HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 5 matching records:

Displaying record number 57644

HXB2 Location Gag(349-359)
p24(217-227)
DNA(1834..1866)
Gag Epitope Map
Author Location Gag(349-)
Epitope ACQGVGGPGHK Epitope Alignment
ACQGVGGPGHK epitope logo
Epitope Name Gag349
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Country Japan
Experimental methods HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding
Keywords rate of progression, immunodominance

Notes

References

Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.


Displaying record number 57645

HXB2 Location Pol(675-683)
RT(520-528)
DNA(4107..4133)
Pol Epitope Map
Author Location Pol(675-)
Epitope QIIEQLIKK Epitope Alignment
QIIEQLIKK epitope logo
Epitope Name Pol675
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Country Japan
Experimental methods HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding
Keywords rate of progression

Notes

References

Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.


Displaying record number 57646

HXB2 Location Nef(73-82)
DNA(9013..9042)
Nef Epitope Map
Author Location Nef(73-)
Epitope QVPLRPMTYK Epitope Alignment
QVPLRPMTYK epitope logo
Epitope Name Nef73
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding
Keywords rate of progression, immunodominance

Notes

References

Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.


Displaying record number 57647

HXB2 Location Nef(84-92)
DNA(9046..9072)
Nef Epitope Map
Author Location Nef(84-)
Epitope AVDLSHFLK Epitope Alignment
AVDLSHFLK epitope logo
Show epitope variants
Epitope Name Nef84
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding
Keywords rate of progression, immunodominance

Notes

References

Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.


Displaying record number 57695

HXB2 Location Nef(84-92)
DNA(9046..9072)
Nef Epitope Map
Author Location Nef(84-)
Epitope ALDLSHFLK Epitope Alignment
ALDLSHFLK epitope logo
Show epitope variants
Epitope Name Nef84-2L
Subtype B
Species (MHC/HLA) human(A*1101)
Immunogen HIV-1 infection
Country Japan
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining, Relative replication capacity assay, Tetramer binding
Keywords rate of progression, immunodominance

Notes

References

Koizumi2010 Hirokazu Koizumi, Masao Hashimoto, Mamoru Fujiwara, Hayato Murakoshi, Takayuki Chikata, Mohamed Ali Borghan, Atsuko Hachiya, Yuka Kawashima, Hiroshi Takata, Takamasa Ueno, Shinichi Oka, and Masafumi Takiguchi. Different In Vivo Effects of HIV-1 Immunodominant Epitope-Specific Cytotoxic T Lymphocytes on Selection of Escape Mutant Viruses. J. Virol., 84(11):5508-5519, Jun 2010. PubMed ID: 20335254. Show all entries for this paper.


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