HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 7 matching records:

Displaying record number 54582

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HXB2 Location Gag(135-143)
p24(3-11)
DNA(1192..1218)
Gag Epitope Map
Author Location Gag(135-143)
Epitope VQNLQGQMV Epitope Alignment
VQNLQGQMV epitope logo
Subtype B, C
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54585

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HXB2 Location Gag(226-236)
p24(94-104)
DNA(1465..1497)
Gag Epitope Map
Author Location Gag(226-236)
Epitope GQMREPRGSDI Epitope Alignment
GQMREPRGSDI epitope logo
Subtype B, C
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54583

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HXB2 Location Gag(429-437)
p2p7p1p6(66-74)
DNA(2074..2100)
Gag Epitope Map
Author Location Gag(429-437)
Epitope RQANFLGKI Epitope Alignment
RQANFLGKI epitope logo
Subtype B, C
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54586

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HXB2 Location Pol(113-122)
Protease(57-66)
DNA(2421..2450)
Pol Epitope Map
Author Location Pol(113-122)
Epitope RQYDQILIEI Epitope Alignment
RQYDQILIEI epitope logo
Subtype B
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54587

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HXB2 Location Pol(488-496)
RT(333-341)
DNA(3546..3572)
Pol Epitope Map
Author Location Pol(488-496)
Epitope GQGQWTYQI Epitope Alignment
GQGQWTYQI epitope logo
Subtype B
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54588

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HXB2 Location Rev(66-81)
DNA(8498..8545)
Rev Epitope Map
Author Location Rev(66-78)
Epitope RPAEPVPLQLPPIERL Epitope Alignment
RPAEPVPLQLPPIERL epitope logo
Subtype C
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


Displaying record number 54584

Download this epitope record as JSON.

HXB2 Location Nef(106-114)
DNA(9112..9138)
Nef Epitope Map
Author Location Nef(106-114)
Epitope RQDILDLWV Epitope Alignment
RQDILDLWV epitope logo
Subtype B, C
Species (MHC/HLA) human(B*13)
Immunogen HIV-1 infection
Patient MHC/HLA A*03:01, A*30:01, B*13:01, B*14:02, C*06:02, C*08:02
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining
Keywords epitope processing, escape, mutation acquisition, viral fitness and reversion, HLA associated polymorphism

Notes

References

Honeyborne2007 Isobella Honeyborne, Andrew Prendergast, Florencia Pereyra, Alasdair Leslie, Hayley Crawford, Rebecca Payne, Shabashini Reddy, Karen Bishop, Eshia Moodley, Kriebashnie Nair, Mary van der Stok, Noel McCarthy, Christine M. Rousseau, Marylyn Addo, James I. Mullins, Christian Brander, Photini Kiepiela, Bruce D. Walker, and Philip J. R. Goulder. Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes. J. Virol., 81(7):3667-3672, Apr 2007. PubMed ID: 17251285. Show all entries for this paper.


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