HIV molecular immunology database
Found 13 matching records:
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HXB2 Location | Gag(147-155) p24(15-23) DNA(1228..1254) |
Gag Epitope Map |
---|---|---|
Author Location | p24(15-23) | |
Epitope |
ISPRTLNAW
|
Epitope Alignment
|
Epitope Name | IW9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | immunodominance, TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Gag(162-169) p24(30-37) DNA(1273..1296) |
Gag Epitope Map |
---|---|---|
Author Location | p24(30-37) | |
Epitope |
KAFSPEVI
|
Epitope Alignment
|
Epitope Name | K18 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Gag(162-172) p24(30-40) DNA(1273..1305) |
Gag Epitope Map |
---|---|---|
Author Location | p24(30-40) | |
Epitope |
KAFSPEVIPMF
|
Epitope Alignment
|
Epitope Name | KF11 | |
Species (MHC/HLA) | human(B*57:01, B*57:03) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ, Intracellular cytokine staining, Tetramer binding | |
Keywords | immunodominance, TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Gag(240-249) p24(108-117) DNA(1507..1536) |
Gag Epitope Map |
---|---|---|
Author Location | p24(108-118) | |
Epitope |
TSTLQEQIGW
|
Epitope Alignment
|
Epitope Name | TW10 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Gag(308-316) p24(176-184) DNA(1711..1737) |
Gag Epitope Map |
---|---|---|
Author Location | p24(176-184) | |
Epitope |
QASQEVKNW
|
Epitope Alignment
|
Epitope Name | QW10 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Pol(399-407) RT(244-252) DNA(3279..3305) |
Pol Epitope Map |
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Author Location | RT(244-252) | |
Epitope |
IVLPEKDSW
|
Epitope Alignment
|
Epitope Name | rtIW9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Pol(529-538) RT(374-383) DNA(3669..3698) |
Pol Epitope Map |
---|---|---|
Author Location | RT | |
Epitope |
KITTESIVIW
|
Epitope Alignment
|
Epitope Name | rtKW9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Pol(888-896) Integrase(173-181) DNA(4746..4772) |
Pol Epitope Map |
---|---|---|
Author Location | Integrase(173-181) | |
Epitope |
KTAVQMAVF
|
Epitope Alignment
|
Epitope Name | intKF9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Vif(31-39) DNA(5131..5157) |
Vif Epitope Map |
---|---|---|
Author Location | Vpr(31-39) | |
Epitope |
ISKKAKGWF
|
Epitope Alignment
|
Epitope Name | vifIF9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vpr(30-38) DNA(5646..5672) |
Vpr Epitope Map |
---|---|---|
Author Location | Vpr(30-38) | |
Epitope |
AVRHFPRIW
|
Epitope Alignment
|
Epitope Name | vprAV9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Rev(14-23) DNA(6009..6038) |
Rev Epitope Map |
---|---|---|
Author Location | Rev(14-23) | |
Epitope |
KAVRLIKFLY
|
Epitope Alignment
|
Epitope Name | revKY10 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Nef(116-125) DNA(9142..9171) |
Nef Epitope Map |
---|---|---|
Author Location | Nef(116-125) | |
Epitope |
HTQGYFPDWQ
|
Epitope Alignment
|
Epitope Name | nefHQ10 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.
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HXB2 Location | Nef(120-128) DNA(9154..9180) |
Nef Epitope Map |
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Author Location | Nef(120-128) | |
Epitope |
YFPDWQNYT
|
Epitope Alignment
|
Epitope Name | nefYT9 | |
Species (MHC/HLA) | human(B*57) | |
Immunogen | HIV-1 infection | |
Country | Kenya, United Kingdom | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | TCR usage, structure, characterizing CD8+ T cells |
Gillespie2006 Geraldine M. A. Gillespie, Guillaume Stewart-Jones, Jaya Rengasamy, Tara Beattie, Job J. Bwayo, Francis A. Plummer, Rupert Kaul, Andrew J. McMichael, Philippa Easterbrook, Tao Dong, E. Yvonne Jones, and Sarah L. Rowland-Jones. Strong TCR Conservation and Altered T Cell Cross-Reactivity Characterize a B*57-Restricted Immune Response in HIV-1 Infection. J. Immunol., 177(6):3893-3902, 15 Sep 2006. PubMed ID: 16951352. Show all entries for this paper.