HIV molecular immunology database
Found 40 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(169-178) p24(37-46) DNA(1294..1323) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
IPMFSALSEG
|
Epitope Alignment
|
Epitope Name | Gag1166 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(216-224) p24(84-92) DNA(1435..1461) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
HPVHAGPVA
|
Epitope Alignment
|
Epitope Name | Gag1156 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(253-261) p24(121-129) DNA(1546..1572) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
NPPIPVGEI
|
Epitope Alignment
|
Epitope Name | Gag1144 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(288-296) p24(156-164) DNA(1651..1677) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
GPKEPFRDY
|
Epitope Alignment
|
Epitope Name | Gag1164 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(355-363) p24(223-231) DNA(1852..1878) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
GPSHKARVL
|
Epitope Alignment
|
Epitope Name | Gag1150 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(452-460) p2p7p1p6(89-97) DNA(2143..2169) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
RPEPTAPPA
|
Epitope Alignment
|
Epitope Name | Gag1159 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(454-463) p2p7p1p6(91-100) DNA(2149..2178) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
EPTAPPAESF
|
Epitope Alignment
|
Epitope Name | Gag1162 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(457-465) p2p7p1p6(94-102) DNA(2158..2184) |
Gag Epitope Map |
---|---|---|
Author Location | Gag | |
Epitope |
APPAESFRF
|
Epitope Alignment
|
Epitope Name | Gag1147 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(94-103) Protease(38-47) DNA(2364..2393) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
LPGRWKPKMI
|
Epitope Alignment
|
Epitope Name | Pol1134 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(136-145) Protease(80-89) DNA(2490..2519) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
TPVNIIGRNL
|
Epitope Alignment
|
Epitope Name | Pol1151 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(249-257) RT(94-102) DNA(2829..2855) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
IPHPAGLKK
|
Epitope Alignment
|
Epitope Name | Pol1167 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(287-296) RT(132-141) DNA(2943..2972) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
IPSTNNETPG
|
Epitope Alignment
|
Epitope Name | Pol1165 | |
Subtype | A1 | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Country | United States | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(294-303) RT(139-148) DNA(2964..2993) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
TPGIRYQYNV
|
Epitope Alignment
|
Epitope Name | Pol1157 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(401-409) RT(246-254) DNA(3285..3311) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
LPEKDSWTV
|
Epitope Alignment
|
Epitope Name | Pol1145 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(426-434) RT(271-279) DNA(3360..3386) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
YPGIKVKQL
|
Epitope Alignment
|
Epitope Name | Pol1153 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(571-580) RT(416-425) DNA(3795..3824) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
FVNTPPLVKL
|
Epitope Alignment
|
Epitope Name | Pol1152 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(743-751) Integrase(28-36) DNA(4311..4337) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
LPPIVAKEI
|
Epitope Alignment
|
Epitope Name | Pol1130 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(856-865) Integrase(141-150) DNA(4650..4679) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
IPYNPQSQGV
|
Epitope Alignment
|
Epitope Name | Pol1128 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(947-956) Integrase(232-241) DNA(4923..4952) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
DPIWKGPAKL
|
Epitope Alignment
|
Epitope Name | Pol1143 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(975-983) Integrase(260-268) DNA(5007..5033) |
Pol Epitope Map |
---|---|---|
Author Location | Pol | |
Epitope |
VPRRKAKII
|
Epitope Alignment
|
Epitope Name | Pol1132 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(48-57) DNA(5182..5211) |
Vif Epitope Map |
---|---|---|
Author Location | Vif | |
Epitope |
HPRISSEVHI
|
Epitope Alignment
|
Epitope Name | Vif1136 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(57-65) DNA(5209..5235) |
Vif Epitope Map |
---|---|---|
Author Location | Vif | |
Epitope |
IPLGEAKLV
|
Epitope Alignment
|
Epitope Name | Vif1154 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(57-66) DNA(5209..5238) |
Vif Epitope Map |
---|---|---|
Author Location | Vif | |
Epitope |
IPLGDARLVI
|
Epitope Alignment
|
Epitope Name | Vif1135 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(155-163) DNA(5503..5529) |
Vif Epitope Map |
---|---|---|
Author Location | Vif | |
Epitope |
TPKKIKPPL
|
Epitope Alignment
|
Epitope Name | Vif1138 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(161-169) DNA(5521..5547) |
Vif Epitope Map |
---|---|---|
Author Location | Vif | |
Epitope |
PPLPSVRKL
|
Epitope Alignment
|
Epitope Name | Vif1155 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vpr(34-42) DNA(5658..5684) |
Vpr Epitope Map |
---|---|---|
Author Location | Vpr | |
Epitope |
FPRPWLHGL
|
Epitope Alignment
|
Epitope Name | Vpr1125 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Tat(2-11) DNA(5834..5863) |
Tat Epitope Map |
---|---|---|
Author Location | Tat | |
Epitope |
EPVDPNLEPW
|
Epitope Alignment
|
Epitope Name | Tat1140 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Tat(17-26) DNA(5879..5908) |
Tat Epitope Map |
---|---|---|
Author Location | Tat | |
Epitope |
QPKTACTNCY
|
Epitope Alignment
|
Epitope Name | Tat1160 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(75-84) gp120(75-84) DNA(6447..6476) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
VPTDPNPQEI
|
Epitope Alignment
|
Epitope Name | Env1129 | |
Subtype | C | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(123-132) gp120(123-132) DNA(6591..6620) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
TPLCVTLNCT
|
Epitope Alignment
|
Epitope Name | Env1148 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(213-221) gp120(213-221) DNA(6861..6887) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
IPIHYCAPA
|
Epitope Alignment
|
Epitope Name | Env1161 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(237-245) gp120(237-245) DNA(6933..6959) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
GPCTNVSTV
|
Epitope Alignment
|
Epitope Name | Env1158 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(298-307) gp120(298-307) DNA(7116..7145) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
RPNNNTRKSI
|
Epitope Alignment
|
Epitope Name | Env1146 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(713-721) gp41(202-210) DNA(8361..8387) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
SPLSFQTRL
|
Epitope Alignment
|
Epitope Name | Env1131 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | gp160(843-851) gp41(332-340) DNA(8751..8777) |
gp160 Epitope Map |
---|---|---|
Author Location | Env | |
Epitope |
IPRRIRQGL
|
Epitope Alignment
|
Epitope Name | Env1137 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(68-76) DNA(8998..9024) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
FPVRPQVPL
|
Epitope Alignment
|
Epitope Name | Nef1124 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(74-83) DNA(9016..9045) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
VPLRPMTYKA
|
Epitope Alignment
|
Epitope Name | Nef1163 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(128-137) DNA(9178..9207) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
TPGPGIRYPL
|
Epitope Alignment
|
Epitope Name | Nef1133 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(130-139) DNA(9184..9213) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
GPGTRFPLTR
|
Epitope Alignment
|
Epitope Name | Nef1139 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Nef(135-143) DNA(9199..9225) |
Nef Epitope Map |
---|---|---|
Author Location | Nef | |
Epitope |
YPLTFGWCF
|
Epitope Alignment
|
Epitope Name | Nef1127 | |
Subtype | B | |
Species (MHC/HLA) | human(B7) | |
Immunogen | HIV-1 infection | |
Experimental methods | CD8 T-cell Elispot - IFNγ, HLA binding | |
Keywords | binding affinity, computational epitope prediction, HLA associated polymorphism |
DeGroot2008 Anne S. De Groot, Daniel S. Rivera, Julie A. McMurry, Soren Buus, and William Martin. Identification of Immunogenic HLA-B7 ``Achilles' Heel'' Epitopes within Highly Conserved Regions of HIV. Vaccine, 26(24):3059-3071, 6 Jun 2008. PubMed ID: 18206276. Show all entries for this paper.