HIV molecular immunology database
Found 5 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(349-359) p24(217-227) DNA(1834..1866) |
Gag Epitope Map |
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Author Location | Gag(349-) | |
Epitope |
ACQGVGGPGHK
|
Epitope Alignment
|
Epitope Name | Gag349 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding | |
Keywords | rate of progression, immunodominance |
Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.
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HXB2 Location | Pol(675-683) RT(520-528) DNA(4107..4133) |
Pol Epitope Map |
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Author Location | Pol(675-) | |
Epitope |
QIIEQLIKK
|
Epitope Alignment
|
Epitope Name | Pol675 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding | |
Keywords | rate of progression |
Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(73-82) DNA(9013..9042) |
Nef Epitope Map |
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Author Location | Nef(73-) | |
Epitope |
QVPLRPMTYK
|
Epitope Alignment
|
Epitope Name | Nef73 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding | |
Keywords | rate of progression, immunodominance |
Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(84-92) DNA(9046..9072) |
Nef Epitope Map |
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Author Location | Nef(84-) | |
Epitope |
AVDLSHFLK
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | Nef84 | |
Subtype | B | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding | |
Keywords | rate of progression, immunodominance |
Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(84-92) DNA(9046..9072) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(84-) | |
Epitope |
ALDLSHFLK
|
Epitope Alignment
|
Show epitope variants | ||
Epitope Name | Nef84-2L | |
Subtype | B | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection | |
Country | Japan | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding | |
Keywords | rate of progression, immunodominance |
Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.