HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 32 matching records:

Displaying record number 53687

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HXB2 Location Gag(22-31)
p17(22-31)
DNA(853..882)
Gag Epitope Map
Author Location p17
Epitope RPGGKKKYKL Epitope Alignment
RPGGKKKYKL epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(Cw4)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6; M12020: A*23, A*34, B*44, B*53, C*04, C*06
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53683

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HXB2 Location Gag(24-31)
p17(24-31)
DNA(859..882)
Gag Epitope Map
Author Location p17
Epitope GGKKKYKL Epitope Alignment
GGKKKYKL epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53684

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HXB2 Location Gag(71-79)
p17(71-79)
DNA(1000..1026)
Gag Epitope Map
Author Location p17
Epitope GSEELRSLY Epitope Alignment
GSEELRSLY epitope logo
Show epitope variants
Subtype B
Species (MHC/HLA) human(A1)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53685

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HXB2 Location Gag(74-82)
p17(74-82)
DNA(1009..1035)
Gag Epitope Map
Author Location p17
Epitope ELRSLYNTV Epitope Alignment
ELRSLYNTV epitope logo
Show epitope variants
Subtype B
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B55, B8, Cw3, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53691

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HXB2 Location Gag(78-85)
p17(78-85)
DNA(1021..1044)
Gag Epitope Map
Author Location p17
Epitope LYNTVATL Epitope Alignment
LYNTVATL epitope logo
Subtype D
Species (MHC/HLA) human(A24)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53698

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HXB2 Location Gag(85-92)
p17(85-92)
DNA(1042..1065)
Gag Epitope Map
Author Location p17
Epitope LYCVHQKI Epitope Alignment
LYCVHQKI epitope logo
Subtype D
Species (MHC/HLA) human(A24)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53675

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HXB2 Location Gag(147-155)
p24(15-23)
DNA(1228..1254)
Gag Epitope Map
Author Location p24
Epitope ISPRTLNAW Epitope Alignment
ISPRTLNAW epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53704

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HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location p24
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Subtype B, G
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06
Country Nigeria
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53679

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HXB2 Location Gag(179-190)
p24(47-58)
DNA(1324..1359)
Gag Epitope Map
Author Location p24
Epitope ATPQDLNTMLNT Epitope Alignment
ATPQDLNTMLNT epitope logo
Subtype B, D
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53705

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HXB2 Location Gag(180-191)
p24(48-59)
DNA(1327..1362)
Gag Epitope Map
Author Location p24
Epitope TPQDLNQMLNTV Epitope Alignment
TPQDLNQMLNTV epitope logo
Show epitope variants
Subtype B, G
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06
Country Nigeria
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53681

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HXB2 Location Gag(203-212)
p24(71-80)
DNA(1396..1425)
Gag Epitope Map
Author Location p24
Epitope ETINEEAAEW Epitope Alignment
ETINEEAAEW epitope logo
Show epitope variants
Subtype A, B, D
Species (MHC/HLA) human(B53, B58)
Immunogen HIV-1 infection
Patient MHC/HLA A36, A74, B53, B58, Cw4, Cw6; A23, A34, B44, B53, Cw4, Cw6; A23, A24, B35, B58, Cw4, Cw7; M12653: A*36, A*74, B*53, B*58, C*04, C*06; M12020: A*23, A*34, B*44, B*53, C*04, C*06
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53689

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HXB2 Location Gag(216-223)
p24(84-91)
DNA(1435..1458)
Gag Epitope Map
Author Location p24
Epitope HPVHAGPI Epitope Alignment
HPVHAGPI epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53690

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HXB2 Location Gag(221-228)
p24(89-96)
DNA(1450..1473)
Gag Epitope Map
Author Location p24
Epitope GPIAPGQM Epitope Alignment
GPIAPGQM epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53676

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HXB2 Location Gag(241-249)
p24(109-117)
DNA(1510..1536)
Gag Epitope Map
Author Location p24
Epitope STLQEQIGW Epitope Alignment
STLQEQIGW epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53677

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HXB2 Location Gag(254-262)
p24(122-130)
DNA(1549..1575)
Gag Epitope Map
Author Location p24
Epitope PPIPVGEIY Epitope Alignment
PPIPVGEIY epitope logo
Subtype B, D
Species (MHC/HLA) human(B35, B53)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53686

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HXB2 Location Gag(259-267)
p24(127-135)
DNA(1564..1590)
Gag Epitope Map
Author Location p24
Epitope GEIYKRWII Epitope Alignment
GEIYKRWII epitope logo
Subtype B, D
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53678

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HXB2 Location Gag(260-268)
p24(128-136)
DNA(1567..1593)
Gag Epitope Map
Author Location p24
Epitope EIYKRWIIL Epitope Alignment
EIYKRWIIL epitope logo
Subtype B, D
Species (MHC/HLA) human(A24)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53680

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HXB2 Location Gag(261-270)
p24(129-138)
DNA(1570..1599)
Gag Epitope Map
Author Location p24
Epitope IYKRWIILGL Epitope Alignment
IYKRWIILGL epitope logo
Subtype B, D
Species (MHC/HLA) human(A24)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53688

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HXB2 Location Gag(306-316)
p24(174-184)
DNA(1705..1737)
Gag Epitope Map
Author Location p24
Epitope AEQASQDVKNW Epitope Alignment
AEQASQDVKNW epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(B44)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6; M12020: A*23, A*34, B*44, B*53, C*04, C*06
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53674

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HXB2 Location Gag(308-316)
p24(176-184)
DNA(1711..1737)
Gag Epitope Map
Author Location p24
Epitope QASQEVKNW Epitope Alignment
QASQEVKNW epitope logo
Show epitope variants
Subtype B, D
Species (MHC/HLA) human(B53, Cw4)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7; A23, A34, B44, B53, Cw4, Cw6; M11814: A*23, A*24, B*35, B*58, C*04, C*07; M12020: A*23, A*34, B*44, B*53, C*04, C*06
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, variant cross-reactivity

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53692

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HXB2 Location Gag(355-363)
p24(223-231)
DNA(1852..1878)
Gag Epitope Map
Author Location p17
Epitope GPGHKARVL Epitope Alignment
GPGHKARVL epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53682

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HXB2 Location Gag(421-432)
p2p7p1p6(58-69)
DNA(2050..2085)
Gag Epitope Map
Author Location p24
Epitope HQMKDCNERQAN Epitope Alignment
HQMKDCNERQAN epitope logo
Show epitope variants
Subtype B, G
Species (MHC/HLA) human(A2)
Immunogen HIV-1 infection
Patient MHC/HLA A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06
Country Nigeria
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53699

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HXB2 Location Gag(454-463)
p2p7p1p6(91-100)
DNA(2149..2178)
Gag Epitope Map
Author Location p2p7p1p6
Epitope EPTAPPEESF Epitope Alignment
EPTAPPEESF epitope logo
Subtype D
Species (MHC/HLA) human(B35, B58)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53693

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HXB2 Location Gag(471-479)
p2p7p1p6(108-116)
DNA(2200..2226)
Gag Epitope Map
Author Location p2p7p1p6
Epitope TPSQKQEPI Epitope Alignment
TPSQKQEPI epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53700

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HXB2 Location Gag(471-479)
p2p7p1p6(108-116)
DNA(2200..2226)
Gag Epitope Map
Author Location p15
Epitope TPSQKQEPI Epitope Alignment
TPSQKQEPI epitope logo
Subtype D
Species (MHC/HLA) human(B53)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53701

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HXB2 Location Gag(476-484)
p2p7p1p6(113-121)
DNA(2215..2241)
Gag Epitope Map
Author Location p15
Epitope QEPIDKELY Epitope Alignment
QEPIDKELY epitope logo
Subtype D
Species (MHC/HLA) human(B44)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53694

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HXB2 Location Gag(477-486)
p2p7p1p6(114-123)
DNA(2218..2247)
Gag Epitope Map
Author Location p2p7p1p6
Epitope EPIDKELYPL Epitope Alignment
EPIDKELYPL epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53702

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HXB2 Location Gag(477-486)
p2p7p1p6(114-123)
DNA(2218..2247)
Gag Epitope Map
Author Location p15
Epitope EPIDKELYPL Epitope Alignment
EPIDKELYPL epitope logo
Subtype D
Species (MHC/HLA) human(B53)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53695

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HXB2 Location Gag(483-492)
p2p7p1p6(120-129)
DNA(2236..2265)
Gag Epitope Map
Author Location p2p7p1p6
Epitope LYPLASLRSL Epitope Alignment
LYPLASLRSL epitope logo
Subtype D
Species (MHC/HLA) human(A24)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53703

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HXB2 Location Gag(484-492)
p2p7p1p6(121-129)
DNA(2239..2265)
Gag Epitope Map
Author Location p15
Epitope YPLASLRSL Epitope Alignment
YPLASLRSL epitope logo
Subtype D
Species (MHC/HLA) human(B53)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A34, B44, B53, Cw4, Cw6
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53696

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HXB2 Location Gag(484-493)
p2p7p1p6(121-130)
DNA(2239..2268)
Gag Epitope Map
Author Location p2p7p1p6
Epitope YPLASLRSLF Epitope Alignment
YPLASLRSLF epitope logo
Subtype D
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


Displaying record number 53697

Download this epitope record as JSON.

HXB2 Location Gag(486-493)
p2p7p1p6(123-130)
DNA(2245..2268)
Gag Epitope Map
Author Location p2p7p1p6
Epitope LASLRSLF Epitope Alignment
LASLRSLF epitope logo
Subtype D
Species (MHC/HLA) human(B58)
Immunogen HIV-1 infection
Patient MHC/HLA A23, A24, B35, B58, Cw4, Cw7
Country Democratic Republic of the Congo
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords subtype comparisons, computational epitope prediction

Notes

References

Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.


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