HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 125 matching records:

Displaying record number 60944

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HXB2 Location Gag(11-19)
p17(11-19)
DNA(820..846)
Gag Epitope Map
Author Location p17(11-19)
Epitope GELDRWEKI Epitope Alignment
GELDRWEKI epitope logo
Subtype B
Species (MHC/HLA) human(B*49:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61001

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HXB2 Location Gag(15-23)
p17(15-23)
DNA(832..858)
Gag Epitope Map
Author Location p17(15-23)
Epitope RWEKIRLRP Epitope Alignment
RWEKIRLRP epitope logo
Subtype B
Species (MHC/HLA) human(A*02:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60958

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HXB2 Location Gag(19-27)
p17(19-27)
DNA(844..870)
Gag Epitope Map
Author Location p17(19-27)
Epitope IRLRPGGKK Epitope Alignment
IRLRPGGKK epitope logo
Subtype B
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60994

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HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location p17(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Subtype B
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60967

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HXB2 Location Gag(28-36)
p17(28-36)
DNA(871..897)
Gag Epitope Map
Author Location p17(28-36)
Epitope KYKLKHIVW Epitope Alignment
KYKLKHIVW epitope logo
Subtype B
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60951

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HXB2 Location Gag(71-79)
p17(71-79)
DNA(1000..1026)
Gag Epitope Map
Author Location p17(71-79)
Epitope GTEELRSLY Epitope Alignment
GTEELRSLY epitope logo
Subtype B
Species (MHC/HLA) human(A*01:01)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02; 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60950

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HXB2 Location Gag(71-79)
p17(71-79)
DNA(1000..1026)
Gag Epitope Map
Author Location p17(71-79)
Epitope GSEELRSLY Epitope Alignment
GSEELRSLY epitope logo
Subtype B
Species (MHC/HLA) human(A*01:01, B*57)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60935

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HXB2 Location Gag(74-82)
p17(74-82)
DNA(1009..1035)
Gag Epitope Map
Author Location p17(74-82)
Epitope ELRSLYNTV Epitope Alignment
ELRSLYNTV epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61007

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HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location p17(77-85)
Epitope SLYNTVATL Epitope Alignment
SLYNTVATL epitope logo
Subtype B
Species (MHC/HLA) human(A*02:02)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*01:01, A*02:02, B*07:02, B*15:03, C*02:10, C*07:02; 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02; 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61016

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HXB2 Location Gag(81-89)
p17(81-89)
DNA(1030..1056)
Gag Epitope Map
Author Location p17(81-89)
Epitope TVATLYCVH Epitope Alignment
TVATLYCVH epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60916

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HXB2 Location Gag(83-91)
p17(83-91)
DNA(1036..1062)
Gag Epitope Map
Author Location p17(83-91)
Epitope ATLYCVHQR Epitope Alignment
ATLYCVHQR epitope logo
Subtype B
Species (MHC/HLA) human(A*11:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60919

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HXB2 Location Gag(87-95)
p17(87-95)
DNA(1048..1074)
Gag Epitope Map
Author Location p17(87-95)
Epitope CVHQRIEVK Epitope Alignment
CVHQRIEVK epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60920

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HXB2 Location Gag(87-95)
p17(87-95)
DNA(1048..1074)
Gag Epitope Map
Author Location p17(87-95)
Epitope CVHQRIEVK Epitope Alignment
CVHQRIEVK epitope logo
Subtype B
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60955

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HXB2 Location Gag(92-101)
p17(92-101)
DNA(1063..1092)
Gag Epitope Map
Author Location p17(92-101)
Epitope IEIKDTKEAL Epitope Alignment
IEIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B*40:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60922

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HXB2 Location Gag(93-101)
p17(93-101)
DNA(1066..1092)
Gag Epitope Map
Author Location p17(93-101)
Epitope DIKDTKEAL Epitope Alignment
DIKDTKEAL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60695

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HXB2 Location Gag(119-128)
p17(119-128)
DNA(1144..1173)
Gag Epitope Map
Author Location p17(119-128)
Epitope AADTGNSSQV Epitope Alignment
AADTGNSSQV epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60948

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HXB2 Location Gag(140-149)
p24(8-17)
DNA(1207..1236)
Gag Epitope Map
Author Location p24(8-17)
Epitope GQMVHQAISP Epitope Alignment
GQMVHQAISP epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60978

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HXB2 Location Gag(145-155)
p24(13-23)
DNA(1222..1254)
Gag Epitope Map
Author Location p24(13-23)
Epitope QAISPRTLNAW Epitope Alignment
QAISPRTLNAW epitope logo
Subtype B
Species (MHC/HLA) human(A*25:01)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60959

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HXB2 Location Gag(147-155)
p24(15-23)
DNA(1228..1254)
Gag Epitope Map
Author Location p24(15-23)
Epitope ISPRTLNAW Epitope Alignment
ISPRTLNAW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03; 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58963

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HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location p24(30-40)
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Epitope Name KF11
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03; 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10; 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60938

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HXB2 Location Gag(203-212)
p24(71-80)
DNA(1396..1425)
Gag Epitope Map
Author Location p24(71-80)
Epitope ETINEEAAEW Epitope Alignment
ETINEEAAEW epitope logo
Subtype B
Species (MHC/HLA) human(A*25:01)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60952

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HXB2 Location Gag(216-223)
p24(84-91)
DNA(1435..1458)
Gag Epitope Map
Author Location p24(84-91)
Epitope HPVHAGPI Epitope Alignment
HPVHAGPI epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61014

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HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24(108-117)
Epitope TSTLQEQIAW Epitope Alignment
TSTLQEQIAW epitope logo
Subtype B
Species (MHC/HLA) human(B*57, B*57:03)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10; 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61015

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HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24(108-117)
Epitope TSTLQEQIGW Epitope Alignment
TSTLQEQIGW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03; 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60973

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HXB2 Location Gag(250-258)
p24(118-126)
DNA(1537..1563)
Gag Epitope Map
Author Location p24(118-126)
Epitope MTSNPPIPV Epitope Alignment
MTSNPPIPV epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60977

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HXB2 Location Gag(254-262)
p24(122-130)
DNA(1549..1575)
Gag Epitope Map
Author Location p24(122-130)
Epitope PPIPVGDIY Epitope Alignment
PPIPVGDIY epitope logo
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60932

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HXB2 Location Gag(260-267)
p24(128-135)
DNA(1567..1590)
Gag Epitope Map
Author Location p24(128-135)
Epitope EIYKRWII Epitope Alignment
EIYKRWII epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 75688: A*02:01, A*32:01, B*08:01, B*55:01, C*03:03, C*07:01; 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02; 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60933

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HXB2 Location Gag(260-268)
p24(128-136)
DNA(1567..1593)
Gag Epitope Map
Author Location p24(128-136)
Epitope EIYKRWIIL Epitope Alignment
EIYKRWIIL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58961

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HXB2 Location Gag(263-272)
p24(131-140)
DNA(1576..1605)
Gag Epitope Map
Author Location p24(131-140)
Epitope KRWIILGLNK Epitope Alignment
KRWIILGLNK epitope logo
Epitope Name KK10
Subtype B
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01; 20786: A*02:01, A*11:01, B*27:05, B*40:02, C*02:02, C*02:02; 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61028

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HXB2 Location Gag(277-285)
p24(145-153)
DNA(1618..1644)
Gag Epitope Map
Author Location p24(145-153)
Epitope YSPVSILDI Epitope Alignment
YSPVSILDI epitope logo
Subtype B
Species (MHC/HLA) human(C*01:02)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60927

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HXB2 Location Gag(298-308)
p24(166-176)
DNA(1681..1713)
Gag Epitope Map
Author Location p24(166-176)
Epitope DRFYKTLRAEQ Epitope Alignment
DRFYKTLRAEQ epitope logo
Subtype B
Species (MHC/HLA) human(B*14:02)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60912

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HXB2 Location Gag(306-316)
p24(174-184)
DNA(1705..1737)
Gag Epitope Map
Author Location p24(174-184)
Epitope AEQASQDVKNW Epitope Alignment
AEQASQDVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*44:02)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60979

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HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location p24(176-184)
Epitope QASQDVKNW Epitope Alignment
QASQDVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*53:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60980

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HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location p24(176-184)
Epitope QASQEVKNW Epitope Alignment
QASQEVKNW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60975

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HXB2 Location Gag(327-334)
p24(195-202)
DNA(1768..1791)
Gag Epitope Map
Author Location p24(195-202)
Epitope NPDCKTIL Epitope Alignment
NPDCKTIL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01, B*35:03, B35)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01; 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01; 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60947

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HXB2 Location Gag(355-363)
p24(223-231)
DNA(1852..1878)
Gag Epitope Map
Author Location p24(223-231)
Epitope GPSHKARVL Epitope Alignment
GPSHKARVL epitope logo
Subtype B
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60988

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HXB2 Location Gag(369-377)
p2p7p1p6(6-14)
DNA(1894..1920)
Gag Epitope Map
Author Location p2p7p1p6(6-14)
Epitope QVTNSATIM Epitope Alignment
QVTNSATIM epitope logo
Subtype B
Species (MHC/HLA) human(B*35:03)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61012

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HXB2 Location Gag(427-434)
p2p7p1p6(64-71)
DNA(2068..2091)
Gag Epitope Map
Author Location p2p7p1p6(64-71)
Epitope TERQANFL Epitope Alignment
TERQANFL epitope logo
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA 20786: A*02:01, A*11:01, B*27:05, B*40:02, C*02:02, C*02:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60940

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HXB2 Location Gag(433-440)
p2p7p1p6(70-77)
DNA(2086..2109)
Gag Epitope Map
Author Location p2p7p1p6(70-77)
Epitope FLGKIWPS Epitope Alignment
FLGKIWPS epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G; 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60965

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HXB2 Location Gag(481-489)
p2p7p1p6(118-126)
DNA(2230..2256)
Gag Epitope Map
Author Location p6(33-41)
Epitope KELYPLASL Epitope Alignment
KELYPLASL epitope logo
Subtype B
Species (MHC/HLA) human(B*40)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01; 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60936

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HXB2 Location Gag(482-490)
p2p7p1p6(119-127)
DNA(2233..2259)
Gag Epitope Map
Author Location p2p7p1p6(119-127)
Epitope ELYPLASLR Epitope Alignment
ELYPLASLR epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60915

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HXB2 Location Pol(23-31)
Gag/Pol-TF(23-31)
DNA(2151..2177)
Pol Epitope Map
Author Location Pol(23-31)
Epitope ANSPTSREL Epitope Alignment
ANSPTSREL epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60929

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HXB2 Location Pol(90-98)
Protease(34-42)
DNA(2352..2378)
Pol Epitope Map
Author Location Protease(34-42)
Epitope EEMNLPGRW Epitope Alignment
EEMNLPGRW epitope logo
Subtype B
Species (MHC/HLA) human(B*44:03)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01; 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60970

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HXB2 Location Pol(132-140)
Protease(76-84)
DNA(2478..2504)
Pol Epitope Map
Author Location Protease(76-84)
Epitope LVGPTPVNI Epitope Alignment
LVGPTPVNI epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60946

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HXB2 Location Pol(173-181)
RT(18-26)
DNA(2601..2627)
Pol Epitope Map
Author Location RT(18-26)
Epitope GPKVKQWPL Epitope Alignment
GPKVKQWPL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58964

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HXB2 Location Pol(262-270)
RT(107-115)
DNA(2868..2894)
Pol Epitope Map
Author Location Rev(107-115)
Epitope TVLDVGDAY Epitope Alignment
TVLDVGDAY epitope logo
Epitope Name TY9
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61030

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HXB2 Location Pol(282-290)
RT(127-135)
DNA(2928..2954)
Pol Epitope Map
Author Location RT(127-135)
Epitope YTAFTIPSV Epitope Alignment
YTAFTIPSV epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61008

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HXB2 Location Pol(311-319)
RT(156-164)
DNA(3015..3041)
Pol Epitope Map
Author Location RT(156-164)
Epitope SPAIFQSSM Epitope Alignment
SPAIFQSSM epitope logo
Subtype B
Species (MHC/HLA) human(B7)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02; 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61026

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HXB2 Location Pol(336-344)
RT(181-189)
DNA(3090..3116)
Pol Epitope Map
Author Location RT(181-189)
Epitope YQYMDDLYV Epitope Alignment
YQYMDDLYV epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60990

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HXB2 Location Pol(361-369)
RT(206-214)
DNA(3165..3191)
Pol Epitope Map
Author Location RT(206-214)
Epitope REHLLRWGF Epitope Alignment
REHLLRWGF epitope logo
Subtype B
Species (MHC/HLA) human(C*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60962

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HXB2 Location Pol(399-407)
RT(244-252)
DNA(3279..3305)
Pol Epitope Map
Author Location RT(244-252)
Epitope IVLPEKDSW Epitope Alignment
IVLPEKDSW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03; 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01; 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60986

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HXB2 Location Pol(424-432)
RT(269-277)
DNA(3354..3380)
Pol Epitope Map
Author Location RT(269-277)
Epitope QIYAGIKVK Epitope Alignment
QIYAGIKVK epitope logo
Subtype B
Species (MHC/HLA) human(A*03, A*11:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60961

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HXB2 Location Pol(530-538)
RT(375-383)
DNA(3672..3698)
Pol Epitope Map
Author Location RT(375-383)
Epitope ITTESIVIW Epitope Alignment
ITTESIVIW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60992

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HXB2 Location Pol(616-624)
RT(461-469)
DNA(3930..3956)
Pol Epitope Map
Author Location p15(21-29)
Epitope RGRQKVVSL Epitope Alignment
RGRQKVVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60989

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HXB2 Location Pol(655-663)
RT(500-508)
DNA(4047..4073)
Pol Epitope Map
Author Location p15(60-68)
Epitope QYALGIIQA Epitope Alignment
QYALGIIQA epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60971

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HXB2 Location Pol(672-680)
RT(517-525)
DNA(4098..4124)
Pol Epitope Map
Author Location p15(77-85)
Epitope LVSQIIEQL Epitope Alignment
LVSQIIEQL epitope logo
Subtype B
Species (MHC/HLA) human(A*02:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60985

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HXB2 Location Pol(675-683)
RT(520-528)
DNA(4107..4133)
Pol Epitope Map
Author Location RT(520-528)
Epitope QIIEQLIKK Epitope Alignment
QIIEQLIKK epitope logo
Subtype B
Species (MHC/HLA) human(A*11:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60928

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HXB2 Location Pol(725-734)
Integrase(10-19)
DNA(4257..4286)
Pol Epitope Map
Author Location Integrase(10-19)
Epitope EEHEKYHSNW Epitope Alignment
EEHEKYHSNW epitope logo
Subtype B
Species (MHC/HLA) human(B*44:03)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01; 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60930

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HXB2 Location Pol(726-734)
Integrase(11-19)
DNA(4260..4286)
Pol Epitope Map
Author Location Integrase(11-19)
Epitope EHEKYHNNW Epitope Alignment
EHEKYHNNW epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60983

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HXB2 Location Pol(810-818)
Integrase(95-103)
DNA(4512..4538)
Pol Epitope Map
Author Location Integrase(95-103)
Epitope QETAYFILK Epitope Alignment
QETAYFILK epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60984

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HXB2 Location Pol(810-819)
Integrase(95-104)
DNA(4512..4541)
Pol Epitope Map
Author Location Integrase(95-104)
Epitope QETAYFILKL Epitope Alignment
QETAYFILKL epitope logo
Subtype B
Species (MHC/HLA) human(A*68:02)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60953

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HXB2 Location Pol(829-838)
Integrase(114-123)
DNA(4569..4598)
Pol Epitope Map
Author Location Integrase(114-123)
Epitope HTDNGSNFTS Epitope Alignment
HTDNGSNFTS epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61009

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HXB2 Location Pol(838-846)
Integrase(123-131)
DNA(4596..4622)
Pol Epitope Map
Author Location Integrase(838-846)
Epitope STTVKAACW Epitope Alignment
STTVKAACW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01)
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61010

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HXB2 Location Pol(838-847)
Integrase(123-132)
DNA(4596..4625)
Pol Epitope Map
Author Location Integrase(123-132)
Epitope STTVKAACWW Epitope Alignment
STTVKAACWW epitope logo
Subtype B
Species (MHC/HLA) human(B57)
Immunogen HIV-1 infection
Patient MHC/HLA 21746: A*01:01, A*68:01, B*40:01, B*57:01, C*03:04, C*06:02, DQB1*03:02, DQB1*03:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61019

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HXB2 Location Pol(880-888)
Integrase(165-173)
DNA(4722..4748)
Pol Epitope Map
Author Location Integrase(165-173)
Epitope VRDQAEHLK Epitope Alignment
VRDQAEHLK epitope logo
Subtype B
Species (MHC/HLA) human(A*02:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 58962

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HXB2 Location Pol(901-909)
Integrase(186-194)
DNA(4785..4811)
Pol Epitope Map
Author Location Integrase(186-194)
Epitope KRKGGIGGY Epitope Alignment
KRKGGIGGY epitope logo
Epitope Name KY9
Subtype B
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01; 20786: A*02:01, A*11:01, B*27:05, B*40:02, C*02:02, C*02:02; 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61027

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HXB2 Location Pol(942-950)
Integrase(227-235)
DNA(4908..4934)
Pol Epitope Map
Author Location Integrase(227-235)
Epitope YRDSRDPLW Epitope Alignment
YRDSRDPLW epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01; 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60993

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HXB2 Location Pol(978-986)
Integrase(263-271)
DNA(5016..5042)
Pol Epitope Map
Author Location Integrase(263-271)
Epitope RKAKIIRDY Epitope Alignment
RKAKIIRDY epitope logo
Subtype B
Species (MHC/HLA) human(B*15:03)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*01:01, A*02:02, B*07:02, B*15:03, C*02:10, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60921

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HXB2 Location Vif(61-69)
DNA(5221..5247)
Vif Epitope Map
Author Location Vif(61-69)
Epitope DARLVITTY Epitope Alignment
DARLVITTY epitope logo
Subtype B
Species (MHC/HLA) human(B*35, B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10; 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61022

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HXB2 Location Vif(79-87)
DNA(5275..5301)
Vif Epitope Map
Author Location Vif(79-87)
Epitope WHLGQGVSI Epitope Alignment
WHLGQGVSI epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61029

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HXB2 Location Vif(94-102)
DNA(5320..5346)
Vif Epitope Map
Author Location Vif(94-102)
Epitope YSTQVDPDL Epitope Alignment
YSTQVDPDL epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*24:02, B*35:02, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60945

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HXB2 Location Vif(101-109)
DNA(5341..5367)
Vif Epitope Map
Author Location Vif(101-109)
Epitope GLADQLIHL Epitope Alignment
GLADQLIHL epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60968

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HXB2 Location Vif(102-111)
DNA(5344..5373)
Vif Epitope Map
Author Location Vif(102-111)
Epitope LADQLIHLYY Epitope Alignment
LADQLIHLYY epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61005

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HXB2 Location Vif(116-124)
DNA(5386..5412)
Vif Epitope Map
Author Location Vif(116-124)
Epitope SESAIRNAI Epitope Alignment
SESAIRNAI epitope logo
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60914

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HXB2 Location Vif(149-157)
DNA(5485..5511)
Vif Epitope Map
Author Location Vif(149-157)
Epitope ALAALITPK Epitope Alignment
ALAALITPK epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60991

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HXB2 Location Vpr(12-20)
DNA(5592..5618)
Vpr Epitope Map
Author Location Vpr(12-20)
Epitope REPYNEWTL Epitope Alignment
REPYNEWTL epitope logo
Subtype B
Species (MHC/HLA) human(B*40:02)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01; 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61020

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HXB2 Location Vpr(31-39)
DNA(5649..5675)
Vpr Epitope Map
Author Location Vpr(31-39)
Epitope VRHFPRIWL Epitope Alignment
VRHFPRIWL epitope logo
Subtype B
Species (MHC/HLA) human(B27)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01; 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60960

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HXB2 Location Tat(39-47)
DNA(5945..5971)
Tat Epitope Map
Author Location Tat(39-47)
Epitope ITKGLGISY Epitope Alignment
ITKGLGISY epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60995

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HXB2 Location Rev(66-75)
DNA(8498..8527)
Rev Epitope Map
Author Location Rev(66-75)
Epitope RPAEPVPLQL Epitope Alignment
RPAEPVPLQL epitope logo
Subtype B
Species (MHC/HLA) human(B7)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*01:01, A*02:02, B*07:02, B*15:03, C*02:10, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60934

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HXB2 Location gp160(32-40)
gp120(32-40)
DNA(6318..6344)
gp160 Epitope Map
Author Location gp160(32-40)
Epitope EKLWVTVYY Epitope Alignment
EKLWVTVYY epitope logo
Subtype B
Species (MHC/HLA) human(C*06:02, C*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61021

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HXB2 Location gp160(44-52)
gp120(44-52)
DNA(6354..6380)
gp160 Epitope Map
Author Location gp160(44-52)
Epitope VWKDAETTL Epitope Alignment
VWKDAETTL epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*24:02, B*35:02, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60939

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HXB2 Location gp160(53-61)
gp120(53-61)
DNA(6381..6407)
gp160 Epitope Map
Author Location gp160(53-61)
Epitope FCASDAKSY Epitope Alignment
FCASDAKSY epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60925

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HXB2 Location gp160(78-86)
gp120(78-86)
DNA(6456..6482)
gp160 Epitope Map
Author Location gp160(78-86)
Epitope DPNPQEVVL Epitope Alignment
DPNPQEVVL epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*24:02, B*35:02, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60926

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HXB2 Location gp160(78-86)
gp120(78-86)
DNA(6456..6482)
gp160 Epitope Map
Author Location gp160(78-86)
Epitope DPNPQEVVL Epitope Alignment
DPNPQEVVL epitope logo
Subtype B
Species (MHC/HLA) human(B*35:02)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60976

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HXB2 Location gp160(88-96)
gp120(88-96)
DNA(6486..6512)
gp160 Epitope Map
Author Location gp160(88-96)
Epitope NVTENFNMW Epitope Alignment
NVTENFNMW epitope logo
Subtype B
Species (MHC/HLA) human(A*25:01)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60972

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HXB2 Location gp160(104-112)
gp120(104-112)
DNA(6534..6560)
gp160 Epitope Map
Author Location gp160(104-112)
Epitope MHEDIISLW Epitope Alignment
MHEDIISLW epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01; 25327: A*23:01, A*26:01, B*38:01, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60913

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HXB2 Location gp160(200-208)
gp120(200-208)
DNA(6822..6848)
gp160 Epitope Map
Author Location gp160(200-208)
Epitope AITQACPKV Epitope Alignment
AITQACPKV epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61006

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HXB2 Location gp160(209-217)
gp120(209-217)
DNA(6849..6875)
gp160 Epitope Map
Author Location gp160(209-217)
Epitope SFEPIPIHY Epitope Alignment
SFEPIPIHY epitope logo
Subtype B
Species (MHC/HLA) human(A*29:02)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01; 41325: A*29:02, A*32:01, B*35:01, B*44:03, C*04:01, C*16:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61024

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HXB2 Location gp160(217-226)
gp120(217-226)
DNA(6873..6902)
gp160 Epitope Map
Author Location gp160(217-226)
Epitope YCAPAGFAIL Epitope Alignment
YCAPAGFAIL epitope logo
Subtype B
Species (MHC/HLA) human(C*01:02)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60997

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HXB2 Location gp160(298-307)
gp120(298-307)
DNA(7116..7145)
gp160 Epitope Map
Author Location gp160(298-307)
Epitope RPNNNTRKSI Epitope Alignment
RPNNNTRKSI epitope logo
Subtype B
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60942

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HXB2 Location gp160(376-384)
gp120(376-384)
DNA(7350..7376)
gp160 Epitope Map
Author Location gp160(376-384)
Epitope FNCGGEFFY Epitope Alignment
FNCGGEFFY epitope logo
Subtype B
Species (MHC/HLA) human(A29)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60937

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HXB2 Location gp160(584-592)
gp41(73-81)
DNA(7974..8000)
gp160 Epitope Map
Author Location gp160(584-592)
Epitope ERYLRDQQL Epitope Alignment
ERYLRDQQL epitope logo
Subtype B
Species (MHC/HLA) human(B*14)
Immunogen HIV-1 infection
Patient MHC/HLA 94153: A*25:01, A*68:01, B*14:02, B*44:02, C*05:01, C*08:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61011

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HXB2 Location gp160(606-614)
gp41(95-103)
DNA(8040..8066)
gp160 Epitope Map
Author Location gp160(606-614)
Epitope TAVPWNASW Epitope Alignment
TAVPWNASW epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60974

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HXB2 Location gp160(620-628)
gp41(109-117)
DNA(8082..8108)
gp160 Epitope Map
Author Location gp160(620-628)
Epitope NEIWDNMTW Epitope Alignment
NEIWDNMTW epitope logo
Subtype B
Species (MHC/HLA) human(B*44:03)
Immunogen HIV-1 infection
Patient MHC/HLA 11439: A*01:01, A*29:02, B*38:01, B*44:03, C*12:03, C*16:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60923

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HXB2 Location gp160(621-629)
gp41(110-118)
DNA(8085..8111)
gp160 Epitope Map
Author Location gp160(621-629)
Epitope DIWDNMTWM Epitope Alignment
DIWDNMTWM epitope logo
Subtype B
Species (MHC/HLA) human(B*35:03)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60931

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HXB2 Location gp160(621-629)
gp41(110-118)
DNA(8085..8111)
gp160 Epitope Map
Author Location gp160(621-629)
Epitope EIWDNMTWL Epitope Alignment
EIWDNMTWL epitope logo
Subtype B
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*24:02, B*35:02, B*38:01, C*04:01, C*12:03
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60918

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HXB2 Location gp160(700-708)
gp41(189-197)
DNA(8322..8348)
gp160 Epitope Map
Author Location gp160(700-708)
Epitope AVLSVVNRV Epitope Alignment
AVLSVVNRV epitope logo
Subtype B
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61017

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HXB2 Location gp160(704-712)
gp41(193-201)
DNA(8334..8360)
gp160 Epitope Map
Author Location gp160(704-712)
Epitope VINRVRQGY Epitope Alignment
VINRVRQGY epitope logo
Subtype B
Species (MHC/HLA) human(B*44:03)
Immunogen HIV-1 infection
Patient MHC/HLA 75688: A*02:01, A*32:01, B*08:01, B*55:01, C*03:03, C*07:01; 41325: A*29:02, A*32:01, B*35:01, B*44:03, C*04:01, C*16:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60963

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HXB2 Location gp160(777-785)
gp41(266-274)
DNA(8553..8579)
gp160 Epitope Map
Author Location gp160(777-785)
Epitope IVTRIVELL Epitope Alignment
IVTRIVELL epitope logo
Subtype B
Species (MHC/HLA) human(A*02:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60949

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HXB2 Location gp160(786-794)
gp41(275-283)
DNA(8580..8606)
gp160 Epitope Map
Author Location gp160(786-794)
Epitope GRRGWEALK Epitope Alignment
GRRGWEALK epitope logo
Subtype B
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection
Patient MHC/HLA 53617: A*02:01, A*02:05, B*27:05, B*49:01, C*02:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61000

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HXB2 Location gp160(787-795)
gp41(276-284)
DNA(8583..8609)
gp160 Epitope Map
Author Location gp160(787-795)
Epitope RRGWEVLKY Epitope Alignment
RRGWEVLKY epitope logo
Subtype B
Species (MHC/HLA) human(A*01:01)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60981

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HXB2 Location gp160(805-814)
gp41(294-303)
DNA(8637..8666)
gp160 Epitope Map
Author Location gp160(805-814)
Epitope QELKNSAVSL Epitope Alignment
QELKNSAVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60982

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HXB2 Location gp160(805-814)
gp41(294-303)
DNA(8637..8666)
gp160 Epitope Map
Author Location gp160(805-814)
Epitope QELKNSAVSL Epitope Alignment
QELKNSAVSL epitope logo
Subtype B
Species (MHC/HLA) human(B*40:01)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60969

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HXB2 Location gp160(814-822)
gp41(303-311)
DNA(8664..8690)
gp160 Epitope Map
Author Location gp160(814-822)
Epitope LLNTTAIVV Epitope Alignment
LLNTTAIVV epitope logo
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60956

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HXB2 Location gp160(836-845)
gp41(325-334)
DNA(8730..8759)
gp160 Epitope Map
Author Location gp160(836-845)
Epitope IGRAILHIPR Epitope Alignment
IGRAILHIPR epitope logo
Subtype B
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection
Patient MHC/HLA 79379: A*01:01, B*27:05:02G, B*52:01:01G, C*02:02:02, C*12:02:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60957

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HXB2 Location gp160(843-851)
gp41(332-340)
DNA(8751..8777)
gp160 Epitope Map
Author Location gp160(843-851)
Epitope IPRRIRQGL Epitope Alignment
IPRRIRQGL epitope logo
Subtype B
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02; 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60998

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HXB2 Location gp160(848-856)
gp41(337-345)
DNA(8766..8792)
gp160 Epitope Map
Author Location gp160(848-856)
Epitope RQGFERALL Epitope Alignment
RQGFERALL epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60999

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HXB2 Location gp160(848-856)
gp41(337-345)
DNA(8766..8792)
gp160 Epitope Map
Author Location gp160(848-856)
Epitope RQGLERALL Epitope Alignment
RQGLERALL epitope logo
Subtype B
Species (MHC/HLA) human(B*08, B8)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01; 75688: A*02:01, A*32:01, B*08:01, B*55:01, C*03:03, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60943

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HXB2 Location Nef(68-76)
DNA(8998..9024)
Nef Epitope Map
Author Location Nef(68-76)
Epitope FPVKPQVPL Epitope Alignment
FPVKPQVPL epitope logo
Subtype B
Species (MHC/HLA) human(B35, B7)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01; 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60987

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HXB2 Location Nef(73-82)
DNA(9013..9042)
Nef Epitope Map
Author Location Nef(73-82)
Epitope QVPLRPMTYK Epitope Alignment
QVPLRPMTYK epitope logo
Subtype B
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02; 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61018

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HXB2 Location Nef(74-81)
DNA(9016..9039)
Nef Epitope Map
Author Location Nef(74-81)
Epitope VPLRPMTY Epitope Alignment
VPLRPMTY epitope logo
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60996

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HXB2 Location Nef(77-85)
DNA(9025..9051)
Nef Epitope Map
Author Location Nef(77-85)
Epitope RPMTYKAAV Epitope Alignment
RPMTYKAAV epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 63794: A*02:01:01G, B*07:02:01G, B*44:02:01G, C*07:04:01G
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60911

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HXB2 Location Nef(83-91)
DNA(9043..9069)
Nef Epitope Map
Author Location Nef(83-91)
Epitope AAVDLSHFL Epitope Alignment
AAVDLSHFL epitope logo
Subtype B
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60917

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HXB2 Location Nef(84-92)
DNA(9046..9072)
Nef Epitope Map
Author Location Nef(84-92)
Epitope AVDLSHFLK Epitope Alignment
AVDLSHFLK epitope logo
Subtype B
Species (MHC/HLA) human(A*03:01, A*11:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60941

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HXB2 Location Nef(90-97)
DNA(9064..9087)
Nef Epitope Map
Author Location Nef(90-97)
Epitope FLKEKGGL Epitope Alignment
FLKEKGGL epitope logo
Subtype B
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection
Patient MHC/HLA 71101: A*01:01, A*03:01, B*08:01, B*35:03, C*04:01, C*07:01; 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02; 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01; 32645: A*01:01, A*02:01, B*08:01, B*35:03, C*04:01, C*07:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60964

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HXB2 Location Nef(92-100)
DNA(9070..9096)
Nef Epitope Map
Author Location Nef(92-100)
Epitope KEKGGLEGL Epitope Alignment
KEKGGLEGL epitope logo
Subtype B
Species (MHC/HLA) human(B*40:01)
Immunogen HIV-1 infection
Patient MHC/HLA 98621: A*02:01:01G, B*40:01:01G, B*44:02:01G, C*03:04:01G, C*05:01; 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60966

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HXB2 Location Nef(105-115)
DNA(9109..9141)
Nef Epitope Map
Author Location Nef(105-115)
Epitope KRQDILDLWVY Epitope Alignment
KRQDILDLWVY epitope logo
Subtype B
Species (MHC/HLA) human(Cw7)
Immunogen HIV-1 infection
Patient MHC/HLA 25122: A*01:01, A*03:01, B*07:02, B*37:01, C*06:02, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60954

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HXB2 Location Nef(116-124)
DNA(9142..9168)
Nef Epitope Map
Author Location Nef(116-124)
Epitope HTQGYFPDW Epitope Alignment
HTQGYFPDW epitope logo
Subtype B
Species (MHC/HLA) human(B*57:01, B57)
Immunogen HIV-1 infection
Patient MHC/HLA 10849: A*23:01, A*68:01, B*35:43, B*57:03, C*01:02, C*02:10; 67200: A*01:01, A*24:02, B*08:01, B*57:01, C*06:02, C*07:01; 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61013

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HXB2 Location Nef(128-137)
DNA(9178..9207)
Nef Epitope Map
Author Location Nef(128-137)
Epitope TPGPGVRYPL Epitope Alignment
TPGPGVRYPL epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA 41325: A*29:02, A*32:01, B*35:01, B*44:03, C*04:01, C*16:01; 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61002

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HXB2 Location Nef(134-141)
DNA(9196..9219)
Nef Epitope Map
Author Location Nef(134-141)
Epitope RYPLTFGW Epitope Alignment
RYPLTFGW epitope logo
Subtype B
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA 44091: A*02:01:01G, A*24:02:01G, B*44:02:01G, B*57:01:01G, C*05
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61003

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HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLTFGWCF Epitope Alignment
RYPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(A*24:02)
Immunogen HIV-1 infection
Patient MHC/HLA 53653: A*24:02, B*35:02, B*38:01, C*04:01, C*12:03; 44149: A*01:01, A*24:02, B*07:01, B*08:01, C*07:01, C*07:02; 51729: A*24:02, A*24:02, B*35:05, B*40:01, C*03:04, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61004

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HXB2 Location Nef(134-143)
DNA(9196..9225)
Nef Epitope Map
Author Location Nef(134-143)
Epitope RYPLTFGWCF Epitope Alignment
RYPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 57604: A*02:01, A*02:01, B*13:02, B*35:01, C*04:19, C*06:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61025

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HXB2 Location Nef(135-143)
DNA(9199..9225)
Nef Epitope Map
Author Location Nef(135-143)
Epitope YPLTFGWCF Epitope Alignment
YPLTFGWCF epitope logo
Subtype B
Species (MHC/HLA) human(B*53:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 60924

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HXB2 Location Nef(175-183)
DNA(9319..9345)
Nef Epitope Map
Author Location Nef(175-183)
Epitope DPEKEVLVW Epitope Alignment
DPEKEVLVW epitope logo
Subtype B
Species (MHC/HLA) human(B*53:01)
Immunogen HIV-1 infection
Patient MHC/HLA 51314: A*03:01, A*11:01, B*35:03, B*53:01, C*04:01, C*04:01
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


Displaying record number 61023

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HXB2 Location Nef(183-191)
DNA(9343..9369)
Nef Epitope Map
Author Location Nef(183-191)
Epitope WRFDSRLAF Epitope Alignment
WRFDSRLAF epitope logo
Subtype B
Species (MHC/HLA) human(B*15:03)
Immunogen HIV-1 infection
Patient MHC/HLA 17543: A*01:01, A*02:02, B*07:02, B*15:03, C*02:10, C*07:02
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection

Notes

References

Kunwar2013 Pratima Kunwar, Natalie Hawkins, Warren L. Dinges, Yi Liu, Erin E. Gabriel, David A. Swan, Claire E. Stevens, Janine Maenza, Ann C. Collier, James I. Mullins, Tomer Hertz, Xuesong Yu, and Helen Horton. Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design. PLoS One, 8(5):e64405, 2013. PubMed ID: 23741326. Show all entries for this paper.


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