HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 7 matching records:

Displaying record number 55080

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HXB2 Location Gag(180-188)
p24(48-56)
DNA(1327..1353)
Gag Epitope Map
Author Location p24(48-56)
Epitope TPQDLNTML Epitope Alignment
TPQDLNTML epitope logo
Species (MHC/HLA) human(B*39:10)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55083

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HXB2 Location Gag(274-282)
p24(142-150)
DNA(1609..1635)
Gag Epitope Map
Author Location p24(142-150)
Epitope VRMYSPVSI Epitope Alignment
VRMYSPVSI epitope logo
Species (MHC/HLA) human(C*18:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55082

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HXB2 Location Gag(293-301)
p24(161-169)
DNA(1666..1692)
Gag Epitope Map
Author Location p24(161-169)
Epitope FRDYVDRFF Epitope Alignment
FRDYVDRFF epitope logo
Species (MHC/HLA) human(C*18:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55081

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HXB2 Location Pol(136-146)
Protease(80-90)
DNA(2490..2522)
Pol Epitope Map
Author Location Protease(80-90)
Epitope TPVNIIGRNML Epitope Alignment
TPVNIIGRNML epitope logo
Epitope Name TL11
Species (MHC/HLA) human(B*81:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55079

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HXB2 Location Pol(743-751)
Integrase(28-36)
DNA(4311..4337)
Pol Epitope Map
Author Location Integrase(28-36)
Epitope LPPIVAKEI Epitope Alignment
LPPIVAKEI epitope logo
Epitope Name LI9
Species (MHC/HLA) human(B*42:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55085

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HXB2 Location Pol(880-887)
Integrase(165-172)
DNA(4722..4745)
Pol Epitope Map
Author Location Integrase(165-172)
Epitope VRDQAEHL Epitope Alignment
VRDQAEHL epitope logo
Species (MHC/HLA) human(C*18:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


Displaying record number 55084

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HXB2 Location Vpu(5-13)
DNA(6074..6100)
Vpu Epitope Map
Author Location gp41(1-8)
Epitope YRLGVGALI Epitope Alignment
YRLGVGALI epitope logo
Subtype C
Species (MHC/HLA) human(C*18:01)
Immunogen peptide-HLA interaction
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ, HLA binding, Intracellular cytokine staining
Keywords optimal epitope

Notes

References

Honeyborne2006 Isobella Honeyborne, Almas Rathod, Rico Buchli, Dhanwanthie Ramduth, Eshia Moodley, Prinisha Rathnavalu, Senica Chetty, Cheryl Day, Christian Brander, William Hildebrand, Bruce D. Walker, Photini Kiepiela, and Philip J. R. Goulder. Motif Inference Reveals Optimal CTL Epitopes Presented by HLA Class I Alleles Highly Prevalent in Southern Africa. J. Immunol., 176(8):4699-4705, 15 Apr 2006. PubMed ID: 16585563. Show all entries for this paper.


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