp41(332-340)
DNA(8751..8777)
gp160 Epitope Map
Author Location gp160(843-851)
Epitope IPRRIRQGL Epitope Alignment
IPRRIRQGL epitope logo
Subtype B
Species (MHC/HLA) human(B*0702)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702; 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60998

HXB2 Location gp160(848-856)
gp41(337-345)
DNA(8766..8792)
gp160 Epitope Map
Author Location gp160(848-856)
Epitope RQGFERALL Epitope Alignment
RQGFERALL epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60999

HXB2 Location gp160(848-856)
gp41(337-345)
DNA(8766..8792)
gp160 Epitope Map
Author Location gp160(848-856)
Epitope RQGLERALL Epitope Alignment
RQGLERALL epitope logo
Subtype B
Species (MHC/HLA) human(B*08, B8)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701; 75688: A*0201, A*3201, B*0801, B*5501, Cw*0303, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60943

HXB2 Location Nef(68-76)
DNA(8998..9024)
Nef Epitope Map
Author Location Nef(68-76)
Epitope FPVKPQVPL Epitope Alignment
FPVKPQVPL epitope logo
Subtype B
Species (MHC/HLA) human(B35, B7)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701; 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60987

HXB2 Location Nef(73-82)
DNA(9013..9042)
Nef Epitope Map
Author Location Nef(73-82)
Epitope QVPLRPMTYK Epitope Alignment
QVPLRPMTYK epitope logo
Subtype B
Species (MHC/HLA) human(A*0301)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702; 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61018

HXB2 Location Nef(74-81)
DNA(9016..9039)
Nef Epitope Map
Author Location Nef(74-81)
Epitope VPLRPMTY Epitope Alignment
VPLRPMTY epitope logo
Subtype B
Species (MHC/HLA) human(B*3501)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60996

HXB2 Location Nef(77-85)
DNA(9025..9051)
Nef Epitope Map
Author Location Nef(77-85)
Epitope RPMTYKAAV Epitope Alignment
RPMTYKAAV epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*0201, A*0201, B*0701, B*4401, Cw*0702, Cw*0704
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60911

HXB2 Location Nef(83-91)
DNA(9043..9069)
Nef Epitope Map
Author Location Nef(83-91)
Epitope AAVDLSHFL Epitope Alignment
AAVDLSHFL epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60917

HXB2 Location Nef(84-92)
DNA(9046..9072)
Nef Epitope Map
Author Location Nef(84-92)
Epitope AVDLSHFLK Epitope Alignment
AVDLSHFLK epitope logo
Subtype B
Species (MHC/HLA) human(A*0301, A*1101)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60941

HXB2 Location Nef(90-97)
DNA(9064..9087)
Nef Epitope Map
Author Location Nef(90-97)
Epitope FLKEKGGL Epitope Alignment
FLKEKGGL epitope logo
Subtype B
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*0101, A*0301, B*0801, B*3503, Cw*0401, Cw*0701; 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702; 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701; 32645: A*0101, A*0201, B*0801, B*3503, Cw*0401, Cw*0701
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60964

HXB2 Location Nef(92-100)
DNA(9070..9096)
Nef Epitope Map
Author Location Nef(92-100)
Epitope KEKGGLEGL Epitope Alignment
KEKGGLEGL epitope logo
Subtype B
Species (MHC/HLA) human(B*4001)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*0201, A*0201, B*4001, B*4401, Cw*0304, Cw*0501; 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60966

HXB2 Location Nef(105-115)
DNA(9109..9141)
Nef Epitope Map
Author Location Nef(105-115)
Epitope KRQDILDLWVY Epitope Alignment
KRQDILDLWVY epitope logo
Subtype B
Species (MHC/HLA) human(Cw7)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*0101, A*0301, B*0701, B*3701, Cw*0602, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60954

HXB2 Location Nef(116-124)
DNA(9142..9168)
Nef Epitope Map
Author Location Nef(116-124)
Epitope HTQGYFPDW Epitope Alignment
HTQGYFPDW epitope logo
Subtype B
Species (MHC/HLA) human(B*5701, B57)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*2301, A*6801, B*3543, B*5703, Cw*0102, Cw*0210; 67200: A*0101, A*2401, B*0801, B*5701, Cw*0602, Cw*0701; 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61013

HXB2 Location Nef(128-137)
DNA(9178..9207)
Nef Epitope Map
Author Location Nef(128-137)
Epitope TPGPGVRYPL Epitope Alignment
TPGPGVRYPL epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA 41325: A*2902, A*3201, B*3501, B*4403, Cw*0401, Cw*1601; 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61002

HXB2 Location Nef(134-141)
DNA(9196..9219)
Nef Epitope Map
Author Location Nef(134-141)
Epitope RYPLTFGW Epitope Alignment
RYPLTFGW epitope logo
Subtype B
Species (MHC/HLA) human(A*2402)
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*0201, A*2401, B*4401, B*5701, Cw*0501, Cw*6002
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61003

HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLTFGWCF Epitope Alignment
RYPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(A*2402)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*2401, A*2401, B*3502, B*3801, Cw*0401, Cw*1203; 44149: A*0101, A*2401, B*0701, B*0801, Cw*0701, Cw*0702; 51729: A*2401, A*2401, B*3505, B*4001, C*0304, C*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61004

HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLTFGWCF Epitope Alignment
RYPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*0201, A*0201, B*1302, B*3501, Cw*0419, Cw*0602
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61025

HXB2 Location Nef(135-143)
DNA(9199..9225)
Nef Epitope Map
Author Location Nef(135-143)
Epitope YPLTFGWCF Epitope Alignment
YPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(B*5301)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60924

HXB2 Location Nef(175-183)
DNA(9319..9345)
Nef Epitope Map
Author Location Nef(175-183)
Epitope DPEKEVLVW Epitope Alignment
DPEKEVLVW epitope logo
Subtype B
Species (MHC/HLA) human(B*5301)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*0301, A*1101, B*3503, B*5301, Cw*0401, Cw*0401
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61023

HXB2 Location Nef(183-191)
DNA(9343..9369)
Nef Epitope Map
Author Location Nef(183-191)
Epitope WRFDSRLAF Epitope Alignment
WRFDSRLAF epitope logo
Subtype B
Species (MHC/HLA) human(B*1503)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*0101, A*0202, B*0701, B*1503, Cw*0210, Cw*0702
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


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