HIV molecular immunology database
Found 32 matching records:
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HXB2 Location | Gag(22-31) p17(22-31) DNA(853..882) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
RPGGKKKYKL
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(Cw4) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6; M12020: A*23, A*34, B*44, B*53, C*04, C*06 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(24-31) p17(24-31) DNA(859..882) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
GGKKKYKL
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(B8) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(71-79) p17(71-79) DNA(1000..1026) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
GSEELRSLY
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B | |
Species (MHC/HLA) | human(A1) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(74-82) p17(74-82) DNA(1009..1035) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
ELRSLYNTV
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B | |
Species (MHC/HLA) | human(B8) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A1, A1, B55, B8, Cw3, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(78-85) p17(78-85) DNA(1021..1044) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
LYNTVATL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(85-92) p17(85-92) DNA(1042..1065) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
LYCVHQKI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(147-155) p24(15-23) DNA(1228..1254) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
ISPRTLNAW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(162-172) p24(30-40) DNA(1273..1305) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
KAFSPEVIPMF
|
Epitope Alignment
|
Subtype | B, G | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06 | |
Country | Nigeria | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(179-190) p24(47-58) DNA(1324..1359) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
ATPQDLNTMLNT
|
Epitope Alignment
|
Subtype | B, D | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(180-191) p24(48-59) DNA(1327..1362) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
TPQDLNQMLNTV
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, G | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06 | |
Country | Nigeria | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(203-212) p24(71-80) DNA(1396..1425) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
ETINEEAAEW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | A, B, D | |
Species (MHC/HLA) | human(B53, B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A36, A74, B53, B58, Cw4, Cw6; A23, A34, B44, B53, Cw4, Cw6; A23, A24, B35, B58, Cw4, Cw7; M12653: A*36, A*74, B*53, B*58, C*04, C*06; M12020: A*23, A*34, B*44, B*53, C*04, C*06 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(216-223) p24(84-91) DNA(1435..1458) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
HPVHAGPI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(221-228) p24(89-96) DNA(1450..1473) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
GPIAPGQM
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(241-249) p24(109-117) DNA(1510..1536) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
STLQEQIGW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(254-262) p24(122-130) DNA(1549..1575) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
PPIPVGEIY
|
Epitope Alignment
|
Subtype | B, D | |
Species (MHC/HLA) | human(B35, B53) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(259-267) p24(127-135) DNA(1564..1590) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
GEIYKRWII
|
Epitope Alignment
|
Subtype | B, D | |
Species (MHC/HLA) | human(B8) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A1, A1, B55, B8, Cw3, Cw7; M12259: A*01, B*08, B*55, C*03, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(260-268) p24(128-136) DNA(1567..1593) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
EIYKRWIIL
|
Epitope Alignment
|
Subtype | B, D | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(261-270) p24(129-138) DNA(1570..1599) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
IYKRWIILGL
|
Epitope Alignment
|
Subtype | B, D | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; M11814: A*23, A*24, B*35, B*58, C*04, C*07 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(306-316) p24(174-184) DNA(1705..1737) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
AEQASQDVKNW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(B44) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6; M12020: A*23, A*34, B*44, B*53, C*04, C*06 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(308-316) p24(176-184) DNA(1711..1737) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
QASQEVKNW
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, D | |
Species (MHC/HLA) | human(B53, Cw4) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7; A23, A34, B44, B53, Cw4, Cw6; M11814: A*23, A*24, B*35, B*58, C*04, C*07; M12020: A*23, A*34, B*44, B*53, C*04, C*06 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, variant cross-reactivity |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(355-363) p24(223-231) DNA(1852..1878) |
Gag Epitope Map |
---|---|---|
Author Location | p17 | |
Epitope |
GPGHKARVL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(421-432) p2p7p1p6(58-69) DNA(2050..2085) |
Gag Epitope Map |
---|---|---|
Author Location | p24 | |
Epitope |
HQMKDCNERQAN
|
Epitope Alignment
|
Show epitope variants | ||
Subtype | B, G | |
Species (MHC/HLA) | human(A2) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A2, A36, B45, B58, Cw3, Cw6; M13371: A*02, A*36, B*45, B*58, C*03, C*06 | |
Country | Nigeria | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
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HXB2 Location | Gag(454-463) p2p7p1p6(91-100) DNA(2149..2178) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
EPTAPPEESF
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35, B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(471-479) p2p7p1p6(108-116) DNA(2200..2226) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
TPSQKQEPI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(471-479) p2p7p1p6(108-116) DNA(2200..2226) |
Gag Epitope Map |
---|---|---|
Author Location | p15 | |
Epitope |
TPSQKQEPI
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B53) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(476-484) p2p7p1p6(113-121) DNA(2215..2241) |
Gag Epitope Map |
---|---|---|
Author Location | p15 | |
Epitope |
QEPIDKELY
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B44) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(477-486) p2p7p1p6(114-123) DNA(2218..2247) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
EPIDKELYPL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(477-486) p2p7p1p6(114-123) DNA(2218..2247) |
Gag Epitope Map |
---|---|---|
Author Location | p15 | |
Epitope |
EPIDKELYPL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B53) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(483-492) p2p7p1p6(120-129) DNA(2236..2265) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
LYPLASLRSL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(A24) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(484-492) p2p7p1p6(121-129) DNA(2239..2265) |
Gag Epitope Map |
---|---|---|
Author Location | p15 | |
Epitope |
YPLASLRSL
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B53) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A34, B44, B53, Cw4, Cw6 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(484-493) p2p7p1p6(121-130) DNA(2239..2268) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
YPLASLRSLF
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B35) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(486-493) p2p7p1p6(123-130) DNA(2245..2268) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6 | |
Epitope |
LASLRSLF
|
Epitope Alignment
|
Subtype | D | |
Species (MHC/HLA) | human(B58) | |
Immunogen | HIV-1 infection | |
Patient MHC/HLA | A23, A24, B35, B58, Cw4, Cw7 | |
Country | Democratic Republic of the Congo | |
Experimental methods | CD8 T-cell Elispot - IFNγ | |
Keywords | subtype comparisons, computational epitope prediction |
Geels2005 Mark J. Geels, Sheri A. Dubey, Kiersten Anderson, Elly Baan, Margreet Bakker, Georgios Pollakis, William A. Paxton, John W. Shiver, and Jaap Goudsmit. Broad Cross-Clade T-Cell Responses to Gag in Individuals Infected with Human Immunodeficiency Virus Type 1 Non-B Clades (A to G): Importance of HLA Anchor Residue Conservation. J. Virol., 79(17):11247-11258, Sep 2005. PubMed ID: 16103177. Show all entries for this paper.