HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 15 matching records:

Displaying record number 61957

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HXB2 Location Gag(148-156)
p24(16-24)
DNA(1231..1257)
Gag Epitope Map
Author Location Gag(148-)
Epitope SPRTLNAWV Epitope Alignment
SPRTLNAWV epitope logo
Epitope Name AV9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection
Patient MHC/HLA 1127: A*02:02, A*30:02, B*07:05, B*18:01; 1214: A*02:01, A*34:02, B*44:03, B*82:01; 1224: A*30:01, B*15:03, B*42:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61947

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HXB2 Location Gag(150-158)
p24(18-26)
DNA(1237..1263)
Gag Epitope Map
Author Location Gag(150-)
Epitope RTLNAWVKV Epitope Alignment
RTLNAWVKV epitope logo
Epitope Name RV9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61948

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HXB2 Location Gag(433-440)
p2p7p1p6(70-77)
DNA(2086..2109)
Gag Epitope Map
Author Location Gag(433-)
Epitope FLGKIWPS Epitope Alignment
FLGKIWPS epitope logo
Epitope Name FS8
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61958

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HXB2 Location Pol(311-319)
RT(156-164)
DNA(3015..3041)
Pol Epitope Map
Author Location Pol(311-)
Epitope SPAIFQSSM Epitope Alignment
SPAIFQSSM epitope logo
Epitope Name SM9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(B*07:02, B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1127: A*02:02, A*30:02, B*07:05, B*18:01; 1214: A*02:01, A*34:02, B*44:03, B*82:01; 1224: A*30:01, B*15:03, B*42:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61952

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HXB2 Location Pol(313-321)
RT(158-166)
DNA(3021..3047)
Pol Epitope Map
Author Location Pol(973-)
Epitope AIFQSSMTK Epitope Alignment
AIFQSSMTK epitope logo
Epitope Name AK9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61959

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HXB2 Location Pol(592-600)
RT(437-445)
DNA(3858..3884)
Pol Epitope Map
Author Location Pol(592-)
Epitope AETFYVDGA Epitope Alignment
AETFYVDGA epitope logo
Epitope Name AA9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(B*45:01, B*50:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1108: ; 1115: A*02:01, A*68:01, B*50:01, B*58:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61949

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HXB2 Location Pol(606-614)
RT(451-459)
DNA(3900..3926)
Pol Epitope Map
Author Location Pol(606-)
Epitope KLGKAGYVT Epitope Alignment
KLGKAGYVT epitope logo
Epitope Name KT9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61946

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HXB2 Location Pol(934-942)
Integrase(219-227)
DNA(4884..4910)
Pol Epitope Map
Author Location Pol(934-)
Epitope KIQNFRVYY Epitope Alignment
KIQNFRVYY epitope logo
Epitope Name KY9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(A*03:01, A*11:01, A*29:02, A*30:01, A*30:02, A*32:01, A*80:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1213: A*30:01, A*30:02, B*07:02, B*58:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61951

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HXB2 Location Pol(973-981)
Integrase(258-266)
DNA(5001..5027)
Pol Epitope Map
Author Location Pol(973-)
Epitope KVVPRRKAK Epitope Alignment
KVVPRRKAK epitope logo
Epitope Name KK9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61954

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HXB2 Location Vif(23-31)
DNA(5107..5133)
Vif Epitope Map
Author Location Vif(23-)
Epitope SLVKHHMYI Epitope Alignment
SLVKHHMYI epitope logo
Epitope Name SI9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 1100: A*03:01, A*23:01, B*07:02, B*15:03; 1127: A*02:02, A*30:02, B*07:05, B*18:01; 1211: A*02:01, B*07:05, B*08:01; 1214: A*02:01, A*34:02, B*44:03, B*82:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61955

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HXB2 Location Vif(101-109)
DNA(5341..5367)
Vif Epitope Map
Author Location Vif(101-)
Epitope GLADQLIHM Epitope Alignment
GLADQLIHM epitope logo
Epitope Name GM9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 1100: A*03:01, A*23:01, B*07:02, B*15:03; 1127: A*02:02, A*30:02, B*07:05, B*18:01; 1211: A*02:01, B*07:05, B*08:01; 1214: A*02:01, A*34:02, B*44:03, B*82:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61953

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HXB2 Location Vpu(66-74)
DNA(6257..6283)
Vpu Epitope Map
Author Location Vpu(66-)
Epitope ALVEMGHHA Epitope Alignment
ALVEMGHHA epitope logo
Epitope Name AA9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 1100: A*03:01, A*23:01, B*07:02, B*15:03; 1127: A*02:02, A*30:02, B*07:05, B*18:01; 1211: A*02:01, B*07:05, B*08:01; 1214: A*02:01, A*34:02, B*44:03, B*82:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61950

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HXB2 Location gp160(67-75)
gp120(67-75)
DNA(6423..6449)
gp160 Epitope Map
Author Location Env(67-)
Epitope NVWATHACV Epitope Alignment
NVWATHACV epitope logo
Epitope Name NV9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human
Immunogen HIV-1 infection
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design, non-susceptible form

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61956

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HXB2 Location Nef(73-81)
DNA(9013..9039)
Nef Epitope Map
Author Location Nef(73-)
Epitope QVPLRPMTY Epitope Alignment
QVPLRPMTY epitope logo
Epitope Name QY9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(A*80:01)
Immunogen HIV-1 infection
Patient MHC/HLA 1213: A*30:01, A*30:02, B*07:02, B*58:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


Displaying record number 61960

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HXB2 Location Nef(107-115)
DNA(9115..9141)
Nef Epitope Map
Author Location Nef(107-)
Epitope QEILDLWVY Epitope Alignment
QEILDLWVY epitope logo
Epitope Name QY9
Subtype A3, B, C, CRF02_AG
Species (MHC/HLA) human(B*18:01, B*44:02)
Immunogen HIV-1 infection
Patient MHC/HLA 1108: ; 1115: A*02:01, A*68:01, B*50:01, B*58:01
Country Denmark, Guinea-Bissau
Experimental methods HLA binding, Intracellular cytokine staining, Tetramer binding
Keywords binding affinity, vaccine antigen design

Notes

References

Karlsson2012 Ingrid Karlsson, Henrik Kløverpris, Kristoffer Jarlov Jensen, Anette Stryhn, Søren Buus, Annika Karlsson, Lasse Vinner, Philip Goulder, and Anders Fomsgaard. Identification of Conserved Subdominant HIV Type 1 CD8+ T Cell Epitopes Restricted within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines. AIDS Res. Hum. Retroviruses, 28(11):1434-1443, Nov 2012. PubMed ID: 22747336. Show all entries for this paper.


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